RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 RIMS2Q9UQ26 1411 aa18.33■□□□□ 0.53
CHMP2A-201ENST00000312547 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.52
CHMP2A-201ENST00000312547 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.52
CHMP2A-201ENST00000312547 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
CHMP2A-201ENST00000312547 MYO5BQ9ULV0 1848 aa18.31■□□□□ 0.52
CHMP2A-201ENST00000312547 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
CHMP2A-201ENST00000312547 LTKP29376 864 aa18.3■□□□□ 0.52
CHMP2A-201ENST00000312547 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
CHMP2A-201ENST00000312547 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHMP2A-201ENST00000312547 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
CHMP2A-201ENST00000312547 MYOM2P54296 1465 aa18.28■□□□□ 0.52
CHMP2A-201ENST00000312547 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-201ENST00000312547 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-201ENST00000312547 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
CHMP2A-201ENST00000312547 ANKLE2Q86XL3 938 aa18.28■□□□□ 0.52
CHMP2A-201ENST00000312547 VGFO15240 615 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-201ENST00000312547 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.52
CHMP2A-201ENST00000312547 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
CHMP2A-201ENST00000312547 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
CHMP2A-201ENST00000312547 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
CHMP2A-201ENST00000312547 PPLO60437 1756 aa18.26■□□□□ 0.51
CHMP2A-201ENST00000312547 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
CHMP2A-201ENST00000312547 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-201ENST00000312547 MED14O60244 1454 aa18.25■□□□□ 0.51
CHMP2A-201ENST00000312547 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
CHMP2A-201ENST00000312547 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
CHMP2A-201ENST00000312547 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
CHMP2A-201ENST00000312547 PPP1R15AO75807 674 aaPredicted RBP18.23■□□□□ 0.51
CHMP2A-201ENST00000312547 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
CHMP2A-201ENST00000312547 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
CHMP2A-201ENST00000312547 NPHP4O75161 1426 aaPredicted RBP18.21■□□□□ 0.51
CHMP2A-201ENST00000312547 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
CHMP2A-201ENST00000312547 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
CHMP2A-201ENST00000312547 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
CHMP2A-201ENST00000312547 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
CHMP2A-201ENST00000312547 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
CHMP2A-201ENST00000312547 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
CHMP2A-201ENST00000312547 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
CHMP2A-201ENST00000312547 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
CHMP2A-201ENST00000312547 IQGAP1P46940 1657 aa18.14■□□□□ 0.49
CHMP2A-201ENST00000312547 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
CHMP2A-201ENST00000312547 ALKQ9UM73 1620 aa18.13■□□□□ 0.49
CHMP2A-201ENST00000312547 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
CHMP2A-201ENST00000312547 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
CHMP2A-201ENST00000312547 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
CHMP2A-201ENST00000312547 BCANQ96GW7 911 aa18.12■□□□□ 0.49
CHMP2A-201ENST00000312547 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CHMP2A-201ENST00000312547 DIP2AQ14689 1571 aa18.12■□□□□ 0.49
CHMP2A-201ENST00000312547 METP08581 1390 aa18.1■□□□□ 0.49
CHMP2A-201ENST00000312547 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
CHMP2A-201ENST00000312547 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
CHMP2A-201ENST00000312547 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
CHMP2A-201ENST00000312547 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
CHMP2A-201ENST00000312547 LAMC1P11047 1609 aa18.09■□□□□ 0.49
CHMP2A-201ENST00000312547 ADGRB1O14514 1584 aa18.08■□□□□ 0.49
CHMP2A-201ENST00000312547 RALGAPBQ86X10 1494 aa18.08■□□□□ 0.49
CHMP2A-201ENST00000312547 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
CHMP2A-201ENST00000312547 KIAA1210Q9ULL0 1709 aa18.08■□□□□ 0.48
CHMP2A-201ENST00000312547 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
CHMP2A-201ENST00000312547 TRPM1Q7Z4N2 1603 aa18.07■□□□□ 0.48
CHMP2A-201ENST00000312547 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
CHMP2A-201ENST00000312547 PTPRUQ92729 1446 aa18.05■□□□□ 0.48
CHMP2A-201ENST00000312547 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
CHMP2A-201ENST00000312547 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
CHMP2A-201ENST00000312547 ILDR2Q71H61 639 aa18.03■□□□□ 0.48
CHMP2A-201ENST00000312547 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
CHMP2A-201ENST00000312547 TECPR2O15040 1411 aa18.02■□□□□ 0.48
CHMP2A-201ENST00000312547 KCNA6P17658 529 aa18.02■□□□□ 0.48
CHMP2A-201ENST00000312547 YTHDC2Q9H6S0 1430 aaKnown RBP18.02■□□□□ 0.48
CHMP2A-201ENST00000312547 NWD1Q149M9 1564 aa18■□□□□ 0.47
CHMP2A-201ENST00000312547 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
CHMP2A-201ENST00000312547 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
CHMP2A-201ENST00000312547 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
CHMP2A-201ENST00000312547 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
CHMP2A-201ENST00000312547 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 STK26Q9P289 416 aa17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 CHD2O14647 1828 aaKnown RBP17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 DLC1Q96QB1 1528 aa17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
CHMP2A-201ENST00000312547 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
CHMP2A-201ENST00000312547 ROBO2Q9HCK4 1378 aa17.96■□□□□ 0.47
CHMP2A-201ENST00000312547 CPS1P31327 1500 aa17.95■□□□□ 0.46
CHMP2A-201ENST00000312547 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
CHMP2A-201ENST00000312547 FAM135BQ49AJ0 1406 aa17.95■□□□□ 0.46
CHMP2A-201ENST00000312547 KNDC1Q76NI1 1749 aa17.94■□□□□ 0.46
CHMP2A-201ENST00000312547 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
CHMP2A-201ENST00000312547 USP47Q96K76 1375 aa17.91■□□□□ 0.46
CHMP2A-201ENST00000312547 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
CHMP2A-201ENST00000312547 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
CHMP2A-201ENST00000312547 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
CHMP2A-201ENST00000312547 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
CHMP2A-201ENST00000312547 LRRC7Q96NW7 1537 aa17.89■□□□□ 0.45
CHMP2A-201ENST00000312547 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
CHMP2A-201ENST00000312547 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-201ENST00000312547 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
CHMP2A-201ENST00000312547 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
CHMP2A-201ENST00000312547 POGKQ9P215 609 aa17.87■□□□□ 0.45
CHMP2A-201ENST00000312547 CENPJQ9HC77 1338 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms