RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 TRHP20396 242 aaPredicted RBP23.61■■□□□ 1.37
HOXC5-201ENST00000312492 NRXN1Q9ULB1 1477 aa23.61■■□□□ 1.37
HOXC5-201ENST00000312492 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
HOXC5-201ENST00000312492 ERVK-7P63135 1459 aa23.59■■□□□ 1.37
HOXC5-201ENST00000312492 SLC52A1Q9NWF4 448 aa23.59■■□□□ 1.37
HOXC5-201ENST00000312492 MLECQ14165 292 aa23.58■■□□□ 1.37
HOXC5-201ENST00000312492 ADGRF5Q8IZF2 1346 aa23.57■■□□□ 1.36
HOXC5-201ENST00000312492 POLR3GLQ9BT43 218 aa23.56■■□□□ 1.36
HOXC5-201ENST00000312492 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
HOXC5-201ENST00000312492 CCER2I3L3R5 266 aa23.55■■□□□ 1.36
HOXC5-201ENST00000312492 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
HOXC5-201ENST00000312492 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
HOXC5-201ENST00000312492 TMEM131LA2VDJ0 1609 aa23.54■■□□□ 1.36
HOXC5-201ENST00000312492 IDI1Q13907 227 aa23.54■■□□□ 1.36
HOXC5-201ENST00000312492 SPATA31D1Q6ZQQ2 1576 aa23.53■■□□□ 1.36
HOXC5-201ENST00000312492 ESF1Q9H501 851 aaKnown RBP23.52■■□□□ 1.36
HOXC5-201ENST00000312492 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
HOXC5-201ENST00000312492 FBXO31Q5XUX0 539 aaPredicted RBP23.51■■□□□ 1.35
HOXC5-201ENST00000312492 SETBP1Q9Y6X0 1596 aa23.5■■□□□ 1.35
HOXC5-201ENST00000312492 EIF3AQ14152 1382 aaKnown RBP23.5■■□□□ 1.35
HOXC5-201ENST00000312492 CFAP70Q5T0N1 1121 aa23.5■■□□□ 1.35
HOXC5-201ENST00000312492 TESK2Q96S53 571 aa23.49■■□□□ 1.35
HOXC5-201ENST00000312492 VGFO15240 615 aaPredicted RBP23.46■■□□□ 1.35
HOXC5-201ENST00000312492 TMF1P82094 1093 aa23.46■■□□□ 1.35
HOXC5-201ENST00000312492 DISP3Q9P2K9 1392 aa23.44■■□□□ 1.34
HOXC5-201ENST00000312492 ZMYM3Q14202 1370 aa23.44■■□□□ 1.34
HOXC5-201ENST00000312492 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
HOXC5-201ENST00000312492 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
HOXC5-201ENST00000312492 MYO3AQ8NEV4 1616 aa23.41■■□□□ 1.34
HOXC5-201ENST00000312492 PRKRIP1Q9H875 184 aaPredicted RBP23.41■■□□□ 1.34
HOXC5-201ENST00000312492 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
HOXC5-201ENST00000312492 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
HOXC5-201ENST00000312492 NUTM2DQ5VT03 806 aaPredicted RBP23.38■■□□□ 1.33
HOXC5-201ENST00000312492 A2ML1A8K2U0 1454 aa23.36■■□□□ 1.33
HOXC5-201ENST00000312492 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
HOXC5-201ENST00000312492 CDCA8Q53HL2 280 aa23.35■■□□□ 1.33
HOXC5-201ENST00000312492 FER1L4A9Z1Z3 1794 aa23.35■■□□□ 1.33
HOXC5-201ENST00000312492 KDM5AP29375 1690 aaKnown RBP23.34■■□□□ 1.33
HOXC5-201ENST00000312492 TNRQ92752 1358 aa23.32■■□□□ 1.32
HOXC5-201ENST00000312492 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
HOXC5-201ENST00000312492 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
HOXC5-201ENST00000312492 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
HOXC5-201ENST00000312492 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
HOXC5-201ENST00000312492 ARHGEF28Q8N1W1 1705 aaKnown RBP23.29■■□□□ 1.32
HOXC5-201ENST00000312492 C3P01024 1663 aa23.29■■□□□ 1.32
HOXC5-201ENST00000312492 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
HOXC5-201ENST00000312492 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
HOXC5-201ENST00000312492 MYOM1P52179 1685 aa23.27■■□□□ 1.32
HOXC5-201ENST00000312492 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
HOXC5-201ENST00000312492 KTN1Q86UP2 1357 aaKnown RBP23.26■■□□□ 1.31
HOXC5-201ENST00000312492 UBR1Q8IWV7 1749 aa23.26■■□□□ 1.31
HOXC5-201ENST00000312492 ALKQ9UM73 1620 aa23.25■■□□□ 1.31
HOXC5-201ENST00000312492 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
HOXC5-201ENST00000312492 PANK3Q9H999 370 aa23.23■■□□□ 1.31
HOXC5-201ENST00000312492 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
HOXC5-201ENST00000312492 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
HOXC5-201ENST00000312492 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.21■■□□□ 1.31
HOXC5-201ENST00000312492 PER1O15534 1290 aaPredicted RBP23.2■■□□□ 1.3
HOXC5-201ENST00000312492 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
HOXC5-201ENST00000312492 RALBP1Q15311 655 aa23.19■■□□□ 1.3
HOXC5-201ENST00000312492 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
HOXC5-201ENST00000312492 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
HOXC5-201ENST00000312492 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
HOXC5-201ENST00000312492 YTHDC2Q9H6S0 1430 aaKnown RBP23.18■■□□□ 1.3
HOXC5-201ENST00000312492 CEBPAP49715 358 aaPredicted RBP23.17■■□□□ 1.3
HOXC5-201ENST00000312492 NRXN3Q9Y4C0 1643 aa23.16■■□□□ 1.3
HOXC5-201ENST00000312492 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
HOXC5-201ENST00000312492 TMEM2Q9UHN6 1383 aa23.15■■□□□ 1.3
HOXC5-201ENST00000312492 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
HOXC5-201ENST00000312492 STK26Q9P289 416 aa23.15■■□□□ 1.3
HOXC5-201ENST00000312492 PTPRMP28827 1452 aa23.14■■□□□ 1.3
HOXC5-201ENST00000312492 RIMS1Q86UR5 1692 aaKnown RBP23.13■■□□□ 1.29
HOXC5-201ENST00000312492 TULP4Q9NRJ4 1543 aa23.11■■□□□ 1.29
HOXC5-201ENST00000312492 KNSTRNQ9Y448 316 aa23.11■■□□□ 1.29
HOXC5-201ENST00000312492 EVC2Q86UK5 1308 aa23.11■■□□□ 1.29
HOXC5-201ENST00000312492 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
HOXC5-201ENST00000312492 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
HOXC5-201ENST00000312492 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
HOXC5-201ENST00000312492 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
HOXC5-201ENST00000312492 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
HOXC5-201ENST00000312492 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
HOXC5-201ENST00000312492 TMC1Q8TDI8 760 aa23.08■■□□□ 1.28
HOXC5-201ENST00000312492 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.28
HOXC5-201ENST00000312492 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.28
HOXC5-201ENST00000312492 POGKQ9P215 609 aa23.07■■□□□ 1.28
HOXC5-201ENST00000312492 ADAMTSL3P82987 1691 aa23.06■■□□□ 1.28
HOXC5-201ENST00000312492 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
HOXC5-201ENST00000312492 PRAM1Q96QH2 718 aa23.06■■□□□ 1.28
HOXC5-201ENST00000312492 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
HOXC5-201ENST00000312492 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
HOXC5-201ENST00000312492 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
HOXC5-201ENST00000312492 SLIT1O75093 1534 aa23.04■■□□□ 1.28
HOXC5-201ENST00000312492 GTF3C3Q9Y5Q9 886 aa23.04■■□□□ 1.28
HOXC5-201ENST00000312492 NPC1L1Q9UHC9 1359 aa23.03■■□□□ 1.28
HOXC5-201ENST00000312492 AMER1Q5JTC6 1135 aaPredicted RBP23.03■■□□□ 1.28
HOXC5-201ENST00000312492 BCANQ96GW7 911 aa23.03■■□□□ 1.28
HOXC5-201ENST00000312492 PLEKHG1Q9ULL1 1385 aa23.02■■□□□ 1.28
HOXC5-201ENST00000312492 ARHGAP23Q9P227 1491 aa23.02■■□□□ 1.28
HOXC5-201ENST00000312492 ABCC11Q96J66 1382 aa23.02■■□□□ 1.28
HOXC5-201ENST00000312492 EID1Q9Y6B2 187 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms