RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
NPAS4-201ENST00000311034 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
NPAS4-201ENST00000311034 BECN1Q14457 450 aa17.41■□□□□ 0.38
NPAS4-201ENST00000311034 TPRNQ4KMQ1 711 aa17.41■□□□□ 0.38
NPAS4-201ENST00000311034 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
NPAS4-201ENST00000311034 A2MP01023 1474 aa17.4■□□□□ 0.38
NPAS4-201ENST00000311034 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
NPAS4-201ENST00000311034 CEP170Q5SW79 1584 aa17.39■□□□□ 0.37
NPAS4-201ENST00000311034 KDM5DQ9BY66 1539 aa17.38■□□□□ 0.37
NPAS4-201ENST00000311034 EIF4G3O43432 1585 aaKnown RBP17.38■□□□□ 0.37
NPAS4-201ENST00000311034 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
NPAS4-201ENST00000311034 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
NPAS4-201ENST00000311034 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
NPAS4-201ENST00000311034 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
NPAS4-201ENST00000311034 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
NPAS4-201ENST00000311034 SOX12O15370 315 aa17.37■□□□□ 0.37
NPAS4-201ENST00000311034 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
NPAS4-201ENST00000311034 E9PCH4 1651 aa17.36■□□□□ 0.37
NPAS4-201ENST00000311034 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
NPAS4-201ENST00000311034 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
NPAS4-201ENST00000311034 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
NPAS4-201ENST00000311034 PLEKHH2Q8IVE3 1493 aa17.35■□□□□ 0.37
NPAS4-201ENST00000311034 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
NPAS4-201ENST00000311034 PTPRGP23470 1445 aa17.35■□□□□ 0.37
NPAS4-201ENST00000311034 CDC42BPAQ5VT25 1732 aa17.35■□□□□ 0.37
NPAS4-201ENST00000311034 E9PSI1 815 aa17.34■□□□□ 0.37
NPAS4-201ENST00000311034 TNNQ9UQP3 1299 aa17.34■□□□□ 0.37
NPAS4-201ENST00000311034 MAGI2Q86UL8 1455 aa17.34■□□□□ 0.37
NPAS4-201ENST00000311034 PLA2R1Q13018 1463 aa17.34■□□□□ 0.37
NPAS4-201ENST00000311034 MORC1Q86VD1 984 aa17.33■□□□□ 0.37
NPAS4-201ENST00000311034 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.37
NPAS4-201ENST00000311034 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.36
NPAS4-201ENST00000311034 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
NPAS4-201ENST00000311034 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
NPAS4-201ENST00000311034 APBB1O00213 710 aa17.32■□□□□ 0.36
NPAS4-201ENST00000311034 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
NPAS4-201ENST00000311034 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
NPAS4-201ENST00000311034 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
NPAS4-201ENST00000311034 ADCY10Q96PN6 1610 aa17.3■□□□□ 0.36
NPAS4-201ENST00000311034 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
NPAS4-201ENST00000311034 NKTRP30414 1462 aaKnown RBP17.3■□□□□ 0.36
NPAS4-201ENST00000311034 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
NPAS4-201ENST00000311034 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
NPAS4-201ENST00000311034 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
NPAS4-201ENST00000311034 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
NPAS4-201ENST00000311034 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
NPAS4-201ENST00000311034 MAPK8IP3Q9UPT6 1336 aa17.28■□□□□ 0.36
NPAS4-201ENST00000311034 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
NPAS4-201ENST00000311034 FAM43AQ8N2R8 423 aa17.27■□□□□ 0.36
NPAS4-201ENST00000311034 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.36
NPAS4-201ENST00000311034 USP19O94966 1318 aa17.27■□□□□ 0.35
NPAS4-201ENST00000311034 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.35
NPAS4-201ENST00000311034 STAG3Q9UJ98 1225 aa17.27■□□□□ 0.35
NPAS4-201ENST00000311034 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.35
NPAS4-201ENST00000311034 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
NPAS4-201ENST00000311034 FBLN1P23142 703 aa17.26■□□□□ 0.35
NPAS4-201ENST00000311034 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
NPAS4-201ENST00000311034 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
NPAS4-201ENST00000311034 ABCA8O94911 1581 aa17.25■□□□□ 0.35
NPAS4-201ENST00000311034 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
NPAS4-201ENST00000311034 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
NPAS4-201ENST00000311034 RLBP1P12271 317 aa17.24■□□□□ 0.35
NPAS4-201ENST00000311034 MLECQ14165 292 aa17.24■□□□□ 0.35
NPAS4-201ENST00000311034 NUP160Q12769 1436 aa17.24■□□□□ 0.35
NPAS4-201ENST00000311034 PRDM15P57071 1507 aaPredicted RBP17.24■□□□□ 0.35
NPAS4-201ENST00000311034 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
NPAS4-201ENST00000311034 TBC1D2Q9BYX2 928 aa17.24■□□□□ 0.35
NPAS4-201ENST00000311034 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
NPAS4-201ENST00000311034 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
NPAS4-201ENST00000311034 TSR2Q969E8 191 aaKnown RBP17.23■□□□□ 0.35
NPAS4-201ENST00000311034 RRAGDQ9NQL2 400 aaPredicted RBP17.23■□□□□ 0.35
NPAS4-201ENST00000311034 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
NPAS4-201ENST00000311034 L1TD1Q5T7N2 865 aaKnown RBP17.23■□□□□ 0.35
NPAS4-201ENST00000311034 GOLGA6L3A6NEY3 463 aa17.22■□□□□ 0.35
NPAS4-201ENST00000311034 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
NPAS4-201ENST00000311034 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
NPAS4-201ENST00000311034 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
NPAS4-201ENST00000311034 PANK2Q9BZ23 570 aa17.21■□□□□ 0.35
NPAS4-201ENST00000311034 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
NPAS4-201ENST00000311034 INSRP06213 1382 aa17.21■□□□□ 0.34
NPAS4-201ENST00000311034 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.34
NPAS4-201ENST00000311034 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
NPAS4-201ENST00000311034 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
NPAS4-201ENST00000311034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
NPAS4-201ENST00000311034 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
NPAS4-201ENST00000311034 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
NPAS4-201ENST00000311034 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
NPAS4-201ENST00000311034 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
NPAS4-201ENST00000311034 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
NPAS4-201ENST00000311034 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
NPAS4-201ENST00000311034 MTHFSP49914 203 aa17.17■□□□□ 0.34
NPAS4-201ENST00000311034 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
NPAS4-201ENST00000311034 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
NPAS4-201ENST00000311034 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
NPAS4-201ENST00000311034 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
NPAS4-201ENST00000311034 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
NPAS4-201ENST00000311034 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
NPAS4-201ENST00000311034 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.34
NPAS4-201ENST00000311034 UBE2Q2Q8WVN8 375 aa17.14■□□□□ 0.34
NPAS4-201ENST00000311034 RUNDC1Q96C34 613 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms