RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 A2ML1A8K2U0 1454 aa17.74■□□□□ 0.43
VANGL1-201ENST00000310260 MYO3AQ8NEV4 1616 aa17.74■□□□□ 0.43
VANGL1-201ENST00000310260 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
VANGL1-201ENST00000310260 TXNDC2Q86VQ3 553 aa17.73■□□□□ 0.43
VANGL1-201ENST00000310260 L3MBTL2Q969R5 705 aa17.73■□□□□ 0.43
VANGL1-201ENST00000310260 CEP170BQ9Y4F5 1589 aaPredicted RBP17.72■□□□□ 0.43
VANGL1-201ENST00000310260 TONSLQ96HA7 1378 aa17.71■□□□□ 0.43
VANGL1-201ENST00000310260 EID1Q9Y6B2 187 aa17.71■□□□□ 0.43
VANGL1-201ENST00000310260 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
VANGL1-201ENST00000310260 LTKP29376 864 aa17.7■□□□□ 0.42
VANGL1-201ENST00000310260 RBM19Q9Y4C8 960 aaKnown RBP17.69■□□□□ 0.42
VANGL1-201ENST00000310260 KIF1BO60333 1816 aa17.69■□□□□ 0.42
VANGL1-201ENST00000310260 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
VANGL1-201ENST00000310260 SPATA31E1Q6ZUB1 1445 aa17.69■□□□□ 0.42
VANGL1-201ENST00000310260 ADGRB3O60242 1522 aa17.68■□□□□ 0.42
VANGL1-201ENST00000310260 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
VANGL1-201ENST00000310260 TMEM131LA2VDJ0 1609 aa17.68■□□□□ 0.42
VANGL1-201ENST00000310260 TMEM2Q9UHN6 1383 aa17.68■□□□□ 0.42
VANGL1-201ENST00000310260 MYO5BQ9ULV0 1848 aa17.68■□□□□ 0.42
VANGL1-201ENST00000310260 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
VANGL1-201ENST00000310260 FKBP8Q14318 412 aa17.68■□□□□ 0.42
VANGL1-201ENST00000310260 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
VANGL1-201ENST00000310260 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
VANGL1-201ENST00000310260 VGFO15240 615 aaPredicted RBP17.65■□□□□ 0.42
VANGL1-201ENST00000310260 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.65■□□□□ 0.42
VANGL1-201ENST00000310260 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
VANGL1-201ENST00000310260 RPGRIP1LQ68CZ1 1315 aa17.64■□□□□ 0.41
VANGL1-201ENST00000310260 SLC26A8Q96RN1 970 aa17.63■□□□□ 0.41
VANGL1-201ENST00000310260 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
VANGL1-201ENST00000310260 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
VANGL1-201ENST00000310260 SCAF11Q99590 1463 aaKnown RBP17.58■□□□□ 0.4
VANGL1-201ENST00000310260 NEXMIFQ5QGS0 1516 aa17.58■□□□□ 0.4
VANGL1-201ENST00000310260 MSH5O43196 834 aa17.58■□□□□ 0.4
VANGL1-201ENST00000310260 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
VANGL1-201ENST00000310260 SLIT1O75093 1534 aa17.57■□□□□ 0.4
VANGL1-201ENST00000310260 ARHGAP23Q9P227 1491 aa17.57■□□□□ 0.4
VANGL1-201ENST00000310260 NBPF8Q3BBV2 869 aa17.56■□□□□ 0.4
VANGL1-201ENST00000310260 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
VANGL1-201ENST00000310260 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
VANGL1-201ENST00000310260 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
VANGL1-201ENST00000310260 NPHP4O75161 1426 aaPredicted RBP17.53■□□□□ 0.4
VANGL1-201ENST00000310260 STK26Q9P289 416 aa17.53■□□□□ 0.4
VANGL1-201ENST00000310260 NEFLP07196 543 aa17.52■□□□□ 0.4
VANGL1-201ENST00000310260 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.4
VANGL1-201ENST00000310260 PPLO60437 1756 aa17.52■□□□□ 0.4
VANGL1-201ENST00000310260 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.4
VANGL1-201ENST00000310260 STAC3Q96MF2 364 aa17.52■□□□□ 0.4
VANGL1-201ENST00000310260 NEURL4Q96JN8 1562 aa17.51■□□□□ 0.39
VANGL1-201ENST00000310260 C14orf93Q9H972 538 aaKnown RBP17.49■□□□□ 0.39
VANGL1-201ENST00000310260 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
VANGL1-201ENST00000310260 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
VANGL1-201ENST00000310260 STRCQ7RTU9 1775 aa17.48■□□□□ 0.39
VANGL1-201ENST00000310260 MYOM2P54296 1465 aa17.48■□□□□ 0.39
VANGL1-201ENST00000310260 PIK3C2GO75747 1445 aa17.48■□□□□ 0.39
VANGL1-201ENST00000310260 TBX22Q9Y458 520 aa17.47■□□□□ 0.39
VANGL1-201ENST00000310260 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
VANGL1-201ENST00000310260 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
VANGL1-201ENST00000310260 METP08581 1390 aa17.47■□□□□ 0.39
VANGL1-201ENST00000310260 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.38
VANGL1-201ENST00000310260 ADAMTS13Q76LX8 1427 aa17.46■□□□□ 0.38
VANGL1-201ENST00000310260 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
VANGL1-201ENST00000310260 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
VANGL1-201ENST00000310260 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
VANGL1-201ENST00000310260 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
VANGL1-201ENST00000310260 MED14O60244 1454 aa17.45■□□□□ 0.38
VANGL1-201ENST00000310260 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
VANGL1-201ENST00000310260 IQGAP1P46940 1657 aa17.44■□□□□ 0.38
VANGL1-201ENST00000310260 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
VANGL1-201ENST00000310260 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
VANGL1-201ENST00000310260 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
VANGL1-201ENST00000310260 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
VANGL1-201ENST00000310260 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
VANGL1-201ENST00000310260 KCNA6P17658 529 aa17.41■□□□□ 0.38
VANGL1-201ENST00000310260 SETBP1Q9Y6X0 1596 aa17.4■□□□□ 0.38
VANGL1-201ENST00000310260 PRKCSHP14314 528 aaPredicted RBP17.4■□□□□ 0.38
VANGL1-201ENST00000310260 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
VANGL1-201ENST00000310260 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
VANGL1-201ENST00000310260 WAPLQ7Z5K2 1190 aa17.38■□□□□ 0.37
VANGL1-201ENST00000310260 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
VANGL1-201ENST00000310260 PTPRUQ92729 1446 aa17.38■□□□□ 0.37
VANGL1-201ENST00000310260 PROSER2Q86WR7 435 aaPredicted RBP17.37■□□□□ 0.37
VANGL1-201ENST00000310260 POGKQ9P215 609 aa17.37■□□□□ 0.37
VANGL1-201ENST00000310260 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
VANGL1-201ENST00000310260 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
VANGL1-201ENST00000310260 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
VANGL1-201ENST00000310260 TRPM1Q7Z4N2 1603 aa17.34■□□□□ 0.37
VANGL1-201ENST00000310260 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
VANGL1-201ENST00000310260 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.37
VANGL1-201ENST00000310260 LRPPRCP42704 1394 aaKnown RBP17.33■□□□□ 0.37
VANGL1-201ENST00000310260 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
VANGL1-201ENST00000310260 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
VANGL1-201ENST00000310260 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
VANGL1-201ENST00000310260 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
VANGL1-201ENST00000310260 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
VANGL1-201ENST00000310260 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
VANGL1-201ENST00000310260 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
VANGL1-201ENST00000310260 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
VANGL1-201ENST00000310260 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
VANGL1-201ENST00000310260 LAMC1P11047 1609 aa17.3■□□□□ 0.36
VANGL1-201ENST00000310260 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms