RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
KLHL3-201ENST00000309755 SASS6Q6UVJ0 657 aa13.5□□□□□ -0.25
KLHL3-201ENST00000309755 NASPP49321 788 aaPredicted RBP13.5□□□□□ -0.25
KLHL3-201ENST00000309755 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
KLHL3-201ENST00000309755 FOSBP53539 338 aa13.5□□□□□ -0.25
KLHL3-201ENST00000309755 DZIP1LQ8IYY4 767 aaKnown RBP13.5□□□□□ -0.25
KLHL3-201ENST00000309755 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
KLHL3-201ENST00000309755 NUCB2P80303 420 aa13.49□□□□□ -0.25
KLHL3-201ENST00000309755 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
KLHL3-201ENST00000309755 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
KLHL3-201ENST00000309755 MRE11P49959 708 aa13.49□□□□□ -0.25
KLHL3-201ENST00000309755 CHMP4CQ96CF2 233 aa13.49□□□□□ -0.25
KLHL3-201ENST00000309755 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 USP47Q96K76 1375 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 TRIM29Q14134 588 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 LNPKQ9C0E8 428 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 SMC3Q9UQE7 1217 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 RNF214Q8ND24 703 aa13.48□□□□□ -0.25
KLHL3-201ENST00000309755 G3V3G9 751 aa13.47□□□□□ -0.25
KLHL3-201ENST00000309755 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
KLHL3-201ENST00000309755 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
KLHL3-201ENST00000309755 CCDC39Q9UFE4 941 aa13.47□□□□□ -0.25
KLHL3-201ENST00000309755 ARGLU1Q9NWB6 273 aaPredicted RBP13.46□□□□□ -0.25
KLHL3-201ENST00000309755 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.25
KLHL3-201ENST00000309755 EIF2S2P20042 333 aaKnown RBP13.46□□□□□ -0.26
KLHL3-201ENST00000309755 NGEFQ8N5V2 710 aa13.46□□□□□ -0.26
KLHL3-201ENST00000309755 FHOD3Q2V2M9 1422 aa13.46□□□□□ -0.26
KLHL3-201ENST00000309755 CPLX2Q6PUV4 134 aaKnown RBP13.46□□□□□ -0.26
KLHL3-201ENST00000309755 CPLX1O14810 134 aa13.45□□□□□ -0.26
KLHL3-201ENST00000309755 ANKRD20A12PQ8NF67 263 aa13.45□□□□□ -0.26
KLHL3-201ENST00000309755 TRAK2O60296 914 aa13.45□□□□□ -0.26
KLHL3-201ENST00000309755 IFIT2P09913 472 aaKnown RBP13.45□□□□□ -0.26
KLHL3-201ENST00000309755 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
KLHL3-201ENST00000309755 CARMIL2Q6F5E8 1435 aa13.45□□□□□ -0.26
KLHL3-201ENST00000309755 RUFY1Q96T51 708 aa13.44□□□□□ -0.26
KLHL3-201ENST00000309755 C9orf78Q9NZ63 289 aaPredicted RBP13.44□□□□□ -0.26
KLHL3-201ENST00000309755 NOM1Q5C9Z4 860 aaKnown RBP13.44□□□□□ -0.26
KLHL3-201ENST00000309755 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
KLHL3-201ENST00000309755 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
KLHL3-201ENST00000309755 NACADO15069 1562 aa13.44□□□□□ -0.26
KLHL3-201ENST00000309755 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
KLHL3-201ENST00000309755 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
KLHL3-201ENST00000309755 RIPK4P57078 832 aa13.43□□□□□ -0.26
KLHL3-201ENST00000309755 APPP05067 770 aa13.43□□□□□ -0.26
KLHL3-201ENST00000309755 HOOK1Q9UJC3 728 aaKnown RBP13.43□□□□□ -0.26
KLHL3-201ENST00000309755 CALRP27797 417 aaKnown RBP13.43□□□□□ -0.26
KLHL3-201ENST00000309755 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
KLHL3-201ENST00000309755 AK7Q96M32 723 aa13.43□□□□□ -0.26
KLHL3-201ENST00000309755 COG3Q96JB2 828 aa13.42□□□□□ -0.26
KLHL3-201ENST00000309755 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
KLHL3-201ENST00000309755 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
KLHL3-201ENST00000309755 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
KLHL3-201ENST00000309755 NAP1L1P55209 391 aaKnown RBP13.42□□□□□ -0.26
KLHL3-201ENST00000309755 HSP90B2PQ58FF3 399 aa13.42□□□□□ -0.26
KLHL3-201ENST00000309755 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
KLHL3-201ENST00000309755 MAP7D2Q96T17 732 aa13.41□□□□□ -0.26
KLHL3-201ENST00000309755 API5Q9BZZ5 524 aaKnown RBP13.41□□□□□ -0.26
KLHL3-201ENST00000309755 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
KLHL3-201ENST00000309755 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
KLHL3-201ENST00000309755 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
KLHL3-201ENST00000309755 MTERF4Q7Z6M4 381 aaKnown RBP13.41□□□□□ -0.26
KLHL3-201ENST00000309755 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
KLHL3-201ENST00000309755 PDILTQ8N807 584 aa13.4□□□□□ -0.26
KLHL3-201ENST00000309755 RAD21O60216 631 aa13.4□□□□□ -0.26
KLHL3-201ENST00000309755 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
KLHL3-201ENST00000309755 NFXL1Q6ZNB6 911 aa13.4□□□□□ -0.26
KLHL3-201ENST00000309755 RRP12Q5JTH9 1297 aaKnown RBP13.4□□□□□ -0.26
KLHL3-201ENST00000309755 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
KLHL3-201ENST00000309755 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
KLHL3-201ENST00000309755 TEFQ10587 303 aa13.39□□□□□ -0.27
KLHL3-201ENST00000309755 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
KLHL3-201ENST00000309755 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
KLHL3-201ENST00000309755 CCDC18Q5T9S5 1454 aa13.39□□□□□ -0.27
KLHL3-201ENST00000309755 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
KLHL3-201ENST00000309755 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
KLHL3-201ENST00000309755 TRDNQ13061 729 aa13.38□□□□□ -0.27
KLHL3-201ENST00000309755 RUNDC1Q96C34 613 aa13.38□□□□□ -0.27
KLHL3-201ENST00000309755 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
KLHL3-201ENST00000309755 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
KLHL3-201ENST00000309755 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
KLHL3-201ENST00000309755 CDC45O75419 566 aa13.38□□□□□ -0.27
KLHL3-201ENST00000309755 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
KLHL3-201ENST00000309755 TRIM5Q9C035 493 aa13.37□□□□□ -0.27
KLHL3-201ENST00000309755 PRPF40AO75400 957 aaKnown RBP13.37□□□□□ -0.27
KLHL3-201ENST00000309755 G3BP1Q13283 466 aaKnown RBP eCLIP13.37□□□□□ -0.27
KLHL3-201ENST00000309755 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
KLHL3-201ENST00000309755 TSPY26PQ9H489 355 aa13.36□□□□□ -0.27
KLHL3-201ENST00000309755 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
KLHL3-201ENST00000309755 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
KLHL3-201ENST00000309755 CWC15Q9P013 229 aaKnown RBP13.36□□□□□ -0.27
KLHL3-201ENST00000309755 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
KLHL3-201ENST00000309755 H0YHG0 523 aa13.36□□□□□ -0.27
KLHL3-201ENST00000309755 CDR1P51861 262 aa13.36□□□□□ -0.27
KLHL3-201ENST00000309755 DHX16O60231 1041 aaKnown RBP13.35□□□□□ -0.27
KLHL3-201ENST00000309755 CCDC173Q0VFZ6 552 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms