RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZFYVE9O95405 1425 aa26.04■■□□□ 1.76
SSSCA1-201ENST00000309328 RIMS2Q9UQ26 1411 aa26.04■■□□□ 1.76
SSSCA1-201ENST00000309328 MED14O60244 1454 aa26.02■■□□□ 1.76
SSSCA1-201ENST00000309328 STAC3Q96MF2 364 aa26.01■■□□□ 1.75
SSSCA1-201ENST00000309328 PPP1R15AO75807 674 aaPredicted RBP26■■□□□ 1.75
SSSCA1-201ENST00000309328 VGFO15240 615 aaPredicted RBP25.99■■□□□ 1.75
SSSCA1-201ENST00000309328 NCKAP5LQ9HCH0 1330 aa25.97■■□□□ 1.75
SSSCA1-201ENST00000309328 LTKP29376 864 aa25.97■■□□□ 1.75
SSSCA1-201ENST00000309328 NPHP4O75161 1426 aaPredicted RBP25.96■■□□□ 1.75
SSSCA1-201ENST00000309328 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.75
SSSCA1-201ENST00000309328 RGL3Q3MIN7 710 aa25.95■■□□□ 1.74
SSSCA1-201ENST00000309328 POLR1AO95602 1720 aaPredicted RBP25.94■■□□□ 1.74
SSSCA1-201ENST00000309328 NEXMIFQ5QGS0 1516 aa25.93■■□□□ 1.74
SSSCA1-201ENST00000309328 STRCQ7RTU9 1775 aa25.92■■□□□ 1.74
SSSCA1-201ENST00000309328 MYO5BQ9ULV0 1848 aa25.91■■□□□ 1.74
SSSCA1-201ENST00000309328 CCER1Q8TC90 406 aaPredicted RBP25.91■■□□□ 1.74
SSSCA1-201ENST00000309328 MYOM2P54296 1465 aa25.88■■□□□ 1.73
SSSCA1-201ENST00000309328 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
SSSCA1-201ENST00000309328 BCANQ96GW7 911 aa25.86■■□□□ 1.73
SSSCA1-201ENST00000309328 SIN3AQ96ST3 1273 aa25.86■■□□□ 1.73
SSSCA1-201ENST00000309328 NEUROD1Q13562 356 aa25.85■■□□□ 1.73
SSSCA1-201ENST00000309328 DIP2AQ14689 1571 aa25.84■■□□□ 1.73
SSSCA1-201ENST00000309328 SETBP1Q9Y6X0 1596 aa25.83■■□□□ 1.73
SSSCA1-201ENST00000309328 PPLO60437 1756 aa25.83■■□□□ 1.73
SSSCA1-201ENST00000309328 TIMELESSQ9UNS1 1208 aa25.83■■□□□ 1.73
SSSCA1-201ENST00000309328 TBX22Q9Y458 520 aa25.83■■□□□ 1.73
SSSCA1-201ENST00000309328 NUTM2DQ5VT03 806 aaPredicted RBP25.82■■□□□ 1.72
SSSCA1-201ENST00000309328 DCAF11Q8TEB1 546 aa25.82■■□□□ 1.72
SSSCA1-201ENST00000309328 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
SSSCA1-201ENST00000309328 NRXN1Q9ULB1 1477 aa25.8■■□□□ 1.72
SSSCA1-201ENST00000309328 PIK3R4Q99570 1358 aa25.8■■□□□ 1.72
SSSCA1-201ENST00000309328 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
SSSCA1-201ENST00000309328 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
SSSCA1-201ENST00000309328 ADGRF5Q8IZF2 1346 aa25.77■■□□□ 1.72
SSSCA1-201ENST00000309328 ADAMTS13Q76LX8 1427 aa25.77■■□□□ 1.72
SSSCA1-201ENST00000309328 L3MBTL2Q969R5 705 aa25.76■■□□□ 1.71
SSSCA1-201ENST00000309328 SLC26A8Q96RN1 970 aa25.75■■□□□ 1.71
SSSCA1-201ENST00000309328 KDM2AQ9Y2K7 1162 aa25.73■■□□□ 1.71
SSSCA1-201ENST00000309328 C14orf93Q9H972 538 aaKnown RBP25.71■■□□□ 1.71
SSSCA1-201ENST00000309328 NRXN3Q9Y4C0 1643 aa25.7■■□□□ 1.71
SSSCA1-201ENST00000309328 KCNA6P17658 529 aa25.69■■□□□ 1.7
SSSCA1-201ENST00000309328 LAMC1P11047 1609 aa25.69■■□□□ 1.7
SSSCA1-201ENST00000309328 ALKQ9UM73 1620 aa25.69■■□□□ 1.7
SSSCA1-201ENST00000309328 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
SSSCA1-201ENST00000309328 CPS1P31327 1500 aa25.67■■□□□ 1.7
SSSCA1-201ENST00000309328 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
SSSCA1-201ENST00000309328 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.7
SSSCA1-201ENST00000309328 METP08581 1390 aa25.63■■□□□ 1.69
SSSCA1-201ENST00000309328 NWD1Q149M9 1564 aa25.63■■□□□ 1.69
SSSCA1-201ENST00000309328 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
SSSCA1-201ENST00000309328 CFAP70Q5T0N1 1121 aa25.61■■□□□ 1.69
SSSCA1-201ENST00000309328 AMOTL2Q9Y2J4 779 aa25.59■■□□□ 1.69
SSSCA1-201ENST00000309328 LRPPRCP42704 1394 aaKnown RBP25.58■■□□□ 1.69
SSSCA1-201ENST00000309328 SETD1AO15047 1707 aaKnown RBP25.58■■□□□ 1.69
SSSCA1-201ENST00000309328 KIAA1210Q9ULL0 1709 aa25.58■■□□□ 1.69
SSSCA1-201ENST00000309328 LTBP4Q8N2S1 1624 aa25.58■■□□□ 1.69
SSSCA1-201ENST00000309328 ABCC11Q96J66 1382 aa25.56■■□□□ 1.68
SSSCA1-201ENST00000309328 PTCH1Q13635 1447 aa25.56■■□□□ 1.68
SSSCA1-201ENST00000309328 NCOA3Q9Y6Q9 1424 aa25.56■■□□□ 1.68
SSSCA1-201ENST00000309328 TECPR2O15040 1411 aa25.55■■□□□ 1.68
SSSCA1-201ENST00000309328 CHD2O14647 1828 aaKnown RBP25.55■■□□□ 1.68
SSSCA1-201ENST00000309328 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
SSSCA1-201ENST00000309328 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
SSSCA1-201ENST00000309328 IQSEC2Q5JU85 1478 aa25.54■■□□□ 1.68
SSSCA1-201ENST00000309328 SIRT1Q96EB6 747 aa25.54■■□□□ 1.68
SSSCA1-201ENST00000309328 ADGRB1O14514 1584 aa25.53■■□□□ 1.68
SSSCA1-201ENST00000309328 XRN1Q8IZH2 1706 aaKnown RBP25.53■■□□□ 1.68
SSSCA1-201ENST00000309328 PROSER2Q86WR7 435 aaPredicted RBP25.52■■□□□ 1.68
SSSCA1-201ENST00000309328 TMEM132EQ6IEE7 984 aa25.51■■□□□ 1.67
SSSCA1-201ENST00000309328 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
SSSCA1-201ENST00000309328 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
SSSCA1-201ENST00000309328 LRRC7Q96NW7 1537 aa25.49■■□□□ 1.67
SSSCA1-201ENST00000309328 RALGAPBQ86X10 1494 aa25.49■■□□□ 1.67
SSSCA1-201ENST00000309328 FAM135BQ49AJ0 1406 aa25.49■■□□□ 1.67
SSSCA1-201ENST00000309328 GPRASP1Q5JY77 1395 aa25.49■■□□□ 1.67
SSSCA1-201ENST00000309328 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
SSSCA1-201ENST00000309328 DLC1Q96QB1 1528 aa25.47■■□□□ 1.67
SSSCA1-201ENST00000309328 TMEM94Q12767 1356 aa25.47■■□□□ 1.67
SSSCA1-201ENST00000309328 CERKQ8TCT0 537 aa25.47■■□□□ 1.67
SSSCA1-201ENST00000309328 STK26Q9P289 416 aa25.46■■□□□ 1.67
SSSCA1-201ENST00000309328 KNDC1Q76NI1 1749 aa25.46■■□□□ 1.67
SSSCA1-201ENST00000309328 TRPM1Q7Z4N2 1603 aa25.45■■□□□ 1.67
SSSCA1-201ENST00000309328 STRCP1A6NGW2 1772 aa25.45■■□□□ 1.66
SSSCA1-201ENST00000309328 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
SSSCA1-201ENST00000309328 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
SSSCA1-201ENST00000309328 EIF3AQ14152 1382 aaKnown RBP25.43■■□□□ 1.66
SSSCA1-201ENST00000309328 ILDR1Q86SU0 546 aaPredicted RBP25.41■■□□□ 1.66
SSSCA1-201ENST00000309328 MSH6P52701 1360 aa25.41■■□□□ 1.66
SSSCA1-201ENST00000309328 C14orf37Q86TY3 774 aa25.4■■□□□ 1.66
SSSCA1-201ENST00000309328 CARD11Q9BXL7 1154 aa25.4■■□□□ 1.66
SSSCA1-201ENST00000309328 TRAK1Q9UPV9 953 aa25.4■■□□□ 1.66
SSSCA1-201ENST00000309328 C19orf44Q9H6X5 657 aa25.39■■□□□ 1.66
SSSCA1-201ENST00000309328 POGKQ9P215 609 aa25.39■■□□□ 1.66
SSSCA1-201ENST00000309328 DCCP43146 1447 aa25.38■■□□□ 1.65
SSSCA1-201ENST00000309328 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
SSSCA1-201ENST00000309328 PRAM1Q96QH2 718 aa25.36■■□□□ 1.65
SSSCA1-201ENST00000309328 CADPS2Q86UW7 1296 aa25.34■■□□□ 1.65
SSSCA1-201ENST00000309328 TOM1O60784 492 aa25.33■■□□□ 1.65
SSSCA1-201ENST00000309328 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
SSSCA1-201ENST00000309328 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms