RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 TPD52L1Q16890 204 aaPredicted RBP10.15□□□□□ -0.79
PPARGC1B-201ENST00000309241 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 CCDC18Q5T9S5 1454 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 CARMIL2Q6F5E8 1435 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 NASPP49321 788 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 TERF2IPQ9NYB0 399 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 KIF7Q2M1P5 1343 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 ERCC4Q92889 916 aaPredicted RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 CGNQ9P2M7 1197 aaKnown RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 PDCL2Q8N4E4 241 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 MFAP1P55081 439 aaKnown RBP10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
PPARGC1B-201ENST00000309241 DCTN1Q14203 1278 aa10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 E9PSI1 815 aa10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
PPARGC1B-201ENST00000309241 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 C1orf141Q5JVX7 400 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 SLC4A10Q6U841 1118 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 DHX16O60231 1041 aaKnown RBP10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 CCDC39Q9UFE4 941 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 FOXD1Q16676 465 aa10.12□□□□□ -0.79
PPARGC1B-201ENST00000309241 PDCL3Q9H2J4 239 aa10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 NLRP13Q86W25 1043 aa10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 SF3A1Q15459 793 aaKnown RBP10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
PPARGC1B-201ENST00000309241 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 TTC5Q8N0Z6 440 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 TXLNBQ8N3L3 684 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 CNTLNQ9NXG0 1405 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 PAF1Q8N7H5 531 aa10.1□□□□□ -0.79
PPARGC1B-201ENST00000309241 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 MYO6Q9UM54 1294 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 REC8O95072 547 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 ERICH4A6NGS2 130 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 NUCB2P80303 420 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 H3BQV1 296 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
PPARGC1B-201ENST00000309241 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 RBM33Q96EV2 1170 aaKnown RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 ESPNB1AK53 854 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 BCL11BQ9C0K0 894 aaPredicted RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 ABCC8Q09428 1581 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 ANKRD20A12PQ8NF67 263 aa10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 PPP1R1BQ9UD71 204 aaPredicted RBP10.08□□□□□ -0.8
PPARGC1B-201ENST00000309241 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 AK7Q96M32 723 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 IPO7O95373 1038 aaKnown RBP10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC173Q0VFZ6 552 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 PLEKHH2Q8IVE3 1493 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 SIN3AQ96ST3 1273 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 MCM2P49736 904 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 RNF20Q5VTR2 975 aa10.07□□□□□ -0.8
PPARGC1B-201ENST00000309241 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 HSP90B2PQ58FF3 399 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 MBD3O95983 291 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 SMC4Q9NTJ3 1288 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 FAM107BQ9H098 131 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 NAT10Q9H0A0 1025 aaKnown RBP10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 DEF6Q9H4E7 631 aa10.06□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 NEXNQ0ZGT2 675 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 CT47A1Q5JQC4 288 aaPredicted RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 KIF2AO00139 706 aaPredicted RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 ODF2Q5BJF6 829 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 MIA2Q96PC5 1412 aa10.05□□□□□ -0.8
PPARGC1B-201ENST00000309241 GOLGA6L19H0YKK7 550 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 HMGB3O15347 200 aaKnown RBP10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC191Q8NCU4 936 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
PPARGC1B-201ENST00000309241 MCTP1Q6DN14 999 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 FOXD4L5Q5VV16 416 aaPredicted RBP10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 FOXD4L4Q8WXT5 416 aaPredicted RBP10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 PKD2Q13563 968 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 TRIM29Q14134 588 aa10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC47Q96A33 483 aaKnown RBP10.03□□□□□ -0.8
PPARGC1B-201ENST00000309241 H0YHG0 523 aa10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 IFT57Q9NWB7 429 aa10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 CUX2O14529 1486 aa10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 MYBBP1AQ9BQG0 1328 aaKnown RBP10.02□□□□□ -0.8
PPARGC1B-201ENST00000309241 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
PPARGC1B-201ENST00000309241 FAM184AQ8NB25 1140 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms