RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 LONRF3Q496Y0 759 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 HOMEZQ8IX15 550 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 DHX36Q9H2U1 1008 aaKnown RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 VAMP1P23763 118 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 NEUROD2Q15784 382 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 CCDC181Q5TID7 509 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 NYAP1Q6ZVC0 841 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 CEP120Q8N960 986 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 RPAP1Q9BWH6 1393 aaPredicted RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 TESPA1A2RU30 521 aaPredicted RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 POTEMA6NI47 508 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 FAPQ12884 760 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 LONRF2Q1L5Z9 754 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 POTEGQ6S5H5 508 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 ZNF295-AS1Q8N0V1 137 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 EPN3Q9H201 632 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 SPDYE5A6NIY4 337 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 SCAND2PQ9GZW5 306 aaPredicted RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 STRN4Q9NRL3 753 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 USTQ9Y2C2 406 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 KDM5BQ9UGL1 1544 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 GPATCH11Q8N954 259 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 PAWRQ96IZ0 340 aaKnown RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 SPEF1Q9Y4P9 236 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 HIF1AQ16665 826 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 NBPF6Q5VWK0 638 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 NAA35Q5VZE5 725 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 NBPF4Q96M43 638 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 FMNL2Q96PY5 1086 aa1.83□□□□□ -2.12
CEP290-201ENST00000309041 MAGEC2Q9UBF1 373 aaPredicted RBP1.83□□□□□ -2.12
CEP290-201ENST00000309041 ARL1P40616 181 aaPredicted RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 HS6ST3Q8IZP7 471 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 ZNF669Q96BR6 464 aaPredicted RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 A6NJR5 290 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 CDK11BP21127 795 aaKnown RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 SKOR2Q2VWA4 1001 aaPredicted RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 RUBCNQ92622 972 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 ZNF330Q9Y3S2 320 aaPredicted RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 ZMYND10O75800 440 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 GYS2P54840 703 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 FSTL1Q12841 308 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 HDAC5Q9UQL6 1122 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 TACC3Q9Y6A5 838 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 PRPF4BQ13523 1007 aaKnown RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 AFG3L2Q9Y4W6 797 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 HOXC8P31273 242 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 ZNF574Q6ZN55 896 aaPredicted RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 SYNGAP1Q96PV0 1343 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 USP46P62068 366 aa1.82□□□□□ -2.12
CEP290-201ENST00000309041 PROCA1Q8NCQ7 364 aaPredicted RBP1.82□□□□□ -2.12
CEP290-201ENST00000309041 SSH1Q8WYL5 1049 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 KAT6BQ8WYB5 2073 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 CLASP1Q7Z460 1538 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 KIF3BO15066 747 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 ENDOUP21128 410 aaKnown RBP1.81□□□□□ -2.12
CEP290-201ENST00000309041 ILDR2Q71H61 639 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 DDX49Q9Y6V7 483 aaKnown RBP1.81□□□□□ -2.12
CEP290-201ENST00000309041 FMR1Q06787 632 aaKnown RBP eCLIP1.81□□□□□ -2.12
CEP290-201ENST00000309041 GPSM3Q9Y4H4 160 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 WDR62O43379 1518 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 SF3B2Q13435 895 aaKnown RBP1.81□□□□□ -2.12
CEP290-201ENST00000309041 CDV3Q9UKY7 258 aaKnown RBP1.81□□□□□ -2.12
CEP290-201ENST00000309041 NEFMP07197 916 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 AKT1S1Q96B36 256 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 CRISPLD2Q9H0B8 497 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP1.81□□□□□ -2.12
CEP290-201ENST00000309041 CLSTN1O94985 981 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 DLGAP3O95886 979 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 CAMKK2Q96RR4 588 aa1.81□□□□□ -2.12
CEP290-201ENST00000309041 VGFO15240 615 aaPredicted RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 BRPF1P55201 1214 aaPredicted RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 NFKBIBQ15653 356 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 ZSWIM6Q9HCJ5 1215 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 ZNF69Q9UC07 566 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 COL9A2Q14055 689 aaPredicted RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 RNF217Q8TC41 542 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 PRDM10Q9NQV6 1147 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 APBB1IPQ7Z5R6 666 aaPredicted RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 CCAR2Q8N163 923 aaKnown RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 SCYL1Q96KG9 808 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 PHOX2BQ99453 314 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 EIF5BO60841 1220 aaKnown RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.8□□□□□ -2.12
CEP290-201ENST00000309041 ERBB3P21860 1342 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 KRT86O43790 486 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 PTMAP06454 111 aaKnown RBP1.8□□□□□ -2.12
CEP290-201ENST00000309041 RLBP1P12271 317 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 KRT9P35527 623 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 NUTM1Q86Y26 1132 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.8□□□□□ -2.12
CEP290-201ENST00000309041 PITPNM3Q9BZ71 974 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 NCAPD3P42695 1498 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 HECW1Q76N89 1606 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 RIPPLY1Q0D2K3 151 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 CYB5RLQ6IPT4 315 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 PCDH18Q9HCL0 1135 aa1.8□□□□□ -2.12
CEP290-201ENST00000309041 SNPHO15079 494 aa1.79□□□□□ -2.12
CEP290-201ENST00000309041 PABPN1Q86U42 306 aaKnown RBP eCLIP1.79□□□□□ -2.12
CEP290-201ENST00000309041 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms