RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 ZMYM4Q5VZL5 1548 aa32.91■■■□□ 2.86
RFWD2-201ENST00000308769 ZC3H13Q5T200 1668 aaKnown RBP32.9■■■□□ 2.86
RFWD2-201ENST00000308769 PPLO60437 1756 aa32.89■■■□□ 2.86
RFWD2-201ENST00000308769 CHGAP10645 457 aaKnown RBP32.88■■■□□ 2.85
RFWD2-201ENST00000308769 NRXN1Q9ULB1 1477 aa32.87■■■□□ 2.85
RFWD2-201ENST00000308769 CFAP70Q5T0N1 1121 aa32.86■■■□□ 2.85
RFWD2-201ENST00000308769 NOS1P29475 1434 aa32.85■■■□□ 2.85
RFWD2-201ENST00000308769 SYNMO15061 1565 aa32.85■■■□□ 2.85
RFWD2-201ENST00000308769 KTN1Q86UP2 1357 aaKnown RBP32.84■■■□□ 2.85
RFWD2-201ENST00000308769 PER1O15534 1290 aaPredicted RBP32.83■■■□□ 2.85
RFWD2-201ENST00000308769 PIK3C2BO00750 1634 aa32.83■■■□□ 2.85
RFWD2-201ENST00000308769 RALBP1Q15311 655 aa32.81■■■□□ 2.84
RFWD2-201ENST00000308769 EIF3AQ14152 1382 aaKnown RBP32.8■■■□□ 2.84
RFWD2-201ENST00000308769 MYBBP1AQ9BQG0 1328 aaKnown RBP32.8■■■□□ 2.84
RFWD2-201ENST00000308769 PANK3Q9H999 370 aa32.78■■■□□ 2.84
RFWD2-201ENST00000308769 ARHGAP31Q2M1Z3 1444 aa32.78■■■□□ 2.84
RFWD2-201ENST00000308769 FKBP8Q14318 412 aa32.77■■■□□ 2.84
RFWD2-201ENST00000308769 KIF13AQ9H1H9 1805 aa32.77■■■□□ 2.84
RFWD2-201ENST00000308769 ZBED9Q6R2W3 1325 aa32.77■■■□□ 2.84
RFWD2-201ENST00000308769 PARD3Q8TEW0 1356 aa32.77■■■□□ 2.84
RFWD2-201ENST00000308769 TMC1Q8TDI8 760 aa32.77■■■□□ 2.84
RFWD2-201ENST00000308769 PIK3C2GO75747 1445 aa32.74■■■□□ 2.83
RFWD2-201ENST00000308769 BRD4O60885 1362 aaPredicted RBP32.73■■■□□ 2.83
RFWD2-201ENST00000308769 MYOM1P52179 1685 aa32.73■■■□□ 2.83
RFWD2-201ENST00000308769 PNISRQ8TF01 805 aaKnown RBP32.72■■■□□ 2.83
RFWD2-201ENST00000308769 SETBP1Q9Y6X0 1596 aa32.72■■■□□ 2.83
RFWD2-201ENST00000308769 PREX1Q8TCU6 1659 aa32.71■■■□□ 2.83
RFWD2-201ENST00000308769 KDM5AP29375 1690 aaKnown RBP32.7■■■□□ 2.83
RFWD2-201ENST00000308769 NEFLP07196 543 aa32.69■■■□□ 2.82
RFWD2-201ENST00000308769 MYO3AQ8NEV4 1616 aa32.69■■■□□ 2.82
RFWD2-201ENST00000308769 MYO5BQ9ULV0 1848 aa32.68■■■□□ 2.82
RFWD2-201ENST00000308769 CC2D1BQ5T0F9 858 aaKnown RBP32.68■■■□□ 2.82
RFWD2-201ENST00000308769 RPGRIP1LQ68CZ1 1315 aa32.67■■■□□ 2.82
RFWD2-201ENST00000308769 CDCA8Q53HL2 280 aa32.67■■■□□ 2.82
RFWD2-201ENST00000308769 REREQ9P2R6 1566 aa32.66■■■□□ 2.82
RFWD2-201ENST00000308769 NEXMIFQ5QGS0 1516 aa32.66■■■□□ 2.82
RFWD2-201ENST00000308769 BCANQ96GW7 911 aa32.65■■■□□ 2.82
RFWD2-201ENST00000308769 NLRP13Q86W25 1043 aa32.64■■■□□ 2.82
RFWD2-201ENST00000308769 ADGRB1O14514 1584 aa32.64■■■□□ 2.81
RFWD2-201ENST00000308769 ERVK-7P63135 1459 aa32.63■■■□□ 2.81
RFWD2-201ENST00000308769 IDI1Q13907 227 aa32.63■■■□□ 2.81
RFWD2-201ENST00000308769 LRPPRCP42704 1394 aaKnown RBP32.63■■■□□ 2.81
RFWD2-201ENST00000308769 C14orf93Q9H972 538 aaKnown RBP32.62■■■□□ 2.81
RFWD2-201ENST00000308769 NUTM2DQ5VT03 806 aaPredicted RBP32.6■■■□□ 2.81
RFWD2-201ENST00000308769 AGLP35573 1532 aa32.6■■■□□ 2.81
RFWD2-201ENST00000308769 SLC52A1Q9NWF4 448 aa32.57■■■□□ 2.8
RFWD2-201ENST00000308769 TMEM131LA2VDJ0 1609 aa32.57■■■□□ 2.8
RFWD2-201ENST00000308769 QRICH2Q9H0J4 1663 aa32.56■■■□□ 2.8
RFWD2-201ENST00000308769 CLTCQ00610 1675 aaKnown RBP32.56■■■□□ 2.8
RFWD2-201ENST00000308769 TMEM132EQ6IEE7 984 aa32.55■■■□□ 2.8
RFWD2-201ENST00000308769 TRAK1Q9UPV9 953 aa32.54■■■□□ 2.8
RFWD2-201ENST00000308769 SBNO2Q9Y2G9 1366 aa32.54■■■□□ 2.8
RFWD2-201ENST00000308769 SENP3-EIF4A1A0A087X0R7 540 aa32.54■■■□□ 2.8
RFWD2-201ENST00000308769 KNSTRNQ9Y448 316 aa32.54■■■□□ 2.8
RFWD2-201ENST00000308769 CENPJQ9HC77 1338 aaPredicted RBP32.53■■■□□ 2.8
RFWD2-201ENST00000308769 ARHGEF40Q8TER5 1519 aa32.53■■■□□ 2.8
RFWD2-201ENST00000308769 VGFO15240 615 aaPredicted RBP32.53■■■□□ 2.8
RFWD2-201ENST00000308769 FBXO31Q5XUX0 539 aaPredicted RBP32.53■■■□□ 2.8
RFWD2-201ENST00000308769 SLC24A1O60721 1099 aa32.52■■■□□ 2.8
RFWD2-201ENST00000308769 ASXL1Q8IXJ9 1541 aa32.5■■■□□ 2.79
RFWD2-201ENST00000308769 AMER1Q5JTC6 1135 aaPredicted RBP32.49■■■□□ 2.79
RFWD2-201ENST00000308769 ARHGEF28Q8N1W1 1705 aaKnown RBP32.48■■■□□ 2.79
RFWD2-201ENST00000308769 ZFYVE9O95405 1425 aa32.45■■■□□ 2.78
RFWD2-201ENST00000308769 IRX6P78412 446 aaPredicted RBP32.44■■■□□ 2.78
RFWD2-201ENST00000308769 SMG6Q86US8 1419 aaKnown RBP32.43■■■□□ 2.78
RFWD2-201ENST00000308769 MLECQ14165 292 aa32.43■■■□□ 2.78
RFWD2-201ENST00000308769 PPP6R1Q9UPN7 881 aa32.42■■■□□ 2.78
RFWD2-201ENST00000308769 SENP3Q9H4L4 574 aaPredicted RBP32.4■■■□□ 2.78
RFWD2-201ENST00000308769 SPATA31D1Q6ZQQ2 1576 aa32.38■■■□□ 2.77
RFWD2-201ENST00000308769 NPC1L1Q9UHC9 1359 aa32.37■■■□□ 2.77
RFWD2-201ENST00000308769 PPP2R1AP30153 589 aa32.36■■■□□ 2.77
RFWD2-201ENST00000308769 PELP1Q8IZL8 1130 aaKnown RBP32.36■■■□□ 2.77
RFWD2-201ENST00000308769 NUDCQ9Y266 331 aa32.36■■■□□ 2.77
RFWD2-201ENST00000308769 CARD14Q9BXL6 1004 aa32.34■■■□□ 2.77
RFWD2-201ENST00000308769 BLMP54132 1417 aaPredicted RBP32.31■■■□□ 2.76
RFWD2-201ENST00000308769 STAG3Q9UJ98 1225 aa32.3■■■□□ 2.76
RFWD2-201ENST00000308769 TULP4Q9NRJ4 1543 aa32.3■■■□□ 2.76
RFWD2-201ENST00000308769 INSRP06213 1382 aa32.27■■■□□ 2.76
RFWD2-201ENST00000308769 SALL2Q9Y467 1007 aaPredicted RBP32.27■■■□□ 2.76
RFWD2-201ENST00000308769 A2ML1A8K2U0 1454 aa32.26■■■□□ 2.75
RFWD2-201ENST00000308769 STK26Q9P289 416 aa32.26■■■□□ 2.75
RFWD2-201ENST00000308769 ALKQ9UM73 1620 aa32.25■■■□□ 2.75
RFWD2-201ENST00000308769 SLC12A5Q9H2X9 1139 aa32.24■■■□□ 2.75
RFWD2-201ENST00000308769 SAFB2Q14151 953 aaKnown RBP eCLIP32.23■■■□□ 2.754e-6■□□□□ 10.7
RFWD2-201ENST00000308769 PTPRMP28827 1452 aa32.22■■■□□ 2.75
RFWD2-201ENST00000308769 EVC2Q86UK5 1308 aa32.22■■■□□ 2.75
RFWD2-201ENST00000308769 NSD3Q9BZ95 1437 aa32.22■■■□□ 2.75
RFWD2-201ENST00000308769 ADAMTS8Q9UP79 889 aa32.2■■■□□ 2.75
RFWD2-201ENST00000308769 ZMYM3Q14202 1370 aa32.2■■■□□ 2.74
RFWD2-201ENST00000308769 YTHDC2Q9H6S0 1430 aaKnown RBP32.19■■■□□ 2.74
RFWD2-201ENST00000308769 ESF1Q9H501 851 aaKnown RBP32.19■■■□□ 2.74
RFWD2-201ENST00000308769 ERICH6BQ5W0A0 696 aa32.17■■■□□ 2.74
RFWD2-201ENST00000308769 RIMS2Q9UQ26 1411 aa32.16■■■□□ 2.74
RFWD2-201ENST00000308769 WDR43Q15061 677 aaKnown RBP eCLIP32.15■■■□□ 2.74
RFWD2-201ENST00000308769 USP32Q8NFA0 1604 aa32.15■■■□□ 2.74
RFWD2-201ENST00000308769 SETD1AO15047 1707 aaKnown RBP32.14■■■□□ 2.74
RFWD2-201ENST00000308769 PUS7Q96PZ0 661 aaKnown RBP32.14■■■□□ 2.73
RFWD2-201ENST00000308769 CABP2Q9NPB3 220 aa32.14■■■□□ 2.73
RFWD2-201ENST00000308769 RNF123Q5XPI4 1314 aa32.12■■■□□ 2.73
RFWD2-201ENST00000308769 PRAM1Q96QH2 718 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 830 ms