RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 WASHC2AQ641Q2 1341 aa16.69■□□□□ 0.26
TRIM40-205ENST00000307859 UGGT1Q9NYU2 1555 aa16.69■□□□□ 0.26
TRIM40-205ENST00000307859 KIAA1210Q9ULL0 1709 aa16.69■□□□□ 0.26
TRIM40-205ENST00000307859 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
TRIM40-205ENST00000307859 GPRASP1Q5JY77 1395 aa16.68■□□□□ 0.26
TRIM40-205ENST00000307859 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
TRIM40-205ENST00000307859 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
TRIM40-205ENST00000307859 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
TRIM40-205ENST00000307859 NCKAP5LQ9HCH0 1330 aa16.66■□□□□ 0.26
TRIM40-205ENST00000307859 ADGRB3O60242 1522 aa16.66■□□□□ 0.26
TRIM40-205ENST00000307859 ARHGAP31Q2M1Z3 1444 aa16.66■□□□□ 0.26
TRIM40-205ENST00000307859 GGT6Q6P531 493 aa16.66■□□□□ 0.26
TRIM40-205ENST00000307859 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
TRIM40-205ENST00000307859 TOM1O60784 492 aa16.65■□□□□ 0.26
TRIM40-205ENST00000307859 ROCK2O75116 1388 aaKnown RBP16.65■□□□□ 0.26
TRIM40-205ENST00000307859 PPLO60437 1756 aa16.64■□□□□ 0.25
TRIM40-205ENST00000307859 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
TRIM40-205ENST00000307859 SYNMO15061 1565 aa16.64■□□□□ 0.25
TRIM40-205ENST00000307859 IQGAP1P46940 1657 aa16.64■□□□□ 0.25
TRIM40-205ENST00000307859 NOS1P29475 1434 aa16.64■□□□□ 0.25
TRIM40-205ENST00000307859 MYOM2P54296 1465 aa16.64■□□□□ 0.25
TRIM40-205ENST00000307859 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
TRIM40-205ENST00000307859 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
TRIM40-205ENST00000307859 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
TRIM40-205ENST00000307859 KIF7Q2M1P5 1343 aa16.6■□□□□ 0.25
TRIM40-205ENST00000307859 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
TRIM40-205ENST00000307859 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
TRIM40-205ENST00000307859 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
TRIM40-205ENST00000307859 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
TRIM40-205ENST00000307859 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
TRIM40-205ENST00000307859 NRXN1Q9ULB1 1477 aa16.58■□□□□ 0.24
TRIM40-205ENST00000307859 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
TRIM40-205ENST00000307859 CPS1P31327 1500 aa16.57■□□□□ 0.24
TRIM40-205ENST00000307859 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
TRIM40-205ENST00000307859 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
TRIM40-205ENST00000307859 ANP32CO43423 234 aa16.55■□□□□ 0.24
TRIM40-205ENST00000307859 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
TRIM40-205ENST00000307859 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
TRIM40-205ENST00000307859 CCER2I3L3R5 266 aa16.52■□□□□ 0.24
TRIM40-205ENST00000307859 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
TRIM40-205ENST00000307859 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
TRIM40-205ENST00000307859 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
TRIM40-205ENST00000307859 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
TRIM40-205ENST00000307859 ERVK-7P63135 1459 aa16.51■□□□□ 0.23
TRIM40-205ENST00000307859 MYO3AQ8NEV4 1616 aa16.5■□□□□ 0.23
TRIM40-205ENST00000307859 SCAF11Q99590 1463 aaKnown RBP16.49■□□□□ 0.23
TRIM40-205ENST00000307859 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
TRIM40-205ENST00000307859 RPGRIP1LQ68CZ1 1315 aa16.48■□□□□ 0.23
TRIM40-205ENST00000307859 PIK3C2GO75747 1445 aa16.48■□□□□ 0.23
TRIM40-205ENST00000307859 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
TRIM40-205ENST00000307859 TESK2Q96S53 571 aa16.46■□□□□ 0.23
TRIM40-205ENST00000307859 SLC52A1Q9NWF4 448 aa16.46■□□□□ 0.23
TRIM40-205ENST00000307859 A2ML1A8K2U0 1454 aa16.45■□□□□ 0.22
TRIM40-205ENST00000307859 RGS17Q9UGC6 210 aaPredicted RBP16.45■□□□□ 0.22
TRIM40-205ENST00000307859 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
TRIM40-205ENST00000307859 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
TRIM40-205ENST00000307859 ZFYVE9O95405 1425 aa16.43■□□□□ 0.22
TRIM40-205ENST00000307859 ADGRB1O14514 1584 aa16.43■□□□□ 0.22
TRIM40-205ENST00000307859 IDI1Q13907 227 aa16.43■□□□□ 0.22
TRIM40-205ENST00000307859 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
TRIM40-205ENST00000307859 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
TRIM40-205ENST00000307859 KDM5AP29375 1690 aaKnown RBP16.4■□□□□ 0.22
TRIM40-205ENST00000307859 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
TRIM40-205ENST00000307859 FBXO31Q5XUX0 539 aaPredicted RBP16.39■□□□□ 0.21
TRIM40-205ENST00000307859 MYOM1P52179 1685 aa16.39■□□□□ 0.21
TRIM40-205ENST00000307859 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
TRIM40-205ENST00000307859 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
TRIM40-205ENST00000307859 C14orf93Q9H972 538 aaKnown RBP16.38■□□□□ 0.21
TRIM40-205ENST00000307859 QRICH2Q9H0J4 1663 aa16.38■□□□□ 0.21
TRIM40-205ENST00000307859 TMF1P82094 1093 aa16.37■□□□□ 0.21
TRIM40-205ENST00000307859 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
TRIM40-205ENST00000307859 SBNO2Q9Y2G9 1366 aa16.36■□□□□ 0.21
TRIM40-205ENST00000307859 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
TRIM40-205ENST00000307859 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.21
TRIM40-205ENST00000307859 MED14O60244 1454 aa16.33■□□□□ 0.2
TRIM40-205ENST00000307859 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
TRIM40-205ENST00000307859 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.2
TRIM40-205ENST00000307859 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
TRIM40-205ENST00000307859 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
TRIM40-205ENST00000307859 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
TRIM40-205ENST00000307859 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
TRIM40-205ENST00000307859 TNRQ92752 1358 aa16.3■□□□□ 0.2
TRIM40-205ENST00000307859 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
TRIM40-205ENST00000307859 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
TRIM40-205ENST00000307859 LRRC7Q96NW7 1537 aa16.3■□□□□ 0.2
TRIM40-205ENST00000307859 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.2
TRIM40-205ENST00000307859 NRXN3Q9Y4C0 1643 aa16.27■□□□□ 0.2
TRIM40-205ENST00000307859 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
TRIM40-205ENST00000307859 CCDC184Q52MB2 194 aa16.27■□□□□ 0.19
TRIM40-205ENST00000307859 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.19
TRIM40-205ENST00000307859 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.19
TRIM40-205ENST00000307859 CENPJQ9HC77 1338 aaPredicted RBP16.26■□□□□ 0.19
TRIM40-205ENST00000307859 NLRP1Q9C000 1473 aa16.25■□□□□ 0.19
TRIM40-205ENST00000307859 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
TRIM40-205ENST00000307859 PARD3Q8TEW0 1356 aa16.25■□□□□ 0.19
TRIM40-205ENST00000307859 TMEM132EQ6IEE7 984 aa16.24■□□□□ 0.19
TRIM40-205ENST00000307859 RALBP1Q15311 655 aa16.23■□□□□ 0.19
TRIM40-205ENST00000307859 PANK3Q9H999 370 aa16.23■□□□□ 0.19
TRIM40-205ENST00000307859 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
TRIM40-205ENST00000307859 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms