RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 C8orf34Q49A92 452 aa16.85■□□□□ 0.29
SEC23A-201ENST00000307712 GGT6Q6P531 493 aa16.85■□□□□ 0.29
SEC23A-201ENST00000307712 PTMSP20962 102 aa16.84■□□□□ 0.29
SEC23A-201ENST00000307712 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
SEC23A-201ENST00000307712 MCM4P33991 863 aa16.83■□□□□ 0.28
SEC23A-201ENST00000307712 IGHDP01880 384 aa16.82■□□□□ 0.28
SEC23A-201ENST00000307712 DDX19BQ9UMR2 479 aa16.81■□□□□ 0.28
SEC23A-201ENST00000307712 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
SEC23A-201ENST00000307712 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
SEC23A-201ENST00000307712 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
SEC23A-201ENST00000307712 CUL7Q14999 1698 aa16.8■□□□□ 0.28
SEC23A-201ENST00000307712 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
SEC23A-201ENST00000307712 MTHFSP49914 203 aa16.8■□□□□ 0.28
SEC23A-201ENST00000307712 SKOR2Q2VWA4 1001 aaPredicted RBP16.8■□□□□ 0.28
SEC23A-201ENST00000307712 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
SEC23A-201ENST00000307712 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
SEC23A-201ENST00000307712 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
SEC23A-201ENST00000307712 PTPRGP23470 1445 aa16.78■□□□□ 0.28
SEC23A-201ENST00000307712 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
SEC23A-201ENST00000307712 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
SEC23A-201ENST00000307712 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
SEC23A-201ENST00000307712 WWC1Q8IX03 1113 aa16.77■□□□□ 0.28
SEC23A-201ENST00000307712 TEX14Q8IWB6 1497 aa16.77■□□□□ 0.27
SEC23A-201ENST00000307712 AAMPQ13685 434 aa16.77■□□□□ 0.27
SEC23A-201ENST00000307712 TSR2Q969E8 191 aaKnown RBP16.76■□□□□ 0.27
SEC23A-201ENST00000307712 PER1O15534 1290 aaPredicted RBP16.76■□□□□ 0.27
SEC23A-201ENST00000307712 CC2D2AQ9P2K1 1620 aa16.76■□□□□ 0.27
SEC23A-201ENST00000307712 TCOF1Q13428 1488 aaKnown RBP16.75■□□□□ 0.27
SEC23A-201ENST00000307712 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
SEC23A-201ENST00000307712 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
SEC23A-201ENST00000307712 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
SEC23A-201ENST00000307712 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
SEC23A-201ENST00000307712 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
SEC23A-201ENST00000307712 SEC24BO95487 1268 aa16.73■□□□□ 0.27
SEC23A-201ENST00000307712 RIPK4P57078 832 aa16.73■□□□□ 0.27
SEC23A-201ENST00000307712 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
SEC23A-201ENST00000307712 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
SEC23A-201ENST00000307712 ESPNB1AK53 854 aa16.72■□□□□ 0.27
SEC23A-201ENST00000307712 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
SEC23A-201ENST00000307712 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
SEC23A-201ENST00000307712 HDGFL2Q7Z4V5 671 aaPredicted RBP16.72■□□□□ 0.27
SEC23A-201ENST00000307712 PLEKHH1Q9ULM0 1364 aa16.72■□□□□ 0.27
SEC23A-201ENST00000307712 UBE2Q2Q8WVN8 375 aa16.72■□□□□ 0.27
SEC23A-201ENST00000307712 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.27
SEC23A-201ENST00000307712 NASPP49321 788 aaPredicted RBP16.71■□□□□ 0.27
SEC23A-201ENST00000307712 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
SEC23A-201ENST00000307712 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.27
SEC23A-201ENST00000307712 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
SEC23A-201ENST00000307712 NKTRP30414 1462 aaKnown RBP16.71■□□□□ 0.27
SEC23A-201ENST00000307712 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
SEC23A-201ENST00000307712 SOX12O15370 315 aa16.7■□□□□ 0.26
SEC23A-201ENST00000307712 MCTP1Q6DN14 999 aa16.7■□□□□ 0.26
SEC23A-201ENST00000307712 DNAJC5BQ9UF47 199 aa16.7■□□□□ 0.26
SEC23A-201ENST00000307712 PLB1Q6P1J6 1458 aa16.7■□□□□ 0.26
SEC23A-201ENST00000307712 PANK2Q9BZ23 570 aa16.69■□□□□ 0.26
SEC23A-201ENST00000307712 PKNOX2Q96KN3 472 aa16.69■□□□□ 0.26
SEC23A-201ENST00000307712 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
SEC23A-201ENST00000307712 ST18O60284 1047 aa16.69■□□□□ 0.26
SEC23A-201ENST00000307712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.69■□□□□ 0.267e-7■□□□□ 10.5
SEC23A-201ENST00000307712 TESK2Q96S53 571 aa16.69■□□□□ 0.26
SEC23A-201ENST00000307712 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
SEC23A-201ENST00000307712 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
SEC23A-201ENST00000307712 MCCP23508 829 aa16.68■□□□□ 0.26
SEC23A-201ENST00000307712 KIAA2012Q0VF49 1180 aa16.68■□□□□ 0.26
SEC23A-201ENST00000307712 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
SEC23A-201ENST00000307712 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
SEC23A-201ENST00000307712 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
SEC23A-201ENST00000307712 XRCC6P12956 609 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEC23A-201ENST00000307712 PZPP20742 1482 aa16.68■□□□□ 0.26
SEC23A-201ENST00000307712 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
SEC23A-201ENST00000307712 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
SEC23A-201ENST00000307712 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
SEC23A-201ENST00000307712 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
SEC23A-201ENST00000307712 NOB1Q9ULX3 412 aaKnown RBP16.67■□□□□ 0.26
SEC23A-201ENST00000307712 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
SEC23A-201ENST00000307712 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
SEC23A-201ENST00000307712 ARHGEF11O15085 1522 aa16.66■□□□□ 0.26
SEC23A-201ENST00000307712 C1orf115Q9H7X2 142 aa16.66■□□□□ 0.26
SEC23A-201ENST00000307712 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
SEC23A-201ENST00000307712 WDR63Q8IWG1 891 aa16.66■□□□□ 0.26
SEC23A-201ENST00000307712 KIF16BQ96L93 1317 aa16.66■□□□□ 0.26
SEC23A-201ENST00000307712 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
SEC23A-201ENST00000307712 KIAA0586Q9BVV6 1533 aa16.65■□□□□ 0.26
SEC23A-201ENST00000307712 KDM6BO15054 1643 aa16.65■□□□□ 0.26
SEC23A-201ENST00000307712 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
SEC23A-201ENST00000307712 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
SEC23A-201ENST00000307712 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
SEC23A-201ENST00000307712 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
SEC23A-201ENST00000307712 RBM10P98175 930 aaKnown RBP16.64■□□□□ 0.25
SEC23A-201ENST00000307712 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
SEC23A-201ENST00000307712 DIAPH1O60610 1272 aaKnown RBP16.63■□□□□ 0.25
SEC23A-201ENST00000307712 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
SEC23A-201ENST00000307712 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
SEC23A-201ENST00000307712 TRIM6-TRIM34B2RNG4 842 aa16.63■□□□□ 0.25
SEC23A-201ENST00000307712 CHAF1AQ13111 956 aaPredicted RBP16.63■□□□□ 0.25
SEC23A-201ENST00000307712 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.63■□□□□ 0.25
SEC23A-201ENST00000307712 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
SEC23A-201ENST00000307712 RRAGDQ9NQL2 400 aaPredicted RBP16.63■□□□□ 0.25
SEC23A-201ENST00000307712 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
SEC23A-201ENST00000307712 MINK1Q8N4C8 1332 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms