RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 TMX4Q9H1E5 349 aaPredicted RBP17.41■□□□□ 0.38
CHRNA7-201ENST00000306901 TRIM29Q14134 588 aa17.4■□□□□ 0.38
CHRNA7-201ENST00000306901 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
CHRNA7-201ENST00000306901 MPNDQ8N594 471 aa17.4■□□□□ 0.38
CHRNA7-201ENST00000306901 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
CHRNA7-201ENST00000306901 AMPHP49418 695 aa17.39■□□□□ 0.38
CHRNA7-201ENST00000306901 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
CHRNA7-201ENST00000306901 HSP90B2PQ58FF3 399 aa17.39■□□□□ 0.37
CHRNA7-201ENST00000306901 SYNE3Q6ZMZ3 975 aa17.39■□□□□ 0.37
CHRNA7-201ENST00000306901 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
CHRNA7-201ENST00000306901 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
CHRNA7-201ENST00000306901 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
CHRNA7-201ENST00000306901 CAVIN1Q6NZI2 390 aaKnown RBP17.37■□□□□ 0.37
CHRNA7-201ENST00000306901 C22orf23Q9BZE7 217 aa17.37■□□□□ 0.37
CHRNA7-201ENST00000306901 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
CHRNA7-201ENST00000306901 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
CHRNA7-201ENST00000306901 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
CHRNA7-201ENST00000306901 HSP90AB3PQ58FF7 597 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 ANKRD20A12PQ8NF67 263 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 CAGE1Q8TC20 777 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 E9PSI1 815 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 MRE11P49959 708 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 HDAC5Q9UQL6 1122 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 REC8O95072 547 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
CHRNA7-201ENST00000306901 CPLX1O14810 134 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 APAF1O14727 1248 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 RDXP35241 583 aaKnown RBP17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 SPC24Q8NBT2 197 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 ACBD3Q9H3P7 528 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 TRAK2O60296 914 aa17.35■□□□□ 0.37
CHRNA7-201ENST00000306901 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
CHRNA7-201ENST00000306901 ZKSCAN1P17029 563 aaPredicted RBP17.34■□□□□ 0.37
CHRNA7-201ENST00000306901 CWC15Q9P013 229 aaKnown RBP17.34■□□□□ 0.37
CHRNA7-201ENST00000306901 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
CHRNA7-201ENST00000306901 GTF2E1P29083 439 aaPredicted RBP17.33■□□□□ 0.36
CHRNA7-201ENST00000306901 PRKRIP1Q9H875 184 aaPredicted RBP17.33■□□□□ 0.36
CHRNA7-201ENST00000306901 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
CHRNA7-201ENST00000306901 PHLDB1Q86UU1 1377 aa17.32■□□□□ 0.36
CHRNA7-201ENST00000306901 DHX16O60231 1041 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-201ENST00000306901 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-201ENST00000306901 NUCB2P80303 420 aa17.32■□□□□ 0.36
CHRNA7-201ENST00000306901 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-201ENST00000306901 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
CHRNA7-201ENST00000306901 RUFY2Q8WXA3 655 aa17.31■□□□□ 0.36
CHRNA7-201ENST00000306901 CCDC66A2RUB6 948 aa17.31■□□□□ 0.36
CHRNA7-201ENST00000306901 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 CCDC73Q6ZRK6 1079 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 TCEAL9Q9UHQ7 104 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 HOOK1Q9UJC3 728 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 SMC2O95347 1197 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 TSPYL1Q9H0U9 437 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 PANK1Q8TE04 598 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 CCDC191Q8NCU4 936 aa17.3■□□□□ 0.36
CHRNA7-201ENST00000306901 CDR1P51861 262 aa17.29■□□□□ 0.36
CHRNA7-201ENST00000306901 PRPF40AO75400 957 aaKnown RBP17.29■□□□□ 0.36
CHRNA7-201ENST00000306901 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
CHRNA7-201ENST00000306901 DDX19BQ9UMR2 479 aa17.29■□□□□ 0.36
CHRNA7-201ENST00000306901 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
CHRNA7-201ENST00000306901 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
CHRNA7-201ENST00000306901 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
CHRNA7-201ENST00000306901 CPLX2Q6PUV4 134 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-201ENST00000306901 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
CHRNA7-201ENST00000306901 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
CHRNA7-201ENST00000306901 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
CHRNA7-201ENST00000306901 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHRNA7-201ENST00000306901 LEKR1Q6ZMV7 388 aa17.27■□□□□ 0.36
CHRNA7-201ENST00000306901 ERICH4A6NGS2 130 aa17.27■□□□□ 0.35
CHRNA7-201ENST00000306901 CT47A1Q5JQC4 288 aaPredicted RBP17.27■□□□□ 0.35
CHRNA7-201ENST00000306901 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.35
CHRNA7-201ENST00000306901 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
CHRNA7-201ENST00000306901 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
CHRNA7-201ENST00000306901 UQCRHLA0A096LP55 91 aa17.26■□□□□ 0.35
CHRNA7-201ENST00000306901 UQCRHP07919 91 aa17.26■□□□□ 0.35
CHRNA7-201ENST00000306901 MTERF4Q7Z6M4 381 aaKnown RBP17.26■□□□□ 0.35
CHRNA7-201ENST00000306901 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
CHRNA7-201ENST00000306901 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-201ENST00000306901 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
CHRNA7-201ENST00000306901 PRDM10Q9NQV6 1147 aa17.25■□□□□ 0.35
CHRNA7-201ENST00000306901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHRNA7-201ENST00000306901 CUX2O14529 1486 aa17.24■□□□□ 0.35
CHRNA7-201ENST00000306901 CEBPZQ03701 1054 aaKnown RBP17.24■□□□□ 0.35
CHRNA7-201ENST00000306901 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
CHRNA7-201ENST00000306901 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHRNA7-201ENST00000306901 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
CHRNA7-201ENST00000306901 FYB1O15117 783 aa17.23■□□□□ 0.35
CHRNA7-201ENST00000306901 RNF20Q5VTR2 975 aa17.23■□□□□ 0.35
CHRNA7-201ENST00000306901 RIPK4P57078 832 aa17.23■□□□□ 0.35
CHRNA7-201ENST00000306901 CCDC173Q0VFZ6 552 aa17.22■□□□□ 0.35
CHRNA7-201ENST00000306901 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
CHRNA7-201ENST00000306901 SDF4Q9BRK5 362 aa17.22■□□□□ 0.35
CHRNA7-201ENST00000306901 TRDNQ13061 729 aa17.22■□□□□ 0.35
CHRNA7-201ENST00000306901 KIF3BO15066 747 aa17.22■□□□□ 0.35
CHRNA7-201ENST00000306901 NAT10Q9H0A0 1025 aaKnown RBP17.22■□□□□ 0.35
CHRNA7-201ENST00000306901 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms