RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
LDB2-201ENST00000304523 PPP2R1AP30153 589 aa12.31□□□□□ -0.44
LDB2-201ENST00000304523 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
LDB2-201ENST00000304523 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
LDB2-201ENST00000304523 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
LDB2-201ENST00000304523 ABCC2Q92887 1545 aa12.3□□□□□ -0.44
LDB2-201ENST00000304523 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
LDB2-201ENST00000304523 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
LDB2-201ENST00000304523 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
LDB2-201ENST00000304523 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
LDB2-201ENST00000304523 MYOM1P52179 1685 aa12.28□□□□□ -0.44
LDB2-201ENST00000304523 NPC1L1Q9UHC9 1359 aa12.28□□□□□ -0.44
LDB2-201ENST00000304523 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
LDB2-201ENST00000304523 WDR43Q15061 677 aaKnown RBP eCLIP12.28□□□□□ -0.44
LDB2-201ENST00000304523 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.45
LDB2-201ENST00000304523 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.45
LDB2-201ENST00000304523 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
LDB2-201ENST00000304523 FRAT2O75474 233 aaPredicted RBP12.26□□□□□ -0.45
LDB2-201ENST00000304523 DUOX2Q9NRD8 1548 aa12.26□□□□□ -0.45
LDB2-201ENST00000304523 USP19O94966 1318 aa12.24□□□□□ -0.45
LDB2-201ENST00000304523 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
LDB2-201ENST00000304523 RGS3P49796 1198 aa12.24□□□□□ -0.45
LDB2-201ENST00000304523 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
LDB2-201ENST00000304523 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
LDB2-201ENST00000304523 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
LDB2-201ENST00000304523 CEP152O94986 1710 aa12.23□□□□□ -0.45
LDB2-201ENST00000304523 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
LDB2-201ENST00000304523 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
LDB2-201ENST00000304523 SCAF11Q99590 1463 aaKnown RBP12.23□□□□□ -0.45
LDB2-201ENST00000304523 NINLQ9Y2I6 1382 aa12.23□□□□□ -0.45
LDB2-201ENST00000304523 FAM43AQ8N2R8 423 aa12.22□□□□□ -0.45
LDB2-201ENST00000304523 NGEFQ8N5V2 710 aa12.22□□□□□ -0.45
LDB2-201ENST00000304523 NLRP1Q9C000 1473 aa12.22□□□□□ -0.45
LDB2-201ENST00000304523 KDM5AP29375 1690 aaKnown RBP12.22□□□□□ -0.45
LDB2-201ENST00000304523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.21□□□□□ -0.45
LDB2-201ENST00000304523 KIAA1210Q9ULL0 1709 aa12.21□□□□□ -0.45
LDB2-201ENST00000304523 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
LDB2-201ENST00000304523 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.46
LDB2-201ENST00000304523 E9PSI1 815 aa12.2□□□□□ -0.46
LDB2-201ENST00000304523 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
LDB2-201ENST00000304523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.46
LDB2-201ENST00000304523 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
LDB2-201ENST00000304523 TRPM2O94759 1503 aa12.2□□□□□ -0.46
LDB2-201ENST00000304523 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
LDB2-201ENST00000304523 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
LDB2-201ENST00000304523 IGHDP01880 384 aa12.19□□□□□ -0.46
LDB2-201ENST00000304523 FBLN2P98095 1184 aa12.19□□□□□ -0.46
LDB2-201ENST00000304523 BCAR3O75815 825 aa12.18□□□□□ -0.46
LDB2-201ENST00000304523 APAF1O14727 1248 aa12.17□□□□□ -0.46
LDB2-201ENST00000304523 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 BECN1Q14457 450 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 UBE2Q2Q8WVN8 375 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 PTPRTO14522 1441 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 CLTCL1P53675 1640 aa12.16□□□□□ -0.46
LDB2-201ENST00000304523 SEC24BO95487 1268 aa12.15□□□□□ -0.46
LDB2-201ENST00000304523 AAMPQ13685 434 aa12.15□□□□□ -0.46
LDB2-201ENST00000304523 ANTXR1Q9H6X2 564 aa12.15□□□□□ -0.46
LDB2-201ENST00000304523 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
LDB2-201ENST00000304523 POGKQ9P215 609 aa12.14□□□□□ -0.47
LDB2-201ENST00000304523 DEPDC5O75140 1603 aa12.14□□□□□ -0.47
LDB2-201ENST00000304523 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
LDB2-201ENST00000304523 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
LDB2-201ENST00000304523 CENPJQ9HC77 1338 aaPredicted RBP12.13□□□□□ -0.47
LDB2-201ENST00000304523 POLR3AO14802 1390 aaPredicted RBP12.13□□□□□ -0.47
LDB2-201ENST00000304523 ERVK-7P63135 1459 aa12.13□□□□□ -0.47
LDB2-201ENST00000304523 ABCC1P33527 1531 aa12.12□□□□□ -0.47
LDB2-201ENST00000304523 TET3O43151 1660 aa12.12□□□□□ -0.47
LDB2-201ENST00000304523 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
LDB2-201ENST00000304523 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
LDB2-201ENST00000304523 L1TD1Q5T7N2 865 aaKnown RBP12.11□□□□□ -0.47
LDB2-201ENST00000304523 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
LDB2-201ENST00000304523 TBC1D32Q96NH3 1257 aa12.11□□□□□ -0.47
LDB2-201ENST00000304523 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
LDB2-201ENST00000304523 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
LDB2-201ENST00000304523 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
LDB2-201ENST00000304523 MAP3K4Q9Y6R4 1608 aa12.1□□□□□ -0.47
LDB2-201ENST00000304523 PLCH2O75038 1416 aa12.1□□□□□ -0.47
LDB2-201ENST00000304523 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
LDB2-201ENST00000304523 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
LDB2-201ENST00000304523 MYOM2P54296 1465 aa12.09□□□□□ -0.47
LDB2-201ENST00000304523 IFT172Q9UG01 1749 aa12.09□□□□□ -0.47
LDB2-201ENST00000304523 PHF23Q9BUL5 403 aaPredicted RBP12.08□□□□□ -0.48
LDB2-201ENST00000304523 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
LDB2-201ENST00000304523 SLKQ9H2G2 1235 aaPredicted RBP12.08□□□□□ -0.48
LDB2-201ENST00000304523 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
LDB2-201ENST00000304523 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
LDB2-201ENST00000304523 UPF2Q9HAU5 1272 aaKnown RBP12.08□□□□□ -0.48
LDB2-201ENST00000304523 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
LDB2-201ENST00000304523 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
LDB2-201ENST00000304523 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
LDB2-201ENST00000304523 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
LDB2-201ENST00000304523 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
LDB2-201ENST00000304523 ZFYVE16Q7Z3T8 1539 aa12.07□□□□□ -0.48
LDB2-201ENST00000304523 KANK1Q14678 1352 aa12.07□□□□□ -0.48
LDB2-201ENST00000304523 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
LDB2-201ENST00000304523 TRAPPC8Q9Y2L5 1435 aa12.06□□□□□ -0.48
LDB2-201ENST00000304523 FSD2A1L4K1 749 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms