RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 C3P01024 1663 aa10.57□□□□□ -0.72
CTNNA1-201ENST00000302763 ERVK-7P63135 1459 aa10.56□□□□□ -0.72
CTNNA1-201ENST00000302763 USP47Q96K76 1375 aa10.56□□□□□ -0.72
CTNNA1-201ENST00000302763 QRICH2Q9H0J4 1663 aa10.56□□□□□ -0.72
CTNNA1-201ENST00000302763 TESK2Q96S53 571 aa10.54□□□□□ -0.72
CTNNA1-201ENST00000302763 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
CTNNA1-201ENST00000302763 ZFYVE9O95405 1425 aa10.53□□□□□ -0.72
CTNNA1-201ENST00000302763 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
CTNNA1-201ENST00000302763 PTPRMP28827 1452 aa10.52□□□□□ -0.72
CTNNA1-201ENST00000302763 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.72
CTNNA1-201ENST00000302763 FAM69CQ0P6D2 419 aa10.52□□□□□ -0.72
CTNNA1-201ENST00000302763 KIF3BO15066 747 aa10.52□□□□□ -0.73
CTNNA1-201ENST00000302763 NBPF1Q3BBV0 1214 aa10.51□□□□□ -0.73
CTNNA1-201ENST00000302763 ZNF326Q5BKZ1 582 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-201ENST00000302763 FER1L4A9Z1Z3 1794 aa10.51□□□□□ -0.73
CTNNA1-201ENST00000302763 DISP3Q9P2K9 1392 aa10.5□□□□□ -0.73
CTNNA1-201ENST00000302763 USP32Q8NFA0 1604 aa10.49□□□□□ -0.73
CTNNA1-201ENST00000302763 ADAMTSL3P82987 1691 aa10.49□□□□□ -0.73
CTNNA1-201ENST00000302763 A2ML1A8K2U0 1454 aa10.48□□□□□ -0.73
CTNNA1-201ENST00000302763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■□□□ 13.3
CTNNA1-201ENST00000302763 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-201ENST00000302763 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-201ENST00000302763 DDX10Q13206 875 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-201ENST00000302763 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-201ENST00000302763 TULP4Q9NRJ4 1543 aa10.47□□□□□ -0.73
CTNNA1-201ENST00000302763 DCAF11Q8TEB1 546 aa10.47□□□□□ -0.73
CTNNA1-201ENST00000302763 EIF4G2P78344 907 aaKnown RBP eCLIP10.47□□□□□ -0.732e-6■■■□□ 17.4
CTNNA1-201ENST00000302763 ADGRF5Q8IZF2 1346 aa10.47□□□□□ -0.73
CTNNA1-201ENST00000302763 KANK1Q14678 1352 aa10.46□□□□□ -0.73
CTNNA1-201ENST00000302763 ALKQ9UM73 1620 aa10.46□□□□□ -0.73
CTNNA1-201ENST00000302763 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
CTNNA1-201ENST00000302763 PER1O15534 1290 aaPredicted RBP10.44□□□□□ -0.74
CTNNA1-201ENST00000302763 ROCK2O75116 1388 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-201ENST00000302763 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
CTNNA1-201ENST00000302763 SHPRHQ149N8 1683 aa10.43□□□□□ -0.74
CTNNA1-201ENST00000302763 ANKRD26Q9UPS8 1709 aa10.43□□□□□ -0.74
CTNNA1-201ENST00000302763 MED14O60244 1454 aa10.43□□□□□ -0.74
CTNNA1-201ENST00000302763 CCDC184Q52MB2 194 aa10.43□□□□□ -0.74
CTNNA1-201ENST00000302763 TOPAZ1Q8N9V7 1692 aa10.42□□□□□ -0.74
CTNNA1-201ENST00000302763 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
CTNNA1-201ENST00000302763 ANP32CO43423 234 aa10.41□□□□□ -0.74
CTNNA1-201ENST00000302763 STAC3Q96MF2 364 aa10.41□□□□□ -0.74
CTNNA1-201ENST00000302763 SLIT1O75093 1534 aa10.41□□□□□ -0.74
CTNNA1-201ENST00000302763 DLC1Q96QB1 1528 aa10.41□□□□□ -0.74
CTNNA1-201ENST00000302763 CPS1P31327 1500 aa10.4□□□□□ -0.74
CTNNA1-201ENST00000302763 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
CTNNA1-201ENST00000302763 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
CTNNA1-201ENST00000302763 PPP6R1Q9UPN7 881 aa10.4□□□□□ -0.75
CTNNA1-201ENST00000302763 CD163L1Q9NR16 1453 aa10.39□□□□□ -0.75
CTNNA1-201ENST00000302763 SENP3-EIF4A1A0A087X0R7 540 aa10.39□□□□□ -0.75
CTNNA1-201ENST00000302763 RIMS1Q86UR5 1692 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-201ENST00000302763 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
CTNNA1-201ENST00000302763 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
CTNNA1-201ENST00000302763 XRN1Q8IZH2 1706 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-201ENST00000302763 ADGRB2O60241 1585 aa10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 IDI1Q13907 227 aa10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 FKBP8Q14318 412 aa10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 C14orf93Q9H972 538 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 AKAP12Q02952 1782 aa10.38□□□□□ -0.75
CTNNA1-201ENST00000302763 RGL3Q3MIN7 710 aa10.37□□□□□ -0.75
CTNNA1-201ENST00000302763 PRKRIP1Q9H875 184 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-201ENST00000302763 FBXO31Q5XUX0 539 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-201ENST00000302763 CARD11Q9BXL7 1154 aa10.37□□□□□ -0.75
CTNNA1-201ENST00000302763 WASHC2CQ9Y4E1 1318 aa10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 NLRP1Q9C000 1473 aa10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 KDM2AQ9Y2K7 1162 aa10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 RPGRIP1LQ68CZ1 1315 aa10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 MON2Q7Z3U7 1717 aa10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 LRPPRCP42704 1394 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 GGT6Q6P531 493 aa10.36□□□□□ -0.75
CTNNA1-201ENST00000302763 ZMYM3Q14202 1370 aa10.35□□□□□ -0.75
CTNNA1-201ENST00000302763 TECPR2O15040 1411 aa10.35□□□□□ -0.75
CTNNA1-201ENST00000302763 IRX6P78412 446 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-201ENST00000302763 CFAP70Q5T0N1 1121 aa10.34□□□□□ -0.75
CTNNA1-201ENST00000302763 KIF20BQ96Q89 1820 aa10.34□□□□□ -0.75
CTNNA1-201ENST00000302763 ADAMTS13Q76LX8 1427 aa10.33□□□□□ -0.76
CTNNA1-201ENST00000302763 USP54Q70EL1 1684 aa10.32□□□□□ -0.76
CTNNA1-201ENST00000302763 DNAJC5Q9H3Z4 198 aa10.32□□□□□ -0.76
CTNNA1-201ENST00000302763 CHD2O14647 1828 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-201ENST00000302763 SLC52A1Q9NWF4 448 aa10.31□□□□□ -0.76
CTNNA1-201ENST00000302763 NALCNQ8IZF0 1738 aa10.31□□□□□ -0.76
CTNNA1-201ENST00000302763 NPC1L1Q9UHC9 1359 aa10.3□□□□□ -0.76
CTNNA1-201ENST00000302763 CEP170BQ9Y4F5 1589 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-201ENST00000302763 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
CTNNA1-201ENST00000302763 RGPD8O14715 1765 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-201ENST00000302763 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
CTNNA1-201ENST00000302763 YTHDC2Q9H6S0 1430 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-201ENST00000302763 FAM9BQ8IZU0 186 aa10.29□□□□□ -0.76
CTNNA1-201ENST00000302763 PRKCSHP14314 528 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-201ENST00000302763 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-201ENST00000302763 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-201ENST00000302763 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-201ENST00000302763 PTPRUQ92729 1446 aa10.28□□□□□ -0.76
CTNNA1-201ENST00000302763 RIMS2Q9UQ26 1411 aa10.28□□□□□ -0.76
CTNNA1-201ENST00000302763 STRCP1A6NGW2 1772 aa10.27□□□□□ -0.77
CTNNA1-201ENST00000302763 BLMP54132 1417 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-201ENST00000302763 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
CTNNA1-201ENST00000302763 INSRP06213 1382 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms