RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 TMEM131LA2VDJ0 1609 aa12.81□□□□□ -0.36
VPREB1-201ENST00000302273 ZNF326Q5BKZ1 582 aaKnown RBP12.81□□□□□ -0.36
VPREB1-201ENST00000302273 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
VPREB1-201ENST00000302273 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
VPREB1-201ENST00000302273 LTKP29376 864 aa12.79□□□□□ -0.36
VPREB1-201ENST00000302273 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
VPREB1-201ENST00000302273 CLTCL1P53675 1640 aa12.79□□□□□ -0.36
VPREB1-201ENST00000302273 PLEKHG1Q9ULL1 1385 aa12.79□□□□□ -0.36
VPREB1-201ENST00000302273 UBR1Q8IWV7 1749 aa12.79□□□□□ -0.36
VPREB1-201ENST00000302273 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
VPREB1-201ENST00000302273 RGL3Q3MIN7 710 aa12.77□□□□□ -0.37
VPREB1-201ENST00000302273 TBX22Q9Y458 520 aa12.77□□□□□ -0.37
VPREB1-201ENST00000302273 CFAP65Q6ZU64 1925 aaKnown RBP12.76□□□□□ -0.37
VPREB1-201ENST00000302273 NPHP4O75161 1426 aaPredicted RBP12.75□□□□□ -0.37
VPREB1-201ENST00000302273 PIK3R4Q99570 1358 aa12.75□□□□□ -0.37
VPREB1-201ENST00000302273 KIF1BO60333 1816 aa12.74□□□□□ -0.37
VPREB1-201ENST00000302273 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
VPREB1-201ENST00000302273 MYOM2P54296 1465 aa12.74□□□□□ -0.37
VPREB1-201ENST00000302273 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
VPREB1-201ENST00000302273 DCAF11Q8TEB1 546 aa12.74□□□□□ -0.37
VPREB1-201ENST00000302273 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
VPREB1-201ENST00000302273 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
VPREB1-201ENST00000302273 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
VPREB1-201ENST00000302273 CERKQ8TCT0 537 aa12.73□□□□□ -0.37
VPREB1-201ENST00000302273 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
VPREB1-201ENST00000302273 L3MBTL2Q969R5 705 aa12.72□□□□□ -0.37
VPREB1-201ENST00000302273 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
VPREB1-201ENST00000302273 BCANQ96GW7 911 aa12.71□□□□□ -0.37
VPREB1-201ENST00000302273 C14orf93Q9H972 538 aaKnown RBP12.71□□□□□ -0.37
VPREB1-201ENST00000302273 PIK3C2GO75747 1445 aa12.7□□□□□ -0.38
VPREB1-201ENST00000302273 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
VPREB1-201ENST00000302273 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
VPREB1-201ENST00000302273 DIP2AQ14689 1571 aa12.69□□□□□ -0.38
VPREB1-201ENST00000302273 KCNA6P17658 529 aa12.68□□□□□ -0.38
VPREB1-201ENST00000302273 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
VPREB1-201ENST00000302273 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
VPREB1-201ENST00000302273 KDM2AQ9Y2K7 1162 aa12.67□□□□□ -0.38
VPREB1-201ENST00000302273 NUTM2DQ5VT03 806 aaPredicted RBP12.66□□□□□ -0.38
VPREB1-201ENST00000302273 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
VPREB1-201ENST00000302273 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
VPREB1-201ENST00000302273 IQGAP1P46940 1657 aa12.65□□□□□ -0.38
VPREB1-201ENST00000302273 POLR1AO95602 1720 aaPredicted RBP12.65□□□□□ -0.38
VPREB1-201ENST00000302273 NCOA3Q9Y6Q9 1424 aa12.64□□□□□ -0.39
VPREB1-201ENST00000302273 PPLO60437 1756 aa12.64□□□□□ -0.39
VPREB1-201ENST00000302273 ILDR2Q71H61 639 aa12.63□□□□□ -0.39
VPREB1-201ENST00000302273 ABCC11Q96J66 1382 aa12.63□□□□□ -0.39
VPREB1-201ENST00000302273 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
VPREB1-201ENST00000302273 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
VPREB1-201ENST00000302273 CPS1P31327 1500 aa12.62□□□□□ -0.39
VPREB1-201ENST00000302273 METP08581 1390 aa12.61□□□□□ -0.39
VPREB1-201ENST00000302273 MYO5BQ9ULV0 1848 aa12.61□□□□□ -0.39
VPREB1-201ENST00000302273 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
VPREB1-201ENST00000302273 IFT172Q9UG01 1749 aa12.61□□□□□ -0.39
VPREB1-201ENST00000302273 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
VPREB1-201ENST00000302273 TECPR2O15040 1411 aa12.61□□□□□ -0.39
VPREB1-201ENST00000302273 NKTRP30414 1462 aaKnown RBP12.6□□□□□ -0.39
VPREB1-201ENST00000302273 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
VPREB1-201ENST00000302273 LAMC1P11047 1609 aa12.6□□□□□ -0.39
VPREB1-201ENST00000302273 SOCS7O14512 581 aa12.6□□□□□ -0.39
VPREB1-201ENST00000302273 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
VPREB1-201ENST00000302273 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
VPREB1-201ENST00000302273 GPRASP1Q5JY77 1395 aa12.59□□□□□ -0.39
VPREB1-201ENST00000302273 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
VPREB1-201ENST00000302273 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
VPREB1-201ENST00000302273 NRXN3Q9Y4C0 1643 aa12.58□□□□□ -0.4
VPREB1-201ENST00000302273 PTCH1Q13635 1447 aa12.57□□□□□ -0.4
VPREB1-201ENST00000302273 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
VPREB1-201ENST00000302273 IQSEC2Q5JU85 1478 aa12.57□□□□□ -0.4
VPREB1-201ENST00000302273 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
VPREB1-201ENST00000302273 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
VPREB1-201ENST00000302273 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
VPREB1-201ENST00000302273 ADGRB1O14514 1584 aa12.56□□□□□ -0.4
VPREB1-201ENST00000302273 NWD1Q149M9 1564 aa12.56□□□□□ -0.4
VPREB1-201ENST00000302273 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
VPREB1-201ENST00000302273 TMEM132EQ6IEE7 984 aa12.55□□□□□ -0.4
VPREB1-201ENST00000302273 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
VPREB1-201ENST00000302273 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
VPREB1-201ENST00000302273 RALGAPBQ86X10 1494 aa12.54□□□□□ -0.4
VPREB1-201ENST00000302273 DLC1Q96QB1 1528 aa12.54□□□□□ -0.4
VPREB1-201ENST00000302273 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
VPREB1-201ENST00000302273 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
VPREB1-201ENST00000302273 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
VPREB1-201ENST00000302273 CARD11Q9BXL7 1154 aa12.53□□□□□ -0.4
VPREB1-201ENST00000302273 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
VPREB1-201ENST00000302273 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.41
VPREB1-201ENST00000302273 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
VPREB1-201ENST00000302273 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
VPREB1-201ENST00000302273 POGKQ9P215 609 aa12.51□□□□□ -0.41
VPREB1-201ENST00000302273 STK26Q9P289 416 aa12.51□□□□□ -0.41
VPREB1-201ENST00000302273 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
VPREB1-201ENST00000302273 DCCP43146 1447 aa12.51□□□□□ -0.41
VPREB1-201ENST00000302273 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
VPREB1-201ENST00000302273 PRAM1Q96QH2 718 aa12.5□□□□□ -0.41
VPREB1-201ENST00000302273 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
VPREB1-201ENST00000302273 MSH6P52701 1360 aa12.5□□□□□ -0.41
VPREB1-201ENST00000302273 XRN1Q8IZH2 1706 aaKnown RBP12.5□□□□□ -0.41
VPREB1-201ENST00000302273 ASXL1Q8IXJ9 1541 aa12.49□□□□□ -0.41
VPREB1-201ENST00000302273 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
VPREB1-201ENST00000302273 TOM1O60784 492 aa12.49□□□□□ -0.41
VPREB1-201ENST00000302273 PUS7Q96PZ0 661 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms