RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
UBXN1-202ENST00000301935 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
UBXN1-202ENST00000301935 KCNA6P17658 529 aa22.67■■□□□ 1.22
UBXN1-202ENST00000301935 SLC52A1Q9NWF4 448 aa22.66■■□□□ 1.22
UBXN1-202ENST00000301935 UNC13BO14795 1591 aa22.66■■□□□ 1.22
UBXN1-202ENST00000301935 SLC26A8Q96RN1 970 aa22.65■■□□□ 1.22
UBXN1-202ENST00000301935 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
UBXN1-202ENST00000301935 ZFYVE9O95405 1425 aa22.64■■□□□ 1.21
UBXN1-202ENST00000301935 TMEM131LA2VDJ0 1609 aa22.64■■□□□ 1.21
UBXN1-202ENST00000301935 CHD2O14647 1828 aaKnown RBP22.61■■□□□ 1.21
UBXN1-202ENST00000301935 ITGAEP38570 1179 aa22.6■■□□□ 1.21
UBXN1-202ENST00000301935 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
UBXN1-202ENST00000301935 PLEKHG1Q9ULL1 1385 aa22.6■■□□□ 1.21
UBXN1-202ENST00000301935 E9PCH4 1651 aa22.59■■□□□ 1.21
UBXN1-202ENST00000301935 RBM33Q96EV2 1170 aaKnown RBP22.58■■□□□ 1.21
UBXN1-202ENST00000301935 RGS17Q9UGC6 210 aaPredicted RBP22.58■■□□□ 1.21
UBXN1-202ENST00000301935 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
UBXN1-202ENST00000301935 ROCK1Q13464 1354 aa22.57■■□□□ 1.2
UBXN1-202ENST00000301935 MSH6P52701 1360 aa22.56■■□□□ 1.2
UBXN1-202ENST00000301935 BCANQ96GW7 911 aa22.56■■□□□ 1.2
UBXN1-202ENST00000301935 IQGAP3Q86VI3 1631 aa22.56■■□□□ 1.2
UBXN1-202ENST00000301935 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
UBXN1-202ENST00000301935 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
UBXN1-202ENST00000301935 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
UBXN1-202ENST00000301935 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
UBXN1-202ENST00000301935 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
UBXN1-202ENST00000301935 ADAMTS13Q76LX8 1427 aa22.48■■□□□ 1.19
UBXN1-202ENST00000301935 COL16A1Q07092 1604 aaPredicted RBP22.48■■□□□ 1.19
UBXN1-202ENST00000301935 HFM1A2PYH4 1435 aa22.48■■□□□ 1.19
UBXN1-202ENST00000301935 NCOA3Q9Y6Q9 1424 aa22.48■■□□□ 1.19
UBXN1-202ENST00000301935 HRCP23327 699 aa22.46■■□□□ 1.19
UBXN1-202ENST00000301935 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.19
UBXN1-202ENST00000301935 SLAIN2Q9P270 581 aa22.46■■□□□ 1.19
UBXN1-202ENST00000301935 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
UBXN1-202ENST00000301935 CHGAP10645 457 aaKnown RBP22.45■■□□□ 1.18
UBXN1-202ENST00000301935 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
UBXN1-202ENST00000301935 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
UBXN1-202ENST00000301935 TRPM2O94759 1503 aa22.43■■□□□ 1.18
UBXN1-202ENST00000301935 PIK3R4Q99570 1358 aa22.43■■□□□ 1.18
UBXN1-202ENST00000301935 JCADQ9P266 1359 aa22.43■■□□□ 1.18
UBXN1-202ENST00000301935 POTEAQ6S8J7 498 aa22.43■■□□□ 1.18
UBXN1-202ENST00000301935 NAIPQ13075 1403 aa22.41■■□□□ 1.18
UBXN1-202ENST00000301935 SPHKAPQ2M3C7 1700 aa22.41■■□□□ 1.18
UBXN1-202ENST00000301935 NUTM2DQ5VT03 806 aaPredicted RBP22.41■■□□□ 1.18
UBXN1-202ENST00000301935 AHDC1Q5TGY3 1603 aaPredicted RBP22.4■■□□□ 1.18
UBXN1-202ENST00000301935 NUP155O75694 1391 aa22.39■■□□□ 1.18
UBXN1-202ENST00000301935 NRXN3Q9Y4C0 1643 aa22.39■■□□□ 1.18
UBXN1-202ENST00000301935 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
UBXN1-202ENST00000301935 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
UBXN1-202ENST00000301935 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
UBXN1-202ENST00000301935 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
UBXN1-202ENST00000301935 SETBP1Q9Y6X0 1596 aa22.36■■□□□ 1.17
UBXN1-202ENST00000301935 LRP6O75581 1613 aa22.35■■□□□ 1.17
UBXN1-202ENST00000301935 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
UBXN1-202ENST00000301935 CADPS2Q86UW7 1296 aa22.35■■□□□ 1.17
UBXN1-202ENST00000301935 C19orf44Q9H6X5 657 aa22.34■■□□□ 1.17
UBXN1-202ENST00000301935 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.17
UBXN1-202ENST00000301935 ATF3P18847 181 aa22.32■■□□□ 1.16
UBXN1-202ENST00000301935 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
UBXN1-202ENST00000301935 DCCP43146 1447 aa22.31■■□□□ 1.16
UBXN1-202ENST00000301935 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
UBXN1-202ENST00000301935 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
UBXN1-202ENST00000301935 NHSL1Q5SYE7 1610 aa22.28■■□□□ 1.16
UBXN1-202ENST00000301935 ASXL1Q8IXJ9 1541 aa22.27■■□□□ 1.16
UBXN1-202ENST00000301935 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
UBXN1-202ENST00000301935 BRINP3Q76B58 766 aa22.25■■□□□ 1.15
UBXN1-202ENST00000301935 MST1RQ04912 1400 aa22.24■■□□□ 1.15
UBXN1-202ENST00000301935 NALCNQ8IZF0 1738 aa22.24■■□□□ 1.15
UBXN1-202ENST00000301935 KIF1BO60333 1816 aa22.23■■□□□ 1.15
UBXN1-202ENST00000301935 MEX3CQ5U5Q3 659 aaKnown RBP22.23■■□□□ 1.15
UBXN1-202ENST00000301935 METP08581 1390 aa22.23■■□□□ 1.15
UBXN1-202ENST00000301935 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
UBXN1-202ENST00000301935 ADGRL3Q9HAR2 1447 aa22.21■■□□□ 1.15
UBXN1-202ENST00000301935 ZNF772Q68DY9 489 aaPredicted RBP22.2■■□□□ 1.14
UBXN1-202ENST00000301935 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
UBXN1-202ENST00000301935 PTCH1Q13635 1447 aa22.13■■□□□ 1.13
UBXN1-202ENST00000301935 CDK12Q9NYV4 1490 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-202ENST00000301935 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-202ENST00000301935 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-202ENST00000301935 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-202ENST00000301935 LAMC1P11047 1609 aa22.12■■□□□ 1.13
UBXN1-202ENST00000301935 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
UBXN1-202ENST00000301935 LRRC59Q96AG4 307 aaKnown RBP22.09■■□□□ 1.13
UBXN1-202ENST00000301935 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
UBXN1-202ENST00000301935 PPLO60437 1756 aa22.09■■□□□ 1.13
UBXN1-202ENST00000301935 PNPLA6Q8IY17 1366 aa22.09■■□□□ 1.13
UBXN1-202ENST00000301935 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
UBXN1-202ENST00000301935 RXRBP28702 533 aa22.08■■□□□ 1.13
UBXN1-202ENST00000301935 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
UBXN1-202ENST00000301935 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.12
UBXN1-202ENST00000301935 C1orf167Q5SNV9 1468 aa22.08■■□□□ 1.12
UBXN1-202ENST00000301935 AFF2P51816 1311 aa22.07■■□□□ 1.12
UBXN1-202ENST00000301935 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
UBXN1-202ENST00000301935 UPF1Q92900 1129 aaKnown RBP eCLIP22.07■■□□□ 1.12
UBXN1-202ENST00000301935 DDX17Q92841 729 aaKnown RBP22.06■■□□□ 1.12
UBXN1-202ENST00000301935 ROBO2Q9HCK4 1378 aa22.05■■□□□ 1.12
UBXN1-202ENST00000301935 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
UBXN1-202ENST00000301935 RGS12O14924 1447 aa22.01■■□□□ 1.11
UBXN1-202ENST00000301935 C8orf37Q96NL8 207 aa22.01■■□□□ 1.11
UBXN1-202ENST00000301935 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms