RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 RALGAPBQ86X10 1494 aa13.2□□□□□ -0.3
SCARA3-201ENST00000301904 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
SCARA3-201ENST00000301904 RLBP1P12271 317 aa13.19□□□□□ -0.3
SCARA3-201ENST00000301904 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
SCARA3-201ENST00000301904 MAPK8IP3Q9UPT6 1336 aa13.19□□□□□ -0.3
SCARA3-201ENST00000301904 ROCK1Q13464 1354 aa13.19□□□□□ -0.3
SCARA3-201ENST00000301904 ZMYM4Q5VZL5 1548 aa13.19□□□□□ -0.3
SCARA3-201ENST00000301904 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
SCARA3-201ENST00000301904 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
SCARA3-201ENST00000301904 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
SCARA3-201ENST00000301904 CTTNBP2Q8WZ74 1663 aa13.18□□□□□ -0.3
SCARA3-201ENST00000301904 E9PSI1 815 aa13.18□□□□□ -0.3
SCARA3-201ENST00000301904 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
SCARA3-201ENST00000301904 KIF14Q15058 1648 aa13.18□□□□□ -0.3
SCARA3-201ENST00000301904 TMF1P82094 1093 aa13.17□□□□□ -0.3
SCARA3-201ENST00000301904 DNTTIP2Q5QJE6 756 aaKnown RBP13.17□□□□□ -0.3
SCARA3-201ENST00000301904 TESK2Q96S53 571 aa13.17□□□□□ -0.3
SCARA3-201ENST00000301904 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
SCARA3-201ENST00000301904 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
SCARA3-201ENST00000301904 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
SCARA3-201ENST00000301904 HSCBQ8IWL3 235 aa13.16□□□□□ -0.3
SCARA3-201ENST00000301904 ABCA10Q8WWZ4 1543 aa13.15□□□□□ -0.3
SCARA3-201ENST00000301904 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
SCARA3-201ENST00000301904 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
SCARA3-201ENST00000301904 NLRP1Q9C000 1473 aa13.15□□□□□ -0.3
SCARA3-201ENST00000301904 CGNL1Q0VF96 1302 aa13.15□□□□□ -0.3
SCARA3-201ENST00000301904 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
SCARA3-201ENST00000301904 TPM2P07951 284 aa13.14□□□□□ -0.31
SCARA3-201ENST00000301904 HNRNPMP52272 730 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCARA3-201ENST00000301904 RIPK4P57078 832 aa13.14□□□□□ -0.31
SCARA3-201ENST00000301904 PRG4Q92954 1404 aaPredicted RBP13.14□□□□□ -0.31
SCARA3-201ENST00000301904 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
SCARA3-201ENST00000301904 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
SCARA3-201ENST00000301904 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
SCARA3-201ENST00000301904 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
SCARA3-201ENST00000301904 SAMD9Q5K651 1589 aa13.12□□□□□ -0.31
SCARA3-201ENST00000301904 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
SCARA3-201ENST00000301904 MSNP26038 577 aaKnown RBP13.12□□□□□ -0.31
SCARA3-201ENST00000301904 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
SCARA3-201ENST00000301904 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
SCARA3-201ENST00000301904 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
SCARA3-201ENST00000301904 MPNDQ8N594 471 aa13.11□□□□□ -0.31
SCARA3-201ENST00000301904 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
SCARA3-201ENST00000301904 NASPP49321 788 aaPredicted RBP13.11□□□□□ -0.31
SCARA3-201ENST00000301904 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
SCARA3-201ENST00000301904 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
SCARA3-201ENST00000301904 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
SCARA3-201ENST00000301904 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
SCARA3-201ENST00000301904 CHMP7Q8WUX9 453 aaPredicted RBP13.1□□□□□ -0.31
SCARA3-201ENST00000301904 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
SCARA3-201ENST00000301904 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
SCARA3-201ENST00000301904 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
SCARA3-201ENST00000301904 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
SCARA3-201ENST00000301904 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
SCARA3-201ENST00000301904 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
SCARA3-201ENST00000301904 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
SCARA3-201ENST00000301904 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
SCARA3-201ENST00000301904 SSFA2P28290 1259 aa13.08□□□□□ -0.32
SCARA3-201ENST00000301904 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
SCARA3-201ENST00000301904 GAPVD1Q14C86 1478 aa13.08□□□□□ -0.32
SCARA3-201ENST00000301904 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
SCARA3-201ENST00000301904 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
SCARA3-201ENST00000301904 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
SCARA3-201ENST00000301904 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
SCARA3-201ENST00000301904 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
SCARA3-201ENST00000301904 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
SCARA3-201ENST00000301904 ZSCAN30Q86W11 494 aa13.07□□□□□ -0.32
SCARA3-201ENST00000301904 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
SCARA3-201ENST00000301904 UQCRHP07919 91 aa13.06□□□□□ -0.32
SCARA3-201ENST00000301904 TSC1Q92574 1164 aa13.06□□□□□ -0.32
SCARA3-201ENST00000301904 MAGI2Q86UL8 1455 aa13.06□□□□□ -0.32
SCARA3-201ENST00000301904 CUL7Q14999 1698 aa13.06□□□□□ -0.32
SCARA3-201ENST00000301904 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
SCARA3-201ENST00000301904 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
SCARA3-201ENST00000301904 TPRNQ4KMQ1 711 aa13.05□□□□□ -0.32
SCARA3-201ENST00000301904 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
SCARA3-201ENST00000301904 PRDM2Q13029 1718 aa13.05□□□□□ -0.32
SCARA3-201ENST00000301904 OFD1O75665 1012 aa13.05□□□□□ -0.32
SCARA3-201ENST00000301904 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
SCARA3-201ENST00000301904 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
SCARA3-201ENST00000301904 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
SCARA3-201ENST00000301904 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
SCARA3-201ENST00000301904 E9PCH4 1651 aa13.04□□□□□ -0.32
SCARA3-201ENST00000301904 FAM177BA6PVY3 158 aa13.04□□□□□ -0.32
SCARA3-201ENST00000301904 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
SCARA3-201ENST00000301904 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
SCARA3-201ENST00000301904 CAVIN1Q6NZI2 390 aaKnown RBP13.04□□□□□ -0.32
SCARA3-201ENST00000301904 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
SCARA3-201ENST00000301904 COL17A1Q9UMD9 1497 aaPredicted RBP13.03□□□□□ -0.32
SCARA3-201ENST00000301904 CCDC173Q0VFZ6 552 aa13.03□□□□□ -0.32
SCARA3-201ENST00000301904 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
SCARA3-201ENST00000301904 MCTP1Q6DN14 999 aa13.02□□□□□ -0.32
SCARA3-201ENST00000301904 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.32
SCARA3-201ENST00000301904 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.32
SCARA3-201ENST00000301904 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.32
SCARA3-201ENST00000301904 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
SCARA3-201ENST00000301904 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
SCARA3-201ENST00000301904 IGSF3O75054 1194 aa13.01□□□□□ -0.33
SCARA3-201ENST00000301904 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
SCARA3-201ENST00000301904 RNF214Q8ND24 703 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms