RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 CPLX1O14810 134 aa22.42■■□□□ 1.18
PITPNC1-201ENST00000299954 NAP1L1P55209 391 aaKnown RBP22.42■■□□□ 1.18
PITPNC1-201ENST00000299954 IPO7O95373 1038 aaKnown RBP22.41■■□□□ 1.18
PITPNC1-201ENST00000299954 IFIT2P09913 472 aaKnown RBP22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 NFXL1Q6ZNB6 911 aa22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 APAF1O14727 1248 aa22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 TRIM34Q9BYJ4 488 aa22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 E9PSI1 815 aa22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 IFT57Q9NWB7 429 aa22.4■■□□□ 1.18
PITPNC1-201ENST00000299954 FMN1Q68DA7 1419 aa22.39■■□□□ 1.18
PITPNC1-201ENST00000299954 TEX35Q5T0J7 233 aa22.39■■□□□ 1.18
PITPNC1-201ENST00000299954 ZKSCAN1P17029 563 aaPredicted RBP22.39■■□□□ 1.17
PITPNC1-201ENST00000299954 COG3Q96JB2 828 aa22.37■■□□□ 1.17
PITPNC1-201ENST00000299954 CTDP1Q9Y5B0 961 aaPredicted RBP22.37■■□□□ 1.17
PITPNC1-201ENST00000299954 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
PITPNC1-201ENST00000299954 TEFQ10587 303 aa22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 RUFY2Q8WXA3 655 aa22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 EVA1CP58658 441 aa22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 CPLX2Q6PUV4 134 aaKnown RBP22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 SASS6Q6UVJ0 657 aa22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 ANKRD20A12PQ8NF67 263 aa22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 NOL10Q9BSC4 688 aaKnown RBP22.36■■□□□ 1.17
PITPNC1-201ENST00000299954 REC8O95072 547 aa22.35■■□□□ 1.17
PITPNC1-201ENST00000299954 TTLL5Q6EMB2 1281 aa22.34■■□□□ 1.17
PITPNC1-201ENST00000299954 AMOTL1Q8IY63 956 aa22.34■■□□□ 1.17
PITPNC1-201ENST00000299954 SMC3Q9UQE7 1217 aa22.34■■□□□ 1.17
PITPNC1-201ENST00000299954 NEXNQ0ZGT2 675 aa22.34■■□□□ 1.17
PITPNC1-201ENST00000299954 TTC5Q8N0Z6 440 aa22.34■■□□□ 1.17
PITPNC1-201ENST00000299954 CCDC47Q96A33 483 aaKnown RBP22.34■■□□□ 1.17
PITPNC1-201ENST00000299954 SKIDA1Q1XH10 827 aa22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 RRP12Q5JTH9 1297 aaKnown RBP22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 SYTL4Q96C24 671 aaPredicted RBP22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 FAM43AQ8N2R8 423 aa22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 CHMP5Q9NZZ3 219 aa22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 R3HCC1Q9Y3T6 440 aaKnown RBP22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 RUFY1Q96T51 708 aa22.33■■□□□ 1.17
PITPNC1-201ENST00000299954 FYB1O15117 783 aa22.33■■□□□ 1.16
PITPNC1-201ENST00000299954 VPS37DQ86XT2 251 aa22.33■■□□□ 1.16
PITPNC1-201ENST00000299954 MNS1Q8NEH6 495 aa22.32■■□□□ 1.16
PITPNC1-201ENST00000299954 PDILTQ8N807 584 aa22.32■■□□□ 1.16
PITPNC1-201ENST00000299954 MTMR7Q9Y216 660 aa22.32■■□□□ 1.16
PITPNC1-201ENST00000299954 LNPKQ9C0E8 428 aa22.31■■□□□ 1.16
PITPNC1-201ENST00000299954 CALRP27797 417 aaKnown RBP22.31■■□□□ 1.16
PITPNC1-201ENST00000299954 RNF214Q8ND24 703 aa22.31■■□□□ 1.16
PITPNC1-201ENST00000299954 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 RIPK4P57078 832 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 CHMP4CQ96CF2 233 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 CARMIL2Q6F5E8 1435 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 TRDNQ13061 729 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 DZIP1LQ8IYY4 767 aaKnown RBP22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 DDX19BQ9UMR2 479 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
PITPNC1-201ENST00000299954 PRKRIP1Q9H875 184 aaPredicted RBP22.29■■□□□ 1.16
PITPNC1-201ENST00000299954 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
PITPNC1-201ENST00000299954 HOOK1Q9UJC3 728 aaKnown RBP22.28■■□□□ 1.16
PITPNC1-201ENST00000299954 G3BP1Q13283 466 aaKnown RBP eCLIP22.27■■□□□ 1.16
PITPNC1-201ENST00000299954 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
PITPNC1-201ENST00000299954 AK7Q96M32 723 aa22.27■■□□□ 1.16
PITPNC1-201ENST00000299954 CT47A1Q5JQC4 288 aaPredicted RBP22.26■■□□□ 1.15
PITPNC1-201ENST00000299954 ERICH2A1L162 156 aa22.26■■□□□ 1.15
PITPNC1-201ENST00000299954 LRRFIP1Q32MZ4 808 aaKnown RBP22.26■■□□□ 1.15
PITPNC1-201ENST00000299954 ZBED9Q6R2W3 1325 aa22.26■■□□□ 1.15
PITPNC1-201ENST00000299954 CCDC43Q96MW1 224 aaKnown RBP22.25■■□□□ 1.15
PITPNC1-201ENST00000299954 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
PITPNC1-201ENST00000299954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.25■■□□□ 1.15
PITPNC1-201ENST00000299954 RNF20Q5VTR2 975 aa22.25■■□□□ 1.15
PITPNC1-201ENST00000299954 CCDC73Q6ZRK6 1079 aa22.25■■□□□ 1.15
PITPNC1-201ENST00000299954 INTS3Q68E01 1043 aaKnown RBP22.24■■□□□ 1.15
PITPNC1-201ENST00000299954 C22orf23Q9BZE7 217 aa22.24■■□□□ 1.15
PITPNC1-201ENST00000299954 NEUROD6Q96NK8 337 aa22.24■■□□□ 1.15
PITPNC1-201ENST00000299954 PANK1Q8TE04 598 aa22.23■■□□□ 1.15
PITPNC1-201ENST00000299954 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
PITPNC1-201ENST00000299954 AIMP1Q12904 312 aaKnown RBP22.23■■□□□ 1.15
PITPNC1-201ENST00000299954 ZFYVE27Q5T4F4 411 aa22.23■■□□□ 1.15
PITPNC1-201ENST00000299954 DIAPH1O60610 1272 aaKnown RBP22.23■■□□□ 1.15
PITPNC1-201ENST00000299954 HMOX1P09601 288 aa22.23■■□□□ 1.15
PITPNC1-201ENST00000299954 NFKBIBQ15653 356 aa22.22■■□□□ 1.15
PITPNC1-201ENST00000299954 CAGE1Q8TC20 777 aa22.22■■□□□ 1.15
PITPNC1-201ENST00000299954 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
PITPNC1-201ENST00000299954 ARGLU1Q9NWB6 273 aaPredicted RBP22.22■■□□□ 1.15
PITPNC1-201ENST00000299954 WASHC4Q2M389 1173 aa22.21■■□□□ 1.15
PITPNC1-201ENST00000299954 KRI1Q8N9T8 703 aaKnown RBP22.21■■□□□ 1.15
PITPNC1-201ENST00000299954 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
PITPNC1-201ENST00000299954 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
PITPNC1-201ENST00000299954 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
PITPNC1-201ENST00000299954 ODF2Q5BJF6 829 aa22.2■■□□□ 1.14
PITPNC1-201ENST00000299954 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
PITPNC1-201ENST00000299954 NASPP49321 788 aaPredicted RBP22.19■■□□□ 1.14
PITPNC1-201ENST00000299954 USP47Q96K76 1375 aa22.19■■□□□ 1.14
PITPNC1-201ENST00000299954 HSP90B2PQ58FF3 399 aa22.19■■□□□ 1.14
PITPNC1-201ENST00000299954 MAP7D2Q96T17 732 aa22.19■■□□□ 1.14
PITPNC1-201ENST00000299954 NUCB2P80303 420 aa22.19■■□□□ 1.14
PITPNC1-201ENST00000299954 API5Q9BZZ5 524 aaKnown RBP22.18■■□□□ 1.14
PITPNC1-201ENST00000299954 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
PITPNC1-201ENST00000299954 SAFBQ15424 915 aaKnown RBP eCLIP22.18■■□□□ 1.14
PITPNC1-201ENST00000299954 EPS15P42566 896 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms