RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 E9PSI1 815 aa16.63■□□□□ 0.25
TVP23A-201ENST00000299866 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
TVP23A-201ENST00000299866 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
TVP23A-201ENST00000299866 PLEKHD1A6NEE1 506 aa16.63■□□□□ 0.25
TVP23A-201ENST00000299866 TBC1D32Q96NH3 1257 aa16.63■□□□□ 0.25
TVP23A-201ENST00000299866 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
TVP23A-201ENST00000299866 FSD2A1L4K1 749 aa16.62■□□□□ 0.25
TVP23A-201ENST00000299866 GPRASP1Q5JY77 1395 aa16.62■□□□□ 0.25
TVP23A-201ENST00000299866 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
TVP23A-201ENST00000299866 CENPJQ9HC77 1338 aaPredicted RBP16.62■□□□□ 0.25
TVP23A-201ENST00000299866 MAGI2Q86UL8 1455 aa16.62■□□□□ 0.25
TVP23A-201ENST00000299866 ITSN2Q9NZM3 1697 aa16.61■□□□□ 0.25
TVP23A-201ENST00000299866 TRAK2O60296 914 aa16.61■□□□□ 0.25
TVP23A-201ENST00000299866 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
TVP23A-201ENST00000299866 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
TVP23A-201ENST00000299866 NEUROD2Q15784 382 aa16.6■□□□□ 0.25
TVP23A-201ENST00000299866 CROCC2H7BZ55 1655 aa16.6■□□□□ 0.25
TVP23A-201ENST00000299866 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
TVP23A-201ENST00000299866 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
TVP23A-201ENST00000299866 A2MP01023 1474 aa16.6■□□□□ 0.25
TVP23A-201ENST00000299866 TNNQ9UQP3 1299 aa16.59■□□□□ 0.25
TVP23A-201ENST00000299866 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
TVP23A-201ENST00000299866 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.25
TVP23A-201ENST00000299866 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
TVP23A-201ENST00000299866 BCL2L13Q9BXK5 485 aa16.58■□□□□ 0.24
TVP23A-201ENST00000299866 PTPRGP23470 1445 aa16.58■□□□□ 0.24
TVP23A-201ENST00000299866 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
TVP23A-201ENST00000299866 RRP9O43818 475 aaKnown RBP16.57■□□□□ 0.24
TVP23A-201ENST00000299866 MFAP1P55081 439 aaKnown RBP16.57■□□□□ 0.24
TVP23A-201ENST00000299866 FAM135AQ9P2D6 1515 aa16.56■□□□□ 0.24
TVP23A-201ENST00000299866 MRE11P49959 708 aa16.56■□□□□ 0.24
TVP23A-201ENST00000299866 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
TVP23A-201ENST00000299866 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
TVP23A-201ENST00000299866 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
TVP23A-201ENST00000299866 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
TVP23A-201ENST00000299866 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
TVP23A-201ENST00000299866 GRPEL1Q9HAV7 217 aa16.55■□□□□ 0.24
TVP23A-201ENST00000299866 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
TVP23A-201ENST00000299866 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
TVP23A-201ENST00000299866 ESPNB1AK53 854 aa16.54■□□□□ 0.24
TVP23A-201ENST00000299866 RLBP1P12271 317 aa16.54■□□□□ 0.24
TVP23A-201ENST00000299866 PLA2R1Q13018 1463 aa16.53■□□□□ 0.24
TVP23A-201ENST00000299866 FBLN2P98095 1184 aa16.53■□□□□ 0.24
TVP23A-201ENST00000299866 C22orf23Q9BZE7 217 aa16.53■□□□□ 0.24
TVP23A-201ENST00000299866 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
TVP23A-201ENST00000299866 TRIM44Q96DX7 344 aaPredicted RBP16.52■□□□□ 0.24
TVP23A-201ENST00000299866 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.24
TVP23A-201ENST00000299866 WWC1Q8IX03 1113 aa16.52■□□□□ 0.23
TVP23A-201ENST00000299866 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
TVP23A-201ENST00000299866 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
TVP23A-201ENST00000299866 VIRMAQ69YN4 1812 aaKnown RBP16.5■□□□□ 0.23
TVP23A-201ENST00000299866 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
TVP23A-201ENST00000299866 RARSP54136 660 aaKnown RBP16.49■□□□□ 0.23
TVP23A-201ENST00000299866 PIK3C2GO75747 1445 aa16.49■□□□□ 0.23
TVP23A-201ENST00000299866 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
TVP23A-201ENST00000299866 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
TVP23A-201ENST00000299866 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
TVP23A-201ENST00000299866 ASXL1Q8IXJ9 1541 aa16.47■□□□□ 0.23
TVP23A-201ENST00000299866 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
TVP23A-201ENST00000299866 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
TVP23A-201ENST00000299866 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
TVP23A-201ENST00000299866 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
TVP23A-201ENST00000299866 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
TVP23A-201ENST00000299866 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
TVP23A-201ENST00000299866 ABCC10Q5T3U5 1492 aa16.44■□□□□ 0.22
TVP23A-201ENST00000299866 CCDC141Q6ZP82 1450 aa16.44■□□□□ 0.22
TVP23A-201ENST00000299866 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
TVP23A-201ENST00000299866 ABCC2Q92887 1545 aa16.43■□□□□ 0.22
TVP23A-201ENST00000299866 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
TVP23A-201ENST00000299866 LAMC1P11047 1609 aa16.42■□□□□ 0.22
TVP23A-201ENST00000299866 NUP160Q12769 1436 aa16.42■□□□□ 0.22
TVP23A-201ENST00000299866 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
TVP23A-201ENST00000299866 TNPO1Q92973 898 aaKnown RBP16.41■□□□□ 0.22
TVP23A-201ENST00000299866 TCP11L2Q8N4U5 519 aa16.41■□□□□ 0.22
TVP23A-201ENST00000299866 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
TVP23A-201ENST00000299866 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
TVP23A-201ENST00000299866 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
TVP23A-201ENST00000299866 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
TVP23A-201ENST00000299866 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
TVP23A-201ENST00000299866 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
TVP23A-201ENST00000299866 ATP10BO94823 1461 aa16.39■□□□□ 0.21
TVP23A-201ENST00000299866 AAMPQ13685 434 aa16.39■□□□□ 0.21
TVP23A-201ENST00000299866 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
TVP23A-201ENST00000299866 MVPQ14764 893 aaKnown RBP16.38■□□□□ 0.21
TVP23A-201ENST00000299866 CARMIL2Q6F5E8 1435 aa16.38■□□□□ 0.21
TVP23A-201ENST00000299866 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
TVP23A-201ENST00000299866 TPM2P07951 284 aa16.38■□□□□ 0.21
TVP23A-201ENST00000299866 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
TVP23A-201ENST00000299866 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
TVP23A-201ENST00000299866 MYO5CQ9NQX4 1742 aa16.37■□□□□ 0.21
TVP23A-201ENST00000299866 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
TVP23A-201ENST00000299866 RSPH4AQ5TD94 716 aa16.37■□□□□ 0.21
TVP23A-201ENST00000299866 GBP4Q96PP9 640 aa16.37■□□□□ 0.21
TVP23A-201ENST00000299866 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
TVP23A-201ENST00000299866 DZIP1LQ8IYY4 767 aaKnown RBP16.36■□□□□ 0.21
TVP23A-201ENST00000299866 ZMYM3Q14202 1370 aa16.36■□□□□ 0.21
TVP23A-201ENST00000299866 RBM10P98175 930 aaKnown RBP16.36■□□□□ 0.21
TVP23A-201ENST00000299866 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
TVP23A-201ENST00000299866 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
TVP23A-201ENST00000299866 SYNMO15061 1565 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms