RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MAGI2Q86UL8 1455 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 SCAPERQ9BY12 1400 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 KANK1Q14678 1352 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 GGT6Q6P531 493 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
CTDP1-202ENST00000299543 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
CTDP1-202ENST00000299543 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.39
CTDP1-202ENST00000299543 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
CTDP1-202ENST00000299543 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
CTDP1-202ENST00000299543 ARXQ96QS3 562 aa17.51■□□□□ 0.39
CTDP1-202ENST00000299543 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
CTDP1-202ENST00000299543 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
CTDP1-202ENST00000299543 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 E9PCH4 1651 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 BCAR3O75815 825 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 RRP7AQ9Y3A4 280 aaKnown RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 UNC13BO14795 1591 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
CTDP1-202ENST00000299543 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
CTDP1-202ENST00000299543 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
CTDP1-202ENST00000299543 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
CTDP1-202ENST00000299543 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
CTDP1-202ENST00000299543 MS4A1P11836 297 aa17.46■□□□□ 0.39
CTDP1-202ENST00000299543 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTDP1-202ENST00000299543 GSE1Q14687 1217 aa17.46■□□□□ 0.39
CTDP1-202ENST00000299543 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
CTDP1-202ENST00000299543 ZMYND15Q9H091 742 aa17.45■□□□□ 0.38
CTDP1-202ENST00000299543 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
CTDP1-202ENST00000299543 EIF3AQ14152 1382 aaKnown RBP17.45■□□□□ 0.38
CTDP1-202ENST00000299543 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
CTDP1-202ENST00000299543 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
CTDP1-202ENST00000299543 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
CTDP1-202ENST00000299543 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
CTDP1-202ENST00000299543 ATP10AO60312 1499 aa17.44■□□□□ 0.38
CTDP1-202ENST00000299543 MORC1Q86VD1 984 aa17.43■□□□□ 0.38
CTDP1-202ENST00000299543 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
CTDP1-202ENST00000299543 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
CTDP1-202ENST00000299543 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTDP1-202ENST00000299543 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 FANCAO15360 1455 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 ABCC1P33527 1531 aa17.39■□□□□ 0.38
CTDP1-202ENST00000299543 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.37
CTDP1-202ENST00000299543 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
CTDP1-202ENST00000299543 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
CTDP1-202ENST00000299543 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
CTDP1-202ENST00000299543 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
CTDP1-202ENST00000299543 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
CTDP1-202ENST00000299543 E9PSI1 815 aa17.37■□□□□ 0.37
CTDP1-202ENST00000299543 STK26Q9P289 416 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
CTDP1-202ENST00000299543 DDRGK1Q96HY6 314 aa17.35■□□□□ 0.37
CTDP1-202ENST00000299543 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
CTDP1-202ENST00000299543 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
CTDP1-202ENST00000299543 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
CTDP1-202ENST00000299543 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
CTDP1-202ENST00000299543 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.37
CTDP1-202ENST00000299543 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.37
CTDP1-202ENST00000299543 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
CTDP1-202ENST00000299543 MADDQ8WXG6 1647 aa17.33■□□□□ 0.36
CTDP1-202ENST00000299543 PTPRTO14522 1441 aa17.33■□□□□ 0.36
CTDP1-202ENST00000299543 MTHFSP49914 203 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 NOS1P29475 1434 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 LAMC1P11047 1609 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 TRPM2O94759 1503 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
CTDP1-202ENST00000299543 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 IGHDP01880 384 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 INSRP06213 1382 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-202ENST00000299543 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTDP1-202ENST00000299543 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
CTDP1-202ENST00000299543 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-202ENST00000299543 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
CTDP1-202ENST00000299543 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-202ENST00000299543 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
CTDP1-202ENST00000299543 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
CTDP1-202ENST00000299543 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
CTDP1-202ENST00000299543 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
CTDP1-202ENST00000299543 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
CTDP1-202ENST00000299543 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
CTDP1-202ENST00000299543 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
CTDP1-202ENST00000299543 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
CTDP1-202ENST00000299543 CFAP53Q96M91 514 aa17.27■□□□□ 0.36
CTDP1-202ENST00000299543 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.35
CTDP1-202ENST00000299543 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms