RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
GABRB3-201ENST00000299267 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-201ENST00000299267 CTTNBP2Q8WZ74 1663 aa13.1□□□□□ -0.31
GABRB3-201ENST00000299267 ATF3P18847 181 aa13.09□□□□□ -0.31
GABRB3-201ENST00000299267 TARBP1Q13395 1621 aaKnown RBP13.09□□□□□ -0.31
GABRB3-201ENST00000299267 SMC4Q9NTJ3 1288 aa13.08□□□□□ -0.32
GABRB3-201ENST00000299267 ADAMTS8Q9UP79 889 aa13.08□□□□□ -0.32
GABRB3-201ENST00000299267 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
GABRB3-201ENST00000299267 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-201ENST00000299267 NPHP1O15259 732 aa13.07□□□□□ -0.32
GABRB3-201ENST00000299267 DHX29Q7Z478 1369 aaKnown RBP13.07□□□□□ -0.32
GABRB3-201ENST00000299267 SYCP2Q9BX26 1530 aa13.07□□□□□ -0.32
GABRB3-201ENST00000299267 ANKLE2Q86XL3 938 aa13.07□□□□□ -0.32
GABRB3-201ENST00000299267 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
GABRB3-201ENST00000299267 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
GABRB3-201ENST00000299267 CEP170Q5SW79 1584 aa13.06□□□□□ -0.32
GABRB3-201ENST00000299267 WDR7Q9Y4E6 1490 aa13.06□□□□□ -0.32
GABRB3-201ENST00000299267 ABTB2Q8N961 1025 aa13.06□□□□□ -0.32
GABRB3-201ENST00000299267 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
GABRB3-201ENST00000299267 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
GABRB3-201ENST00000299267 OS9Q13438 667 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-201ENST00000299267 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
GABRB3-201ENST00000299267 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
GABRB3-201ENST00000299267 NBR1Q14596 966 aa13.05□□□□□ -0.32
GABRB3-201ENST00000299267 EVA1CP58658 441 aa13.04□□□□□ -0.32
GABRB3-201ENST00000299267 RIPK4P57078 832 aa13.03□□□□□ -0.32
GABRB3-201ENST00000299267 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
GABRB3-201ENST00000299267 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
GABRB3-201ENST00000299267 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
GABRB3-201ENST00000299267 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
GABRB3-201ENST00000299267 ABCC2Q92887 1545 aa13□□□□□ -0.33
GABRB3-201ENST00000299267 RRS1Q15050 365 aaKnown RBP13□□□□□ -0.33
GABRB3-201ENST00000299267 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
GABRB3-201ENST00000299267 STK31Q9BXU1 1019 aa13□□□□□ -0.33
GABRB3-201ENST00000299267 IPO8O15397 1037 aaKnown RBP13□□□□□ -0.33
GABRB3-201ENST00000299267 NLRP2Q9NX02 1062 aa13□□□□□ -0.33
GABRB3-201ENST00000299267 MS4A1P11836 297 aa13□□□□□ -0.33
GABRB3-201ENST00000299267 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
GABRB3-201ENST00000299267 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
GABRB3-201ENST00000299267 NOS1P29475 1434 aa12.99□□□□□ -0.33
GABRB3-201ENST00000299267 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
GABRB3-201ENST00000299267 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
GABRB3-201ENST00000299267 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
GABRB3-201ENST00000299267 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
GABRB3-201ENST00000299267 FBLN1P23142 703 aa12.98□□□□□ -0.33
GABRB3-201ENST00000299267 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-201ENST00000299267 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
GABRB3-201ENST00000299267 TEFQ10587 303 aa12.98□□□□□ -0.33
GABRB3-201ENST00000299267 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
GABRB3-201ENST00000299267 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
GABRB3-201ENST00000299267 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
GABRB3-201ENST00000299267 MAGI3Q5TCQ9 1506 aa12.97□□□□□ -0.33
GABRB3-201ENST00000299267 EXOC6Q8TAG9 804 aa12.97□□□□□ -0.33
GABRB3-201ENST00000299267 TAOK2Q9UL54 1235 aa12.97□□□□□ -0.33
GABRB3-201ENST00000299267 RPRD2Q5VT52 1461 aaKnown RBP12.96□□□□□ -0.33
GABRB3-201ENST00000299267 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
GABRB3-201ENST00000299267 A2MP01023 1474 aa12.96□□□□□ -0.33
GABRB3-201ENST00000299267 FOXO3O43524 673 aa12.96□□□□□ -0.34
GABRB3-201ENST00000299267 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.34
GABRB3-201ENST00000299267 RUNDC1Q96C34 613 aa12.96□□□□□ -0.34
GABRB3-201ENST00000299267 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
GABRB3-201ENST00000299267 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
GABRB3-201ENST00000299267 ZC3H6P61129 1189 aaKnown RBP12.94□□□□□ -0.34
GABRB3-201ENST00000299267 E9PSI1 815 aa12.94□□□□□ -0.34
GABRB3-201ENST00000299267 HSPA2P54652 639 aa12.94□□□□□ -0.34
GABRB3-201ENST00000299267 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
GABRB3-201ENST00000299267 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
GABRB3-201ENST00000299267 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
GABRB3-201ENST00000299267 TPRNQ4KMQ1 711 aa12.93□□□□□ -0.34
GABRB3-201ENST00000299267 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
GABRB3-201ENST00000299267 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
GABRB3-201ENST00000299267 MAPKBP1O60336 1514 aa12.93□□□□□ -0.34
GABRB3-201ENST00000299267 ZNF518AQ6AHZ1 1483 aa12.93□□□□□ -0.34
GABRB3-201ENST00000299267 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
GABRB3-201ENST00000299267 C14orf93Q9H972 538 aaKnown RBP12.92□□□□□ -0.34
GABRB3-201ENST00000299267 NME9Q86XW9 330 aa12.92□□□□□ -0.34
GABRB3-201ENST00000299267 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
GABRB3-201ENST00000299267 GPRASP1Q5JY77 1395 aa12.92□□□□□ -0.34
GABRB3-201ENST00000299267 CHMP4BQ9H444 224 aaKnown RBP12.91□□□□□ -0.34
GABRB3-201ENST00000299267 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
GABRB3-201ENST00000299267 ERCC6L2Q5T890 1561 aa12.91□□□□□ -0.34
GABRB3-201ENST00000299267 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-201ENST00000299267 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-201ENST00000299267 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-201ENST00000299267 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
GABRB3-201ENST00000299267 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
GABRB3-201ENST00000299267 SAMD9Q5K651 1589 aa12.9□□□□□ -0.34
GABRB3-201ENST00000299267 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
GABRB3-201ENST00000299267 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
GABRB3-201ENST00000299267 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
GABRB3-201ENST00000299267 DISP3Q9P2K9 1392 aa12.89□□□□□ -0.35
GABRB3-201ENST00000299267 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
GABRB3-201ENST00000299267 SPRYD3Q8NCJ5 442 aa12.88□□□□□ -0.35
GABRB3-201ENST00000299267 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
GABRB3-201ENST00000299267 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
GABRB3-201ENST00000299267 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-201ENST00000299267 TNRQ92752 1358 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-201ENST00000299267 PANK1Q8TE04 598 aa12.87□□□□□ -0.35
GABRB3-201ENST00000299267 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms