RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 FAM184AQ8NB25 1140 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 PAIP2Q9BPZ3 127 aaKnown RBP9.05□□□□□ -0.96
TSC1-201ENST00000298552 SRPK2P78362 688 aaKnown RBP9.05□□□□□ -0.96
TSC1-201ENST00000298552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.05□□□□□ -0.961e-7■□□□□ 9.3
TSC1-201ENST00000298552 SMARCE1Q969G3 411 aa9.05□□□□□ -0.96
TSC1-201ENST00000298552 NEBLO76041 1014 aa9.04□□□□□ -0.96
TSC1-201ENST00000298552 XBP1P17861 261 aa9.04□□□□□ -0.96
TSC1-201ENST00000298552 TRIM63Q969Q1 353 aa9.04□□□□□ -0.96
TSC1-201ENST00000298552 GIMAP7Q8NHV1 300 aa9.04□□□□□ -0.96
TSC1-201ENST00000298552 STK31Q9BXU1 1019 aa9.04□□□□□ -0.96
TSC1-201ENST00000298552 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
TSC1-201ENST00000298552 PABPN1LA6NDY0 278 aaKnown RBP9.04□□□□□ -0.96
TSC1-201ENST00000298552 DZIP1LQ8IYY4 767 aaKnown RBP9.04□□□□□ -0.96
TSC1-201ENST00000298552 SAFBQ15424 915 aaKnown RBP eCLIP9.03□□□□□ -0.96
TSC1-201ENST00000298552 EIF3DO15371 548 aaKnown RBP eCLIP9.03□□□□□ -0.96
TSC1-201ENST00000298552 CETN2P41208 172 aa9.03□□□□□ -0.96
TSC1-201ENST00000298552 FAM114A1Q8IWE2 563 aa9.03□□□□□ -0.96
TSC1-201ENST00000298552 ERICH2A1L162 156 aa9.02□□□□□ -0.96
TSC1-201ENST00000298552 LMOD3Q0VAK6 560 aa9.02□□□□□ -0.96
TSC1-201ENST00000298552 CNGA1P29973 690 aa9.02□□□□□ -0.96
TSC1-201ENST00000298552 NASPP49321 788 aaPredicted RBP9.02□□□□□ -0.96
TSC1-201ENST00000298552 CCDC6Q16204 474 aa9.02□□□□□ -0.96
TSC1-201ENST00000298552 WDHD1O75717 1129 aaPredicted RBP9.02□□□□□ -0.97
TSC1-201ENST00000298552 HSP90AB3PQ58FF7 597 aa9.02□□□□□ -0.97
TSC1-201ENST00000298552 KIF7Q2M1P5 1343 aa9.02□□□□□ -0.97
TSC1-201ENST00000298552 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
TSC1-201ENST00000298552 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
TSC1-201ENST00000298552 SEPT6Q14141 434 aa9.02□□□□□ -0.97
TSC1-201ENST00000298552 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.02□□□□□ -0.97
TSC1-201ENST00000298552 ANKRD62A6NC57 917 aa9.01□□□□□ -0.97
TSC1-201ENST00000298552 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
TSC1-201ENST00000298552 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
TSC1-201ENST00000298552 LRRC45Q96CN5 670 aa9.01□□□□□ -0.97
TSC1-201ENST00000298552 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
TSC1-201ENST00000298552 SREK1Q8WXA9 508 aaKnown RBP9.01□□□□□ -0.97
TSC1-201ENST00000298552 RUFY2Q8WXA3 655 aa9□□□□□ -0.97
TSC1-201ENST00000298552 KAT6AQ92794 2004 aa9□□□□□ -0.97
TSC1-201ENST00000298552 CT47B1P0C2W7 299 aaPredicted RBP9□□□□□ -0.97
TSC1-201ENST00000298552 FAM107BQ9H098 131 aa9□□□□□ -0.97
TSC1-201ENST00000298552 TRDNQ13061 729 aa9□□□□□ -0.97
TSC1-201ENST00000298552 HOOK3Q86VS8 718 aa9□□□□□ -0.97
TSC1-201ENST00000298552 CFAP65Q6ZU64 1925 aaKnown RBP9□□□□□ -0.97
TSC1-201ENST00000298552 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
TSC1-201ENST00000298552 CEP112Q8N8E3 955 aa9□□□□□ -0.97
TSC1-201ENST00000298552 DDX12PQ92771 950 aa9□□□□□ -0.97
TSC1-201ENST00000298552 RNF20Q5VTR2 975 aa8.99□□□□□ -0.97
TSC1-201ENST00000298552 OLFM4Q6UX06 510 aa8.99□□□□□ -0.97
TSC1-201ENST00000298552 PRPF31Q8WWY3 499 aaKnown RBP8.99□□□□□ -0.97
TSC1-201ENST00000298552 TOMM22Q9NS69 142 aa8.99□□□□□ -0.97
TSC1-201ENST00000298552 EPB41L2O43491 1005 aaKnown RBP8.99□□□□□ -0.97
TSC1-201ENST00000298552 FERP16591 822 aa8.99□□□□□ -0.97
TSC1-201ENST00000298552 FRAT1Q92837 279 aaPredicted RBP8.99□□□□□ -0.97
TSC1-201ENST00000298552 LETM1O95202 739 aaPredicted RBP8.99□□□□□ -0.97
TSC1-201ENST00000298552 RGS3P49796 1198 aa8.99□□□□□ -0.97
TSC1-201ENST00000298552 BMS1Q14692 1282 aaKnown RBP8.99□□□□□ -0.97
TSC1-201ENST00000298552 FERMT1Q9BQL6 677 aa8.99□□□□□ -0.97
TSC1-201ENST00000298552 DAAM2Q86T65 1068 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 SSX2IPQ9Y2D8 614 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 GOLGA6L9A6NEM1 432 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 TAX1BP1Q86VP1 789 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 DDX11Q96FC9 970 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 PPP1R9BQ96SB3 815 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 BCL2L13Q9BXK5 485 aa8.98□□□□□ -0.97
TSC1-201ENST00000298552 SMC1AQ14683 1233 aaKnown RBP8.98□□□□□ -0.97
TSC1-201ENST00000298552 SOGA3Q5TF21 947 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 NOP2P46087 812 aaKnown RBP8.97□□□□□ -0.97
TSC1-201ENST00000298552 MTUS2Q5JR59 1369 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 MYO18AQ92614 2054 aaKnown RBP8.97□□□□□ -0.97
TSC1-201ENST00000298552 TMF1P82094 1093 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 SEPT14Q6ZU15 432 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 SSR1P43307 286 aaKnown RBP8.97□□□□□ -0.97
TSC1-201ENST00000298552 DDX10Q13206 875 aaKnown RBP8.97□□□□□ -0.97
TSC1-201ENST00000298552 ANAPC15P60006 121 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 RB1CC1Q8TDY2 1594 aa8.97□□□□□ -0.97
TSC1-201ENST00000298552 DDX46Q7L014 1031 aaKnown RBP8.96□□□□□ -0.97
TSC1-201ENST00000298552 FILIP1LQ4L180 1135 aa8.96□□□□□ -0.97
TSC1-201ENST00000298552 ZNF526Q8TF50 670 aaPredicted RBP8.96□□□□□ -0.97
TSC1-201ENST00000298552 MAGEC2Q9UBF1 373 aaPredicted RBP8.96□□□□□ -0.97
TSC1-201ENST00000298552 CPLX1O14810 134 aa8.96□□□□□ -0.98
TSC1-201ENST00000298552 GSE1Q14687 1217 aa8.96□□□□□ -0.98
TSC1-201ENST00000298552 NCAPGQ9BPX3 1015 aa8.96□□□□□ -0.98
TSC1-201ENST00000298552 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.98
TSC1-201ENST00000298552 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
TSC1-201ENST00000298552 CEP135Q66GS9 1140 aa8.96□□□□□ -0.98
TSC1-201ENST00000298552 VPS37DQ86XT2 251 aa8.96□□□□□ -0.98
TSC1-201ENST00000298552 MCM3P25205 808 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 C6orf163Q5TEZ5 329 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 RNF168Q8IYW5 571 aaPredicted RBP8.95□□□□□ -0.98
TSC1-201ENST00000298552 KDM2AQ9Y2K7 1162 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 STIM1Q13586 685 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 ZKSCAN1P17029 563 aaPredicted RBP8.95□□□□□ -0.98
TSC1-201ENST00000298552 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
TSC1-201ENST00000298552 PSMD1Q99460 953 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 U2SURPO15042 1029 aaKnown RBP8.95□□□□□ -0.98
TSC1-201ENST00000298552 SLC3A2P08195 630 aaKnown RBP8.95□□□□□ -0.98
TSC1-201ENST00000298552 SWAP70Q9UH65 585 aa8.95□□□□□ -0.98
TSC1-201ENST00000298552 MAP3K7CLP57077 242 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 310.1 ms