RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 MYOM2P54296 1465 aa35.47■■■■□ 3.27
SDCCAG3-201ENST00000298537 IDI1Q13907 227 aa35.46■■■■□ 3.27
SDCCAG3-201ENST00000298537 NUTM2DQ5VT03 806 aaPredicted RBP35.46■■■■□ 3.27
SDCCAG3-201ENST00000298537 REREQ9P2R6 1566 aa35.46■■■■□ 3.27
SDCCAG3-201ENST00000298537 PIK3C2BO00750 1634 aa35.44■■■■□ 3.26
SDCCAG3-201ENST00000298537 AGLP35573 1532 aa35.43■■■■□ 3.26
SDCCAG3-201ENST00000298537 ARHGEF40Q8TER5 1519 aa35.43■■■■□ 3.26
SDCCAG3-201ENST00000298537 IQGAP1P46940 1657 aa35.41■■■■□ 3.26
SDCCAG3-201ENST00000298537 GTF3C3Q9Y5Q9 886 aa35.39■■■■□ 3.26
SDCCAG3-201ENST00000298537 NRXN1Q9ULB1 1477 aa35.39■■■■□ 3.26
SDCCAG3-201ENST00000298537 PREX1Q8TCU6 1659 aa35.38■■■■□ 3.25
SDCCAG3-201ENST00000298537 SCAF11Q99590 1463 aaKnown RBP35.38■■■■□ 3.25
SDCCAG3-201ENST00000298537 PPLO60437 1756 aa35.37■■■■□ 3.25
SDCCAG3-201ENST00000298537 SENP3Q9H4L4 574 aaPredicted RBP35.37■■■■□ 3.25
SDCCAG3-201ENST00000298537 CLTCQ00610 1675 aaKnown RBP35.35■■■■□ 3.25
SDCCAG3-201ENST00000298537 KIAA1210Q9ULL0 1709 aa35.33■■■■□ 3.25
SDCCAG3-201ENST00000298537 PIK3C2GO75747 1445 aa35.3■■■■□ 3.24
SDCCAG3-201ENST00000298537 TMF1P82094 1093 aa35.3■■■■□ 3.24
SDCCAG3-201ENST00000298537 TRHP20396 242 aaPredicted RBP35.29■■■■□ 3.24
SDCCAG3-201ENST00000298537 ERVK-7P63135 1459 aa35.29■■■■□ 3.24
SDCCAG3-201ENST00000298537 SLC52A1Q9NWF4 448 aa35.29■■■■□ 3.24
SDCCAG3-201ENST00000298537 NEXMIFQ5QGS0 1516 aa35.27■■■■□ 3.24
SDCCAG3-201ENST00000298537 TMEM132EQ6IEE7 984 aa35.27■■■■□ 3.24
SDCCAG3-201ENST00000298537 MYO5BQ9ULV0 1848 aa35.27■■■■□ 3.24
SDCCAG3-201ENST00000298537 RPGRIP1LQ68CZ1 1315 aa35.27■■■■□ 3.24
SDCCAG3-201ENST00000298537 C14orf93Q9H972 538 aaKnown RBP35.24■■■■□ 3.23
SDCCAG3-201ENST00000298537 PPP6R1Q9UPN7 881 aa35.23■■■■□ 3.23
SDCCAG3-201ENST00000298537 MRS2Q9HD23 443 aa35.22■■■■□ 3.23
SDCCAG3-201ENST00000298537 TMEM131LA2VDJ0 1609 aa35.21■■■■□ 3.23
SDCCAG3-201ENST00000298537 TRAK1Q9UPV9 953 aa35.18■■■■□ 3.22
SDCCAG3-201ENST00000298537 PER1O15534 1290 aaPredicted RBP35.17■■■■□ 3.22
SDCCAG3-201ENST00000298537 PANK3Q9H999 370 aa35.17■■■■□ 3.22
SDCCAG3-201ENST00000298537 ADGRB1O14514 1584 aa35.16■■■■□ 3.22
SDCCAG3-201ENST00000298537 EIF3AQ14152 1382 aaKnown RBP35.16■■■■□ 3.22
SDCCAG3-201ENST00000298537 VGFO15240 615 aaPredicted RBP35.16■■■■□ 3.22
SDCCAG3-201ENST00000298537 FAM9BQ8IZU0 186 aa35.15■■■■□ 3.22
SDCCAG3-201ENST00000298537 ZMYM3Q14202 1370 aa35.13■■■■□ 3.21
SDCCAG3-201ENST00000298537 SETBP1Q9Y6X0 1596 aa35.12■■■■□ 3.21
SDCCAG3-201ENST00000298537 SPATA31D1Q6ZQQ2 1576 aa35.11■■■■□ 3.21
SDCCAG3-201ENST00000298537 ESF1Q9H501 851 aaKnown RBP35.1■■■■□ 3.21
SDCCAG3-201ENST00000298537 STAG3Q9UJ98 1225 aa35.1■■■■□ 3.21
SDCCAG3-201ENST00000298537 HNRNPUQ00839 825 aaKnown RBP eCLIP35.07■■■■□ 3.21
SDCCAG3-201ENST00000298537 CC2D1BQ5T0F9 858 aaKnown RBP35.04■■■■□ 3.2
SDCCAG3-201ENST00000298537 CENPJQ9HC77 1338 aaPredicted RBP35.03■■■■□ 3.2
SDCCAG3-201ENST00000298537 ZFYVE9O95405 1425 aa35.02■■■■□ 3.2
SDCCAG3-201ENST00000298537 A2ML1A8K2U0 1454 aa35.01■■■■□ 3.2
SDCCAG3-201ENST00000298537 MYO3AQ8NEV4 1616 aa35■■■■□ 3.19
SDCCAG3-201ENST00000298537 ASXL1Q8IXJ9 1541 aa35■■■■□ 3.19
SDCCAG3-201ENST00000298537 MYOM1P52179 1685 aa34.98■■■■□ 3.19
SDCCAG3-201ENST00000298537 CDCA8Q53HL2 280 aa34.97■■■■□ 3.19
SDCCAG3-201ENST00000298537 STK26Q9P289 416 aa34.97■■■■□ 3.19
SDCCAG3-201ENST00000298537 KTN1Q86UP2 1357 aaKnown RBP34.96■■■■□ 3.19
SDCCAG3-201ENST00000298537 CEBPAP49715 358 aaPredicted RBP34.96■■■■□ 3.19
SDCCAG3-201ENST00000298537 PARD3Q8TEW0 1356 aa34.95■■■■□ 3.19
SDCCAG3-201ENST00000298537 RALBP1Q15311 655 aa34.95■■■■□ 3.19
SDCCAG3-201ENST00000298537 MYBBP1AQ9BQG0 1328 aaKnown RBP34.94■■■■□ 3.18
SDCCAG3-201ENST00000298537 KDM5AP29375 1690 aaKnown RBP34.93■■■■□ 3.18
SDCCAG3-201ENST00000298537 SAFB2Q14151 953 aaKnown RBP eCLIP34.93■■■■□ 3.18
SDCCAG3-201ENST00000298537 QRICH2Q9H0J4 1663 aa34.93■■■■□ 3.18
SDCCAG3-201ENST00000298537 PLPPR3Q6T4P5 718 aa34.92■■■■□ 3.18
SDCCAG3-201ENST00000298537 SBNO2Q9Y2G9 1366 aa34.91■■■■□ 3.18
SDCCAG3-201ENST00000298537 RIMS2Q9UQ26 1411 aa34.9■■■■□ 3.18
SDCCAG3-201ENST00000298537 TMC1Q8TDI8 760 aa34.9■■■■□ 3.18
SDCCAG3-201ENST00000298537 SENP3-EIF4A1A0A087X0R7 540 aa34.89■■■■□ 3.18
SDCCAG3-201ENST00000298537 ARHGEF28Q8N1W1 1705 aaKnown RBP34.89■■■■□ 3.18
SDCCAG3-201ENST00000298537 TNRQ92752 1358 aa34.88■■■■□ 3.17
SDCCAG3-201ENST00000298537 DNAJC5Q9H3Z4 198 aa34.88■■■■□ 3.17
SDCCAG3-201ENST00000298537 PNISRQ8TF01 805 aaKnown RBP34.87■■■■□ 3.17
SDCCAG3-201ENST00000298537 ALKQ9UM73 1620 aa34.86■■■■□ 3.17
SDCCAG3-201ENST00000298537 KNSTRNQ9Y448 316 aa34.84■■■■□ 3.17
SDCCAG3-201ENST00000298537 AMER1Q5JTC6 1135 aaPredicted RBP34.84■■■■□ 3.17
SDCCAG3-201ENST00000298537 BRD4O60885 1362 aaPredicted RBP34.81■■■■□ 3.16
SDCCAG3-201ENST00000298537 CARD14Q9BXL6 1004 aa34.81■■■■□ 3.16
SDCCAG3-201ENST00000298537 PTPRMP28827 1452 aa34.8■■■■□ 3.16
SDCCAG3-201ENST00000298537 YTHDC2Q9H6S0 1430 aaKnown RBP34.8■■■■□ 3.16
SDCCAG3-201ENST00000298537 SLC24A1O60721 1099 aa34.8■■■■□ 3.16
SDCCAG3-201ENST00000298537 NLRP13Q86W25 1043 aa34.79■■■■□ 3.16
SDCCAG3-201ENST00000298537 SLC12A5Q9H2X9 1139 aa34.78■■■■□ 3.16
SDCCAG3-201ENST00000298537 TULP4Q9NRJ4 1543 aa34.78■■■■□ 3.16
SDCCAG3-201ENST00000298537 PRAM1Q96QH2 718 aa34.76■■■■□ 3.16
SDCCAG3-201ENST00000298537 CABP2Q9NPB3 220 aa34.74■■■■□ 3.15
SDCCAG3-201ENST00000298537 MINK1Q8N4C8 1332 aaPredicted RBP34.72■■■■□ 3.15
SDCCAG3-201ENST00000298537 NRXN3Q9Y4C0 1643 aa34.71■■■■□ 3.15
SDCCAG3-201ENST00000298537 C3P01024 1663 aa34.7■■■■□ 3.14
SDCCAG3-201ENST00000298537 UBR1Q8IWV7 1749 aa34.7■■■■□ 3.14
SDCCAG3-201ENST00000298537 SETD1AO15047 1707 aaKnown RBP34.69■■■■□ 3.14
SDCCAG3-201ENST00000298537 EVC2Q86UK5 1308 aa34.69■■■■□ 3.14
SDCCAG3-201ENST00000298537 LRPPRCP42704 1394 aaKnown RBP34.69■■■■□ 3.14
SDCCAG3-201ENST00000298537 FER1L4A9Z1Z3 1794 aa34.68■■■■□ 3.14
SDCCAG3-201ENST00000298537 POGKQ9P215 609 aa34.67■■■■□ 3.14
SDCCAG3-201ENST00000298537 ZBED9Q6R2W3 1325 aa34.67■■■■□ 3.14
SDCCAG3-201ENST00000298537 METP08581 1390 aa34.66■■■■□ 3.14
SDCCAG3-201ENST00000298537 TMEM2Q9UHN6 1383 aa34.66■■■■□ 3.14
SDCCAG3-201ENST00000298537 WAPLQ7Z5K2 1190 aa34.66■■■■□ 3.14
SDCCAG3-201ENST00000298537 PPP2R1AP30153 589 aa34.65■■■■□ 3.14
SDCCAG3-201ENST00000298537 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.64■■■■□ 3.14
SDCCAG3-201ENST00000298537 PLEKHH1Q9ULM0 1364 aa34.64■■■■□ 3.14
SDCCAG3-201ENST00000298537 LTKP29376 864 aa34.63■■■■□ 3.13
SDCCAG3-201ENST00000298537 BCANQ96GW7 911 aa34.61■■■■□ 3.13
SDCCAG3-201ENST00000298537 NSD3Q9BZ95 1437 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms