RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 SCAPERQ9BY12 1400 aa25.14■■□□□ 1.62
TRA2A-201ENST00000297071 MYOM1P52179 1685 aa25.13■■□□□ 1.61
TRA2A-201ENST00000297071 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.13■■□□□ 1.61
TRA2A-201ENST00000297071 SHROOM2Q13796 1616 aa25.13■■□□□ 1.61
TRA2A-201ENST00000297071 SENP3-EIF4A1A0A087X0R7 540 aa25.12■■□□□ 1.61
TRA2A-201ENST00000297071 ASXL1Q8IXJ9 1541 aa25.12■■□□□ 1.61
TRA2A-201ENST00000297071 CDCA8Q53HL2 280 aa25.12■■□□□ 1.61
TRA2A-201ENST00000297071 CC2D1BQ5T0F9 858 aaKnown RBP25.1■■□□□ 1.61
TRA2A-201ENST00000297071 SALL2Q9Y467 1007 aaPredicted RBP25.09■■□□□ 1.61
TRA2A-201ENST00000297071 TRPM2O94759 1503 aa25.09■■□□□ 1.61
TRA2A-201ENST00000297071 DUSP27Q5VZP5 1158 aa25.09■■□□□ 1.61
TRA2A-201ENST00000297071 NGEFQ8N5V2 710 aa25.09■■□□□ 1.61
TRA2A-201ENST00000297071 KDM5AP29375 1690 aaKnown RBP25.07■■□□□ 1.6
TRA2A-201ENST00000297071 PLIN1O60240 522 aa25.07■■□□□ 1.6
TRA2A-201ENST00000297071 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
TRA2A-201ENST00000297071 FAM161AQ3B820 660 aa25.06■■□□□ 1.6
TRA2A-201ENST00000297071 TRMT2AQ8IZ69 625 aaKnown RBP25.06■■□□□ 1.6
TRA2A-201ENST00000297071 ADAMTS8Q9UP79 889 aa25.06■■□□□ 1.6
TRA2A-201ENST00000297071 PPP2R1AP30153 589 aa25.05■■□□□ 1.6
TRA2A-201ENST00000297071 RGL3Q3MIN7 710 aa25.05■■□□□ 1.6
TRA2A-201ENST00000297071 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
TRA2A-201ENST00000297071 DEPDC5O75140 1603 aa25.05■■□□□ 1.6
TRA2A-201ENST00000297071 LAS1LQ9Y4W2 734 aaKnown RBP25.05■■□□□ 1.6
TRA2A-201ENST00000297071 GOLGA2Q08379 1002 aa25.04■■□□□ 1.6
TRA2A-201ENST00000297071 SLC24A1O60721 1099 aa25.03■■□□□ 1.6
TRA2A-201ENST00000297071 AMER1Q5JTC6 1135 aaPredicted RBP25.03■■□□□ 1.6
TRA2A-201ENST00000297071 FBLN2P98095 1184 aa25.02■■□□□ 1.6
TRA2A-201ENST00000297071 WDR43Q15061 677 aaKnown RBP eCLIP25.02■■□□□ 1.6
TRA2A-201ENST00000297071 KNSTRNQ9Y448 316 aa25.02■■□□□ 1.6
TRA2A-201ENST00000297071 PTPRTO14522 1441 aa25.01■■□□□ 1.59
TRA2A-201ENST00000297071 ABCC1P33527 1531 aa25.01■■□□□ 1.59
TRA2A-201ENST00000297071 TET3O43151 1660 aa25■■□□□ 1.59
TRA2A-201ENST00000297071 SLFN5Q08AF3 891 aa25■■□□□ 1.59
TRA2A-201ENST00000297071 NINLQ9Y2I6 1382 aa25■■□□□ 1.59
TRA2A-201ENST00000297071 ARAP3Q8WWN8 1544 aa24.99■■□□□ 1.59
TRA2A-201ENST00000297071 NKTRP30414 1462 aaKnown RBP24.98■■□□□ 1.59
TRA2A-201ENST00000297071 C8orf34Q49A92 452 aa24.98■■□□□ 1.59
TRA2A-201ENST00000297071 C20orf194Q5TEA3 1177 aa24.97■■□□□ 1.59
TRA2A-201ENST00000297071 RTEL1-TNFRSF6BF6WH68 1400 aa24.97■■□□□ 1.59
TRA2A-201ENST00000297071 PLCH2O75038 1416 aa24.97■■□□□ 1.59
TRA2A-201ENST00000297071 GSE1Q14687 1217 aa24.96■■□□□ 1.59
TRA2A-201ENST00000297071 CLTCL1P53675 1640 aa24.95■■□□□ 1.58
TRA2A-201ENST00000297071 NFKBIBQ15653 356 aa24.95■■□□□ 1.58
TRA2A-201ENST00000297071 CHD1O14646 1710 aa24.94■■□□□ 1.58
TRA2A-201ENST00000297071 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
TRA2A-201ENST00000297071 DAXXQ9UER7 740 aaPredicted RBP24.93■■□□□ 1.58
TRA2A-201ENST00000297071 VWDEQ8N2E2 1590 aa24.92■■□□□ 1.58
TRA2A-201ENST00000297071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.91■■□□□ 1.586e-8■■□□□ 13.6
TRA2A-201ENST00000297071 ZMYM3Q14202 1370 aa24.91■■□□□ 1.58
TRA2A-201ENST00000297071 IFT172Q9UG01 1749 aa24.9■■□□□ 1.58
TRA2A-201ENST00000297071 MYOM2P54296 1465 aa24.89■■□□□ 1.57
TRA2A-201ENST00000297071 AAMPQ13685 434 aa24.89■■□□□ 1.57
TRA2A-201ENST00000297071 E9PSI1 815 aa24.88■■□□□ 1.57
TRA2A-201ENST00000297071 IL27Q8NEV9 243 aa24.88■■□□□ 1.57
TRA2A-201ENST00000297071 MAP3K4Q9Y6R4 1608 aa24.88■■□□□ 1.57
TRA2A-201ENST00000297071 PDE3AQ14432 1141 aa24.86■■□□□ 1.57
TRA2A-201ENST00000297071 UHRF1BP1LA0JNW5 1464 aa24.86■■□□□ 1.57
TRA2A-201ENST00000297071 CGNL1Q0VF96 1302 aa24.85■■□□□ 1.57
TRA2A-201ENST00000297071 ZCCHC11Q5TAX3 1644 aaKnown RBP24.85■■□□□ 1.57
TRA2A-201ENST00000297071 KIF1BO60333 1816 aa24.85■■□□□ 1.57
TRA2A-201ENST00000297071 ZFYVE16Q7Z3T8 1539 aa24.85■■□□□ 1.57
TRA2A-201ENST00000297071 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
TRA2A-201ENST00000297071 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
TRA2A-201ENST00000297071 MAPK8IP3Q9UPT6 1336 aa24.82■■□□□ 1.56
TRA2A-201ENST00000297071 POLR3AO14802 1390 aaPredicted RBP24.81■■□□□ 1.56
TRA2A-201ENST00000297071 ABCA6Q8N139 1617 aa24.81■■□□□ 1.56
TRA2A-201ENST00000297071 SKAP1Q86WV1 359 aa24.81■■□□□ 1.56
TRA2A-201ENST00000297071 USP32Q8NFA0 1604 aa24.8■■□□□ 1.56
TRA2A-201ENST00000297071 ERVK-7P63135 1459 aa24.8■■□□□ 1.56
TRA2A-201ENST00000297071 INO80Q9ULG1 1556 aaPredicted RBP24.79■■□□□ 1.56
TRA2A-201ENST00000297071 SHPRHQ149N8 1683 aa24.79■■□□□ 1.56
TRA2A-201ENST00000297071 NCBP3Q53F19 620 aaKnown RBP24.77■■□□□ 1.56
TRA2A-201ENST00000297071 SETBP1Q9Y6X0 1596 aa24.77■■□□□ 1.56
TRA2A-201ENST00000297071 TRAPPC8Q9Y2L5 1435 aa24.77■■□□□ 1.56
TRA2A-201ENST00000297071 ZC3H13Q5T200 1668 aaKnown RBP24.76■■□□□ 1.55
TRA2A-201ENST00000297071 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
TRA2A-201ENST00000297071 FRAT1Q92837 279 aaPredicted RBP24.73■■□□□ 1.55
TRA2A-201ENST00000297071 APAF1O14727 1248 aa24.72■■□□□ 1.55
TRA2A-201ENST00000297071 KANK1Q14678 1352 aa24.72■■□□□ 1.55
TRA2A-201ENST00000297071 USP19O94966 1318 aa24.71■■□□□ 1.55
TRA2A-201ENST00000297071 ABCA9Q8IUA7 1624 aa24.69■■□□□ 1.54
TRA2A-201ENST00000297071 SPAG9O60271 1321 aaKnown RBP24.69■■□□□ 1.54
TRA2A-201ENST00000297071 ATP7AQ04656 1500 aa24.69■■□□□ 1.54
TRA2A-201ENST00000297071 SPINK5Q9NQ38 1064 aaPredicted RBP24.69■■□□□ 1.54
TRA2A-201ENST00000297071 MROH1Q8NDA8 1641 aa24.69■■□□□ 1.54
TRA2A-201ENST00000297071 IQSEC2Q5JU85 1478 aa24.69■■□□□ 1.54
TRA2A-201ENST00000297071 NLRP1Q9C000 1473 aa24.69■■□□□ 1.54
TRA2A-201ENST00000297071 SLC4A3P48751 1232 aa24.68■■□□□ 1.54
TRA2A-201ENST00000297071 BECN1Q14457 450 aa24.68■■□□□ 1.54
TRA2A-201ENST00000297071 CLUAP1Q96AJ1 413 aa24.68■■□□□ 1.54
TRA2A-201ENST00000297071 CENPJQ9HC77 1338 aaPredicted RBP24.68■■□□□ 1.54
TRA2A-201ENST00000297071 RGS3P49796 1198 aa24.68■■□□□ 1.54
TRA2A-201ENST00000297071 BCAR3O75815 825 aa24.66■■□□□ 1.54
TRA2A-201ENST00000297071 PMFBP1Q8TBY8 1022 aa24.66■■□□□ 1.54
TRA2A-201ENST00000297071 LMTK2Q8IWU2 1503 aa24.65■■□□□ 1.54
TRA2A-201ENST00000297071 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
TRA2A-201ENST00000297071 EFCAB6Q5THR3 1501 aa24.65■■□□□ 1.54
TRA2A-201ENST00000297071 ANO8Q9HCE9 1232 aaPredicted RBP24.65■■□□□ 1.54
TRA2A-201ENST00000297071 IGHDP01880 384 aa24.64■■□□□ 1.54
TRA2A-201ENST00000297071 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms