RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 SMG1Q96Q15 3661 aaKnown RBP5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 NECTIN2Q92692 538 aa5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 CCDC47Q96A33 483 aaKnown RBP5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 NGLY1Q96IV0 654 aa5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 ZFHX4Q86UP3 3567 aa5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 CALD1Q05682 793 aaKnown RBP5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 NFXL1Q6ZNB6 911 aa5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 MIER1Q8N108 512 aa5.29□□□□□ -1.56
RAPGEF6-201ENST00000296859 HNRNPMP52272 730 aaKnown RBP eCLIP5.28□□□□□ -1.562e-6■■■■□ 22.8
RAPGEF6-201ENST00000296859 SLKQ9H2G2 1235 aaPredicted RBP5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 TMOD2Q9NZR1 351 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 ERICH2A1L162 156 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 MATR3P43243 847 aaKnown RBP eCLIP5.28□□□□□ -1.561e-6■■■□□ 19.2
RAPGEF6-201ENST00000296859 UQCRHLA0A096LP55 91 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 E9PSI1 815 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 SART3Q15020 963 aaKnown RBP5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 TERF2IPQ9NYB0 399 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 EFCAB2Q5VUJ9 269 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 ITPRIPQ8IWB1 547 aa5.28□□□□□ -1.56
RAPGEF6-201ENST00000296859 DDX54Q8TDD1 881 aaKnown RBP5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 GTF3C3Q9Y5Q9 886 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 RRP12Q5JTH9 1297 aaKnown RBP5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 C9orf78Q9NZ63 289 aaPredicted RBP5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 B4GALNT3Q6L9W6 998 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 HSCBQ8IWL3 235 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 TRIM29Q14134 588 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 HSP90AB2PQ58FF8 381 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 GOLGA6L1Q8N7Z2 621 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 PSMD1Q99460 953 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 UBAP1LF5GYI3 381 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 IPO8O15397 1037 aaKnown RBP5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 KDM4AO75164 1064 aa5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 AIMP1Q12904 312 aaKnown RBP5.27□□□□□ -1.57
RAPGEF6-201ENST00000296859 MCTP1Q6DN14 999 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 CPLX2Q6PUV4 134 aaKnown RBP5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 BBXQ8WY36 941 aaPredicted RBP5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 COL6A3P12111 3177 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 CCNB3Q8WWL7 1395 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 SCRIBQ14160 1630 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 ESCO1Q5FWF5 840 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 TOM1L2Q6ZVM7 507 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 PDCL3Q9H2J4 239 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 H3BQV1 296 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 EPS15P42566 896 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 LRRFIP1Q32MZ4 808 aaKnown RBP5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 IFFO2Q5TF58 517 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 HMMRO75330 724 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 TRDNQ13061 729 aa5.26□□□□□ -1.57
RAPGEF6-201ENST00000296859 ZCCHC6Q5VYS8 1495 aaKnown RBP5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 RSF1Q96T23 1441 aaPredicted RBP5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 HSP90AB4PQ58FF6 505 aa5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 FAM184AQ8NB25 1140 aa5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 NEUROD6Q96NK8 337 aa5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 ELL2O00472 640 aaPredicted RBP5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 NAP1L1P55209 391 aaKnown RBP5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 COG3Q96JB2 828 aa5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 KIF3AQ9Y496 699 aa5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 CPLX1O14810 134 aa5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 CCAR2Q8N163 923 aaKnown RBP5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 CIZ1Q9ULV3 898 aaPredicted RBP5.25□□□□□ -1.57
RAPGEF6-201ENST00000296859 OFD1O75665 1012 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 BIRC2Q13490 618 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 KIF6Q6ZMV9 814 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 CHMP4CQ96CF2 233 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 RRP7AQ9Y3A4 280 aaKnown RBP5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 KRT18P05783 430 aaKnown RBP5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 POLD1P28340 1107 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 ZNF408Q9H9D4 720 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 UNC13AQ9UPW8 1703 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 TRIM21P19474 475 aaKnown RBP5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 TNNT3P45378 269 aaPredicted RBP5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 WASHC4Q2M389 1173 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 NBPF8Q3BBV2 869 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 NBPF14Q5TI25 921 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 BCL2L13Q9BXK5 485 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 TRAK1Q9UPV9 953 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 KIF16BQ96L93 1317 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 STK11IPQ8N1F8 1099 aa5.24□□□□□ -1.57
RAPGEF6-201ENST00000296859 TPM1P09493 284 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 HOMER1Q86YM7 354 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 RILPL2Q969X0 211 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 DDX58O95786 925 aaKnown RBP5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 IPO7O95373 1038 aaKnown RBP5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 LRSAM1Q6UWE0 723 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 RIC3Q7Z5B4 369 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 PRDM11Q9NQV5 511 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 RDXP35241 583 aaKnown RBP5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 FOSBP53539 338 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 GPR162Q16538 588 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 NAP1L5Q96NT1 182 aaPredicted RBP5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 ZHX3Q9H4I2 956 aa5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 MINK1Q8N4C8 1332 aaPredicted RBP5.23□□□□□ -1.57
RAPGEF6-201ENST00000296859 FOXD4L5Q5VV16 416 aaPredicted RBP5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 FOXD4L4Q8WXT5 416 aaPredicted RBP5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 IPO9Q96P70 1041 aaKnown RBP5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 ARID3AQ99856 593 aa5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 SYCP1Q15431 976 aa5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 ZNF622Q969S3 477 aaKnown RBP eCLIP5.22□□□□□ -1.576e-7■■■□□ 14.8
RAPGEF6-201ENST00000296859 SUPT16HQ9Y5B9 1047 aaKnown RBP5.22□□□□□ -1.57
RAPGEF6-201ENST00000296859 CLIP1P30622 1438 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms