RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 REREQ9P2R6 1566 aa33.5■■■□□ 2.95
SHISA5-201ENST00000296444 CLTCQ00610 1675 aaKnown RBP33.47■■■□□ 2.95
SHISA5-201ENST00000296444 ZC3H13Q5T200 1668 aaKnown RBP33.46■■■□□ 2.95
SHISA5-201ENST00000296444 PIK3C2BO00750 1634 aa33.44■■■□□ 2.94
SHISA5-201ENST00000296444 DISP3Q9P2K9 1392 aa33.43■■■□□ 2.94
SHISA5-201ENST00000296444 PREX1Q8TCU6 1659 aa33.43■■■□□ 2.94
SHISA5-201ENST00000296444 IFT172Q9UG01 1749 aa33.43■■■□□ 2.94
SHISA5-201ENST00000296444 CCDC184Q52MB2 194 aa33.42■■■□□ 2.94
SHISA5-201ENST00000296444 POLR1AO95602 1720 aaPredicted RBP33.42■■■□□ 2.94
SHISA5-201ENST00000296444 NEURL4Q96JN8 1562 aa33.42■■■□□ 2.94
SHISA5-201ENST00000296444 TMEM132EQ6IEE7 984 aa33.41■■■□□ 2.94
SHISA5-201ENST00000296444 MYOM2P54296 1465 aa33.38■■■□□ 2.93
SHISA5-201ENST00000296444 MYO5BQ9ULV0 1848 aa33.38■■■□□ 2.93
SHISA5-201ENST00000296444 ERVK-7P63135 1459 aa33.37■■■□□ 2.93
SHISA5-201ENST00000296444 SLC52A1Q9NWF4 448 aa33.37■■■□□ 2.93
SHISA5-201ENST00000296444 STAC3Q96MF2 364 aa33.36■■■□□ 2.93
SHISA5-201ENST00000296444 NRXN1Q9ULB1 1477 aa33.36■■■□□ 2.93
SHISA5-201ENST00000296444 PPLO60437 1756 aa33.35■■■□□ 2.93
SHISA5-201ENST00000296444 LAMC1P11047 1609 aa33.35■■■□□ 2.93
SHISA5-201ENST00000296444 ZMYM3Q14202 1370 aa33.34■■■□□ 2.93
SHISA5-201ENST00000296444 CEBPAP49715 358 aaPredicted RBP33.32■■■□□ 2.92
SHISA5-201ENST00000296444 PRKRIP1Q9H875 184 aaPredicted RBP33.32■■■□□ 2.92
SHISA5-201ENST00000296444 PPP6R1Q9UPN7 881 aa33.32■■■□□ 2.92
SHISA5-201ENST00000296444 PLPPR3Q6T4P5 718 aa33.31■■■□□ 2.92
SHISA5-201ENST00000296444 PIK3C2GO75747 1445 aa33.3■■■□□ 2.92
SHISA5-201ENST00000296444 NEXMIFQ5QGS0 1516 aa33.29■■■□□ 2.92
SHISA5-201ENST00000296444 C14orf93Q9H972 538 aaKnown RBP33.29■■■□□ 2.92
SHISA5-201ENST00000296444 IQGAP1P46940 1657 aa33.29■■■□□ 2.92
SHISA5-201ENST00000296444 SCAF11Q99590 1463 aaKnown RBP33.29■■■□□ 2.92
SHISA5-201ENST00000296444 TMEM131LA2VDJ0 1609 aa33.28■■■□□ 2.92
SHISA5-201ENST00000296444 TRAK1Q9UPV9 953 aa33.27■■■□□ 2.92
SHISA5-201ENST00000296444 ESF1Q9H501 851 aaKnown RBP33.27■■■□□ 2.92
SHISA5-201ENST00000296444 RPGRIP1LQ68CZ1 1315 aa33.26■■■□□ 2.91
SHISA5-201ENST00000296444 CCER2I3L3R5 266 aa33.26■■■□□ 2.91
SHISA5-201ENST00000296444 STAG3Q9UJ98 1225 aa33.23■■■□□ 2.91
SHISA5-201ENST00000296444 VGFO15240 615 aaPredicted RBP33.21■■■□□ 2.91
SHISA5-201ENST00000296444 TMF1P82094 1093 aa33.2■■■□□ 2.91
SHISA5-201ENST00000296444 KIAA1210Q9ULL0 1709 aa33.2■■■□□ 2.9
SHISA5-201ENST00000296444 SPATA31D1Q6ZQQ2 1576 aa33.19■■■□□ 2.9
SHISA5-201ENST00000296444 ADGRB1O14514 1584 aa33.17■■■□□ 2.9
SHISA5-201ENST00000296444 PANK3Q9H999 370 aa33.14■■■□□ 2.9
SHISA5-201ENST00000296444 A2ML1A8K2U0 1454 aa33.14■■■□□ 2.9
SHISA5-201ENST00000296444 PER1O15534 1290 aaPredicted RBP33.13■■■□□ 2.89
SHISA5-201ENST00000296444 STK26Q9P289 416 aa33.13■■■□□ 2.89
SHISA5-201ENST00000296444 SAFB2Q14151 953 aaKnown RBP eCLIP33.1■■■□□ 2.89
SHISA5-201ENST00000296444 ASXL1Q8IXJ9 1541 aa33.05■■■□□ 2.88
SHISA5-201ENST00000296444 TNRQ92752 1358 aa33.04■■■□□ 2.88
SHISA5-201ENST00000296444 SETBP1Q9Y6X0 1596 aa33.04■■■□□ 2.88
SHISA5-201ENST00000296444 CENPJQ9HC77 1338 aaPredicted RBP33.04■■■□□ 2.88
SHISA5-201ENST00000296444 EIF3AQ14152 1382 aaKnown RBP33.03■■■□□ 2.88
SHISA5-201ENST00000296444 ZFYVE9O95405 1425 aa33.03■■■□□ 2.88
SHISA5-201ENST00000296444 MRS2Q9HD23 443 aa33.03■■■□□ 2.88
SHISA5-201ENST00000296444 RIMS2Q9UQ26 1411 aa33.01■■■□□ 2.88
SHISA5-201ENST00000296444 CC2D1BQ5T0F9 858 aaKnown RBP33.01■■■□□ 2.87
SHISA5-201ENST00000296444 FAM9BQ8IZU0 186 aa33■■■□□ 2.87
SHISA5-201ENST00000296444 SENP3-EIF4A1A0A087X0R7 540 aa32.96■■■□□ 2.87
SHISA5-201ENST00000296444 PTPRMP28827 1452 aa32.94■■■□□ 2.86
SHISA5-201ENST00000296444 ALKQ9UM73 1620 aa32.93■■■□□ 2.86
SHISA5-201ENST00000296444 LTKP29376 864 aa32.91■■■□□ 2.86
SHISA5-201ENST00000296444 C3P01024 1663 aa32.91■■■□□ 2.86
SHISA5-201ENST00000296444 MYO3AQ8NEV4 1616 aa32.89■■■□□ 2.86
SHISA5-201ENST00000296444 PRAM1Q96QH2 718 aa32.89■■■□□ 2.86
SHISA5-201ENST00000296444 MYOM1P52179 1685 aa32.88■■■□□ 2.85
SHISA5-201ENST00000296444 CARD14Q9BXL6 1004 aa32.88■■■□□ 2.85
SHISA5-201ENST00000296444 SLC12A5Q9H2X9 1139 aa32.88■■■□□ 2.85
SHISA5-201ENST00000296444 QRICH2Q9H0J4 1663 aa32.88■■■□□ 2.85
SHISA5-201ENST00000296444 ARHGEF28Q8N1W1 1705 aaKnown RBP32.87■■■□□ 2.85
SHISA5-201ENST00000296444 FER1L4A9Z1Z3 1794 aa32.87■■■□□ 2.85
SHISA5-201ENST00000296444 WAPLQ7Z5K2 1190 aa32.87■■■□□ 2.85
SHISA5-201ENST00000296444 YTHDC2Q9H6S0 1430 aaKnown RBP32.86■■■□□ 2.85
SHISA5-201ENST00000296444 METP08581 1390 aa32.85■■■□□ 2.85
SHISA5-201ENST00000296444 HNRNPUQ00839 825 aaKnown RBP eCLIP32.85■■■□□ 2.85
SHISA5-201ENST00000296444 CABP2Q9NPB3 220 aa32.85■■■□□ 2.85
SHISA5-201ENST00000296444 CDCA8Q53HL2 280 aa32.84■■■□□ 2.85
SHISA5-201ENST00000296444 MINK1Q8N4C8 1332 aaPredicted RBP32.84■■■□□ 2.85
SHISA5-201ENST00000296444 UBR1Q8IWV7 1749 aa32.83■■■□□ 2.85
SHISA5-201ENST00000296444 TMEM2Q9UHN6 1383 aa32.83■■■□□ 2.85
SHISA5-201ENST00000296444 SBNO2Q9Y2G9 1366 aa32.83■■■□□ 2.85
SHISA5-201ENST00000296444 AMER1Q5JTC6 1135 aaPredicted RBP32.82■■■□□ 2.84
SHISA5-201ENST00000296444 TMC1Q8TDI8 760 aa32.82■■■□□ 2.84
SHISA5-201ENST00000296444 PARD3Q8TEW0 1356 aa32.81■■■□□ 2.84
SHISA5-201ENST00000296444 BCANQ96GW7 911 aa32.81■■■□□ 2.84
SHISA5-201ENST00000296444 NRXN3Q9Y4C0 1643 aa32.81■■■□□ 2.84
SHISA5-201ENST00000296444 KDM5AP29375 1690 aaKnown RBP32.81■■■□□ 2.84
SHISA5-201ENST00000296444 PLEKHH1Q9ULM0 1364 aa32.81■■■□□ 2.84
SHISA5-201ENST00000296444 KTN1Q86UP2 1357 aaKnown RBP32.8■■■□□ 2.84
SHISA5-201ENST00000296444 TULP4Q9NRJ4 1543 aa32.79■■■□□ 2.84
SHISA5-201ENST00000296444 KNSTRNQ9Y448 316 aa32.78■■■□□ 2.84
SHISA5-201ENST00000296444 RALBP1Q15311 655 aa32.77■■■□□ 2.84
SHISA5-201ENST00000296444 POGKQ9P215 609 aa32.77■■■□□ 2.84
SHISA5-201ENST00000296444 MYBBP1AQ9BQG0 1328 aaKnown RBP32.77■■■□□ 2.84
SHISA5-201ENST00000296444 SETD1AO15047 1707 aaKnown RBP32.76■■■□□ 2.83
SHISA5-201ENST00000296444 TXNDC2Q86VQ3 553 aa32.75■■■□□ 2.83
SHISA5-201ENST00000296444 PNISRQ8TF01 805 aaKnown RBP32.75■■■□□ 2.83
SHISA5-201ENST00000296444 SLC26A8Q96RN1 970 aa32.74■■■□□ 2.83
SHISA5-201ENST00000296444 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.74■■■□□ 2.83
SHISA5-201ENST00000296444 SUPT16HQ9Y5B9 1047 aaKnown RBP32.72■■■□□ 2.83
SHISA5-201ENST00000296444 NLRP1Q9C000 1473 aa32.69■■■□□ 2.82
SHISA5-201ENST00000296444 RIMS1Q86UR5 1692 aaKnown RBP32.69■■■□□ 2.82
SHISA5-201ENST00000296444 EVC2Q86UK5 1308 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms