RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
RTP3-201ENST00000296142 ANKRD30AQ9BXX3 1397 aa13.05□□□□□ -0.32
RTP3-201ENST00000296142 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
RTP3-201ENST00000296142 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
RTP3-201ENST00000296142 SLAIN2Q9P270 581 aa13.04□□□□□ -0.32
RTP3-201ENST00000296142 NOS1P29475 1434 aa13.04□□□□□ -0.32
RTP3-201ENST00000296142 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
RTP3-201ENST00000296142 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
RTP3-201ENST00000296142 MSH6P52701 1360 aa13.03□□□□□ -0.32
RTP3-201ENST00000296142 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
RTP3-201ENST00000296142 NWD1Q149M9 1564 aa13.02□□□□□ -0.32
RTP3-201ENST00000296142 TMEM131LA2VDJ0 1609 aa13□□□□□ -0.33
RTP3-201ENST00000296142 NKTRP30414 1462 aaKnown RBP13□□□□□ -0.33
RTP3-201ENST00000296142 RIMS2Q9UQ26 1411 aa13□□□□□ -0.33
RTP3-201ENST00000296142 TRIM52Q96A61 297 aa13□□□□□ -0.33
RTP3-201ENST00000296142 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
RTP3-201ENST00000296142 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
RTP3-201ENST00000296142 LRP6O75581 1613 aa12.99□□□□□ -0.33
RTP3-201ENST00000296142 ZFYVE9O95405 1425 aa12.98□□□□□ -0.33
RTP3-201ENST00000296142 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
RTP3-201ENST00000296142 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
RTP3-201ENST00000296142 JCADQ9P266 1359 aa12.97□□□□□ -0.33
RTP3-201ENST00000296142 E9PCH4 1651 aa12.97□□□□□ -0.33
RTP3-201ENST00000296142 NUTM2BA6NNL0 878 aaPredicted RBP12.97□□□□□ -0.33
RTP3-201ENST00000296142 NUTM2EB1AL46 878 aaPredicted RBP12.97□□□□□ -0.33
RTP3-201ENST00000296142 NUTM2AQ8IVF1 878 aaPredicted RBP12.97□□□□□ -0.33
RTP3-201ENST00000296142 ANKRD50Q9ULJ7 1429 aa12.97□□□□□ -0.33
RTP3-201ENST00000296142 PLEKHG1Q9ULL1 1385 aa12.96□□□□□ -0.33
RTP3-201ENST00000296142 ADGRL2O95490 1459 aa12.95□□□□□ -0.34
RTP3-201ENST00000296142 ITGAEP38570 1179 aa12.94□□□□□ -0.34
RTP3-201ENST00000296142 PPARGC1BQ86YN6 1023 aaKnown RBP12.93□□□□□ -0.34
RTP3-201ENST00000296142 ADAMTS13Q76LX8 1427 aa12.93□□□□□ -0.34
RTP3-201ENST00000296142 ATF3P18847 181 aa12.92□□□□□ -0.34
RTP3-201ENST00000296142 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
RTP3-201ENST00000296142 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
RTP3-201ENST00000296142 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
RTP3-201ENST00000296142 PTPRUQ92729 1446 aa12.91□□□□□ -0.34
RTP3-201ENST00000296142 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
RTP3-201ENST00000296142 UNC13BO14795 1591 aa12.91□□□□□ -0.34
RTP3-201ENST00000296142 SHPRHQ149N8 1683 aa12.91□□□□□ -0.34
RTP3-201ENST00000296142 HDGFP51858 240 aaKnown RBP12.9□□□□□ -0.34
RTP3-201ENST00000296142 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
RTP3-201ENST00000296142 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
RTP3-201ENST00000296142 C19orf44Q9H6X5 657 aa12.89□□□□□ -0.35
RTP3-201ENST00000296142 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
RTP3-201ENST00000296142 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTP3-201ENST00000296142 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
RTP3-201ENST00000296142 SPATA31A6Q5VVP1 1343 aa12.88□□□□□ -0.35
RTP3-201ENST00000296142 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
RTP3-201ENST00000296142 IQGAP3Q86VI3 1631 aa12.87□□□□□ -0.35
RTP3-201ENST00000296142 DIP2AQ14689 1571 aa12.87□□□□□ -0.35
RTP3-201ENST00000296142 RXRBP28702 533 aa12.87□□□□□ -0.35
RTP3-201ENST00000296142 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
RTP3-201ENST00000296142 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
RTP3-201ENST00000296142 AFF2P51816 1311 aa12.86□□□□□ -0.35
RTP3-201ENST00000296142 NUP155O75694 1391 aa12.86□□□□□ -0.35
RTP3-201ENST00000296142 TRPM2O94759 1503 aa12.86□□□□□ -0.35
RTP3-201ENST00000296142 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
RTP3-201ENST00000296142 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
RTP3-201ENST00000296142 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
RTP3-201ENST00000296142 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
RTP3-201ENST00000296142 METP08581 1390 aa12.84□□□□□ -0.35
RTP3-201ENST00000296142 XRN1Q8IZH2 1706 aaKnown RBP12.84□□□□□ -0.35
RTP3-201ENST00000296142 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
RTP3-201ENST00000296142 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
RTP3-201ENST00000296142 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
RTP3-201ENST00000296142 ADAMTS2O95450 1211 aa12.83□□□□□ -0.36
RTP3-201ENST00000296142 MST1RQ04912 1400 aa12.82□□□□□ -0.36
RTP3-201ENST00000296142 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
RTP3-201ENST00000296142 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
RTP3-201ENST00000296142 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
RTP3-201ENST00000296142 CLTCL1P53675 1640 aa12.8□□□□□ -0.36
RTP3-201ENST00000296142 KIF1BO60333 1816 aa12.79□□□□□ -0.36
RTP3-201ENST00000296142 RGS12O14924 1447 aa12.79□□□□□ -0.36
RTP3-201ENST00000296142 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
RTP3-201ENST00000296142 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
RTP3-201ENST00000296142 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
RTP3-201ENST00000296142 NGLY1Q96IV0 654 aa12.77□□□□□ -0.37
RTP3-201ENST00000296142 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
RTP3-201ENST00000296142 ROCK1Q13464 1354 aa12.77□□□□□ -0.37
RTP3-201ENST00000296142 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.37
RTP3-201ENST00000296142 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
RTP3-201ENST00000296142 NEXMIFQ5QGS0 1516 aa12.75□□□□□ -0.37
RTP3-201ENST00000296142 DCCP43146 1447 aa12.75□□□□□ -0.37
RTP3-201ENST00000296142 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
RTP3-201ENST00000296142 RBM6P78332 1123 aaKnown RBP12.74□□□□□ -0.37
RTP3-201ENST00000296142 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
RTP3-201ENST00000296142 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
RTP3-201ENST00000296142 CDK12Q9NYV4 1490 aaPredicted RBP12.73□□□□□ -0.37
RTP3-201ENST00000296142 ROBO2Q9HCK4 1378 aa12.72□□□□□ -0.37
RTP3-201ENST00000296142 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
RTP3-201ENST00000296142 USP21Q9UK80 565 aa12.71□□□□□ -0.37
RTP3-201ENST00000296142 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
RTP3-201ENST00000296142 EP400Q96L91 3159 aa12.69□□□□□ -0.38
RTP3-201ENST00000296142 FOXD1Q16676 465 aa12.68□□□□□ -0.38
RTP3-201ENST00000296142 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
RTP3-201ENST00000296142 PPLO60437 1756 aa12.68□□□□□ -0.38
RTP3-201ENST00000296142 STK26Q9P289 416 aa12.67□□□□□ -0.38
RTP3-201ENST00000296142 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
RTP3-201ENST00000296142 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms