RNA–Protein interactions for RNA: ENST00000296140.3

CCR1-201, Transcript of C-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR1, Length 2,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1-201ENST00000296140 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
CCR1-201ENST00000296140 RGS3P49796 1198 aa12.62□□□□□ -0.39
CCR1-201ENST00000296140 DMRT2Q9Y5R5 561 aa12.62□□□□□ -0.39
CCR1-201ENST00000296140 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
CCR1-201ENST00000296140 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
CCR1-201ENST00000296140 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
CCR1-201ENST00000296140 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
CCR1-201ENST00000296140 ATP10AO60312 1499 aa12.61□□□□□ -0.39
CCR1-201ENST00000296140 BCAR3O75815 825 aa12.6□□□□□ -0.39
CCR1-201ENST00000296140 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
CCR1-201ENST00000296140 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
CCR1-201ENST00000296140 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
CCR1-201ENST00000296140 APAF1O14727 1248 aa12.6□□□□□ -0.39
CCR1-201ENST00000296140 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
CCR1-201ENST00000296140 CENPQQ7L2Z9 268 aaPredicted RBP12.6□□□□□ -0.39
CCR1-201ENST00000296140 SLFN5Q08AF3 891 aa12.59□□□□□ -0.39
CCR1-201ENST00000296140 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
CCR1-201ENST00000296140 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
CCR1-201ENST00000296140 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
CCR1-201ENST00000296140 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
CCR1-201ENST00000296140 IQGAP1P46940 1657 aa12.58□□□□□ -0.4
CCR1-201ENST00000296140 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
CCR1-201ENST00000296140 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
CCR1-201ENST00000296140 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
CCR1-201ENST00000296140 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
CCR1-201ENST00000296140 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
CCR1-201ENST00000296140 MYOM1P52179 1685 aa12.55□□□□□ -0.4
CCR1-201ENST00000296140 SYNMO15061 1565 aa12.54□□□□□ -0.4
CCR1-201ENST00000296140 IGHDP01880 384 aa12.54□□□□□ -0.4
CCR1-201ENST00000296140 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
CCR1-201ENST00000296140 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
CCR1-201ENST00000296140 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
CCR1-201ENST00000296140 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
CCR1-201ENST00000296140 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
CCR1-201ENST00000296140 PLCH2O75038 1416 aa12.53□□□□□ -0.4
CCR1-201ENST00000296140 ABCC2Q92887 1545 aa12.53□□□□□ -0.4
CCR1-201ENST00000296140 CHD1O14646 1710 aa12.53□□□□□ -0.4
CCR1-201ENST00000296140 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
CCR1-201ENST00000296140 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
CCR1-201ENST00000296140 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
CCR1-201ENST00000296140 UGGT1Q9NYU2 1555 aa12.52□□□□□ -0.41
CCR1-201ENST00000296140 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
CCR1-201ENST00000296140 FRAT2O75474 233 aaPredicted RBP12.52□□□□□ -0.41
CCR1-201ENST00000296140 GSE1Q14687 1217 aa12.52□□□□□ -0.41
CCR1-201ENST00000296140 SPHKAPQ2M3C7 1700 aa12.52□□□□□ -0.41
CCR1-201ENST00000296140 TRPM2O94759 1503 aa12.51□□□□□ -0.41
CCR1-201ENST00000296140 ABCC1P33527 1531 aa12.51□□□□□ -0.41
CCR1-201ENST00000296140 CLASP1Q7Z460 1538 aa12.51□□□□□ -0.41
CCR1-201ENST00000296140 NKTRP30414 1462 aaKnown RBP12.51□□□□□ -0.41
CCR1-201ENST00000296140 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
CCR1-201ENST00000296140 ADGRF5Q8IZF2 1346 aa12.51□□□□□ -0.41
CCR1-201ENST00000296140 SEC24BO95487 1268 aa12.5□□□□□ -0.41
CCR1-201ENST00000296140 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
CCR1-201ENST00000296140 TNNQ9UQP3 1299 aa12.5□□□□□ -0.41
CCR1-201ENST00000296140 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
CCR1-201ENST00000296140 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
CCR1-201ENST00000296140 COG6Q9Y2V7 657 aa12.5□□□□□ -0.41
CCR1-201ENST00000296140 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
CCR1-201ENST00000296140 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
CCR1-201ENST00000296140 USP19O94966 1318 aa12.49□□□□□ -0.41
CCR1-201ENST00000296140 ERVK-7P63135 1459 aa12.49□□□□□ -0.41
CCR1-201ENST00000296140 EIF3AQ14152 1382 aaKnown RBP12.49□□□□□ -0.41
CCR1-201ENST00000296140 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
CCR1-201ENST00000296140 PTPRTO14522 1441 aa12.49□□□□□ -0.41
CCR1-201ENST00000296140 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
CCR1-201ENST00000296140 E9PSI1 815 aa12.48□□□□□ -0.41
CCR1-201ENST00000296140 CEP152O94986 1710 aa12.48□□□□□ -0.41
CCR1-201ENST00000296140 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
CCR1-201ENST00000296140 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
CCR1-201ENST00000296140 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
CCR1-201ENST00000296140 KIF3BO15066 747 aa12.47□□□□□ -0.41
CCR1-201ENST00000296140 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
CCR1-201ENST00000296140 ZCCHC11Q5TAX3 1644 aaKnown RBP12.46□□□□□ -0.41
CCR1-201ENST00000296140 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
CCR1-201ENST00000296140 BCL2L13Q9BXK5 485 aa12.46□□□□□ -0.41
CCR1-201ENST00000296140 KDM5AP29375 1690 aaKnown RBP12.46□□□□□ -0.42
CCR1-201ENST00000296140 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
CCR1-201ENST00000296140 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
CCR1-201ENST00000296140 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
CCR1-201ENST00000296140 ABCA6Q8N139 1617 aa12.45□□□□□ -0.42
CCR1-201ENST00000296140 RLBP1P12271 317 aa12.44□□□□□ -0.42
CCR1-201ENST00000296140 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
CCR1-201ENST00000296140 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
CCR1-201ENST00000296140 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
CCR1-201ENST00000296140 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
CCR1-201ENST00000296140 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
CCR1-201ENST00000296140 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
CCR1-201ENST00000296140 DEPDC5O75140 1603 aa12.41□□□□□ -0.42
CCR1-201ENST00000296140 TET3O43151 1660 aa12.41□□□□□ -0.42
CCR1-201ENST00000296140 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
CCR1-201ENST00000296140 PDE3AQ14432 1141 aa12.41□□□□□ -0.42
CCR1-201ENST00000296140 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
CCR1-201ENST00000296140 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
CCR1-201ENST00000296140 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
CCR1-201ENST00000296140 RTEL1-TNFRSF6BF6WH68 1400 aa12.4□□□□□ -0.42
CCR1-201ENST00000296140 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
CCR1-201ENST00000296140 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
CCR1-201ENST00000296140 POLR3AO14802 1390 aaPredicted RBP12.4□□□□□ -0.43
CCR1-201ENST00000296140 TMEM132EQ6IEE7 984 aa12.39□□□□□ -0.43
CCR1-201ENST00000296140 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms