RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GOLGA6L6A8MZA4 724 aa22.09■■□□□ 1.13
CDC42EP3-201ENST00000295324 DDX58O95786 925 aaKnown RBP22.09■■□□□ 1.13
CDC42EP3-201ENST00000295324 ZKSCAN2Q63HK3 967 aa22.09■■□□□ 1.13
CDC42EP3-201ENST00000295324 TCERG1O14776 1098 aaKnown RBP22.07■■□□□ 1.12
CDC42EP3-201ENST00000295324 NUTM2GQ5VZR2 741 aa22.07■■□□□ 1.12
CDC42EP3-201ENST00000295324 ABTB2Q8N961 1025 aa22.07■■□□□ 1.12
CDC42EP3-201ENST00000295324 NRDCO43847 1150 aa22.07■■□□□ 1.12
CDC42EP3-201ENST00000295324 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
CDC42EP3-201ENST00000295324 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
CDC42EP3-201ENST00000295324 IQGAP2Q13576 1575 aa22.05■■□□□ 1.12
CDC42EP3-201ENST00000295324 C9orf78Q9NZ63 289 aaPredicted RBP22.05■■□□□ 1.12
CDC42EP3-201ENST00000295324 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
CDC42EP3-201ENST00000295324 NOP58Q9Y2X3 529 aaKnown RBP22.04■■□□□ 1.12
CDC42EP3-201ENST00000295324 RPGRIP1LQ68CZ1 1315 aa22.04■■□□□ 1.12
CDC42EP3-201ENST00000295324 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
CDC42EP3-201ENST00000295324 CLSTN1O94985 981 aa22.03■■□□□ 1.12
CDC42EP3-201ENST00000295324 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
CDC42EP3-201ENST00000295324 GNAI1P63096 354 aa22.02■■□□□ 1.12
CDC42EP3-201ENST00000295324 API5Q9BZZ5 524 aaKnown RBP22.02■■□□□ 1.12
CDC42EP3-201ENST00000295324 KIAA1107Q9UPP5 1409 aa22.02■■□□□ 1.12
CDC42EP3-201ENST00000295324 KIF7Q2M1P5 1343 aa22.02■■□□□ 1.11
CDC42EP3-201ENST00000295324 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
CDC42EP3-201ENST00000295324 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
CDC42EP3-201ENST00000295324 HTATSF1O43719 755 aaKnown RBP22.01■■□□□ 1.11
CDC42EP3-201ENST00000295324 EPRSP07814 1512 aaKnown RBP22■■□□□ 1.11
CDC42EP3-201ENST00000295324 TOMM22Q9NS69 142 aa22■■□□□ 1.11
CDC42EP3-201ENST00000295324 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
CDC42EP3-201ENST00000295324 HMOX1P09601 288 aa21.99■■□□□ 1.11
CDC42EP3-201ENST00000295324 ZNF692Q9BU19 519 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP3-201ENST00000295324 LRRFIP1Q32MZ4 808 aaKnown RBP21.98■■□□□ 1.11
CDC42EP3-201ENST00000295324 SLC26A8Q96RN1 970 aa21.98■■□□□ 1.11
CDC42EP3-201ENST00000295324 SPRYD3Q8NCJ5 442 aa21.98■■□□□ 1.11
CDC42EP3-201ENST00000295324 HSP90B1P14625 803 aaKnown RBP21.97■■□□□ 1.11
CDC42EP3-201ENST00000295324 MFAP1P55081 439 aaKnown RBP21.97■■□□□ 1.11
CDC42EP3-201ENST00000295324 FKBP5Q13451 457 aaPredicted RBP21.97■■□□□ 1.11
CDC42EP3-201ENST00000295324 DNTTIP2Q5QJE6 756 aaKnown RBP21.97■■□□□ 1.11
CDC42EP3-201ENST00000295324 DAPK1P53355 1430 aa21.96■■□□□ 1.11
CDC42EP3-201ENST00000295324 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
CDC42EP3-201ENST00000295324 NECTIN2Q92692 538 aa21.95■■□□□ 1.11
CDC42EP3-201ENST00000295324 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
CDC42EP3-201ENST00000295324 CUL7Q14999 1698 aa21.94■■□□□ 1.1
CDC42EP3-201ENST00000295324 CDK13Q14004 1512 aaKnown RBP21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 GAS2L2Q8NHY3 880 aa21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 MTHFSP49914 203 aa21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 DDX19BQ9UMR2 479 aa21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 NOL10Q9BSC4 688 aaKnown RBP21.93■■□□□ 1.1
CDC42EP3-201ENST00000295324 ROCK1Q13464 1354 aa21.92■■□□□ 1.1
CDC42EP3-201ENST00000295324 CCDC34Q96HJ3 373 aa21.92■■□□□ 1.1
CDC42EP3-201ENST00000295324 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 NAP1L5Q96NT1 182 aaPredicted RBP21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 GBP4Q96PP9 640 aa21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 ARHGEF11O15085 1522 aa21.91■■□□□ 1.1
CDC42EP3-201ENST00000295324 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
CDC42EP3-201ENST00000295324 KIF3AQ9Y496 699 aa21.9■■□□□ 1.1
CDC42EP3-201ENST00000295324 ERBINQ96RT1 1412 aa21.9■■□□□ 1.1
CDC42EP3-201ENST00000295324 SMG6Q86US8 1419 aaKnown RBP21.9■■□□□ 1.1
CDC42EP3-201ENST00000295324 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
CDC42EP3-201ENST00000295324 STRN4Q9NRL3 753 aa21.89■■□□□ 1.1
CDC42EP3-201ENST00000295324 RTEL1-TNFRSF6BF6WH68 1400 aa21.89■■□□□ 1.09
CDC42EP3-201ENST00000295324 KIF16BQ96L93 1317 aa21.89■■□□□ 1.09
CDC42EP3-201ENST00000295324 RILPL2Q969X0 211 aa21.89■■□□□ 1.09
CDC42EP3-201ENST00000295324 COG6Q9Y2V7 657 aa21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 DZIP1LQ8IYY4 767 aaKnown RBP21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 CABP1Q9NZU7 370 aa21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 ADGRL1O94910 1474 aa21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 VPS37DQ86XT2 251 aa21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 PTMSP20962 102 aa21.88■■□□□ 1.09
CDC42EP3-201ENST00000295324 AMOTL1Q8IY63 956 aa21.87■■□□□ 1.09
CDC42EP3-201ENST00000295324 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
CDC42EP3-201ENST00000295324 CENPQQ7L2Z9 268 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP3-201ENST00000295324 CHMP4CQ96CF2 233 aa21.87■■□□□ 1.09
CDC42EP3-201ENST00000295324 G3BP1Q13283 466 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDC42EP3-201ENST00000295324 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
CDC42EP3-201ENST00000295324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDC42EP3-201ENST00000295324 SLC12A5Q9H2X9 1139 aa21.85■■□□□ 1.09
CDC42EP3-201ENST00000295324 IFIT2P09913 472 aaKnown RBP21.85■■□□□ 1.09
CDC42EP3-201ENST00000295324 RRP1P56182 461 aaKnown RBP21.85■■□□□ 1.09
CDC42EP3-201ENST00000295324 WASHC2AQ641Q2 1341 aa21.85■■□□□ 1.09
CDC42EP3-201ENST00000295324 CNTLNQ9NXG0 1405 aa21.85■■□□□ 1.09
CDC42EP3-201ENST00000295324 ST18O60284 1047 aa21.85■■□□□ 1.09
CDC42EP3-201ENST00000295324 PEG3Q9GZU2 1588 aa21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 NUTM2BA6NNL0 878 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 NUTM2EB1AL46 878 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 NUTM2AQ8IVF1 878 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 DIAPH3Q9NSV4 1193 aa21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 HSP90AB4PQ58FF6 505 aa21.84■■□□□ 1.09
CDC42EP3-201ENST00000295324 PLIN1O60240 522 aa21.83■■□□□ 1.09
CDC42EP3-201ENST00000295324 RUFY2Q8WXA3 655 aa21.83■■□□□ 1.09
CDC42EP3-201ENST00000295324 RTN4Q9NQC3 1192 aaKnown RBP21.83■■□□□ 1.09
CDC42EP3-201ENST00000295324 TRIM34Q9BYJ4 488 aa21.83■■□□□ 1.09
CDC42EP3-201ENST00000295324 PRDM11Q9NQV5 511 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms