RNA–Protein interactions for RNA: ENST00000293826.4

TNFSF12-TNFSF13-201, Transcript of TNFSF12-TNFSF13 readthrough, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF12-TNFSF13, Length 1,816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13-201ENST00000293826 TRPM1Q7Z4N2 1603 aa33.9■■■■□ 3.02
TNFSF12-TNFSF13-201ENST00000293826 NLRP1Q9C000 1473 aa33.9■■■■□ 3.02
TNFSF12-TNFSF13-201ENST00000293826 RALGAPBQ86X10 1494 aa33.88■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 SENP3Q9H4L4 574 aaPredicted RBP33.88■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 RPGRIP1LQ68CZ1 1315 aa33.88■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 KDM4FA0A1W2PPD8 638 aa33.88■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 NBPF1Q3BBV0 1214 aa33.86■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 HIRIP3Q9BW71 556 aaPredicted RBP33.86■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 DIEXFQ68CQ4 756 aaKnown RBP33.86■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 NRXN1Q9ULB1 1477 aa33.84■■■■□ 3.01
TNFSF12-TNFSF13-201ENST00000293826 STAC3Q96MF2 364 aa33.82■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 KDM5AP29375 1690 aaKnown RBP33.82■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 RIMS2Q9UQ26 1411 aa33.81■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 ROCK2O75116 1388 aaKnown RBP33.8■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 CFAP70Q5T0N1 1121 aa33.79■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 PIK3C2GO75747 1445 aa33.78■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 ZFYVE9O95405 1425 aa33.78■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 CEP170BQ9Y4F5 1589 aaPredicted RBP33.78■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 VGFO15240 615 aaPredicted RBP33.77■■■■□ 3
TNFSF12-TNFSF13-201ENST00000293826 CARD11Q9BXL7 1154 aa33.76■■■□□ 2.99
TNFSF12-TNFSF13-201ENST00000293826 TMEM2Q9UHN6 1383 aa33.75■■■□□ 2.99
TNFSF12-TNFSF13-201ENST00000293826 HSPA5P11021 654 aaKnown RBP33.74■■■□□ 2.99
TNFSF12-TNFSF13-201ENST00000293826 SETD1BQ9UPS6 1966 aaKnown RBP33.73■■■□□ 2.99
TNFSF12-TNFSF13-201ENST00000293826 ZNF142P52746 1687 aaPredicted RBP33.7■■■□□ 2.99
TNFSF12-TNFSF13-201ENST00000293826 KIAA1210Q9ULL0 1709 aa33.7■■■□□ 2.99
TNFSF12-TNFSF13-201ENST00000293826 GPRASP1Q5JY77 1395 aa33.69■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 EIF4G2P78344 907 aaKnown RBP eCLIP33.69■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 LTKP29376 864 aa33.67■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 USP47Q96K76 1375 aa33.67■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 C14orf93Q9H972 538 aaKnown RBP33.66■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 THEMISQ8N1K5 641 aaPredicted RBP33.65■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 SLIT1O75093 1534 aa33.64■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 ARHGAP23Q9P227 1491 aa33.64■■■□□ 2.98
TNFSF12-TNFSF13-201ENST00000293826 LAMC1P11047 1609 aa33.63■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 TMEM132EQ6IEE7 984 aa33.63■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.63■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 TXNDC2Q86VQ3 553 aa33.61■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 NRXN3Q9Y4C0 1643 aa33.6■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 ADGRB1O14514 1584 aa33.59■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 IQGAP1P46940 1657 aa33.59■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 ALKQ9UM73 1620 aa33.59■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 ASXL1Q8IXJ9 1541 aa33.57■■■□□ 2.97
TNFSF12-TNFSF13-201ENST00000293826 HDGFP51858 240 aaKnown RBP33.56■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 SETBP1Q9Y6X0 1596 aa33.56■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 ST20-MTHFSA0A0A6YYL1 179 aa33.55■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 EID1Q9Y6B2 187 aa33.54■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 SETD1AO15047 1707 aaKnown RBP33.53■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 BCANQ96GW7 911 aa33.52■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 SCAF11Q99590 1463 aaKnown RBP33.52■■■□□ 2.96
TNFSF12-TNFSF13-201ENST00000293826 PLEKHG1Q9ULL1 1385 aa33.5■■■□□ 2.95
TNFSF12-TNFSF13-201ENST00000293826 C11orf95C9JLR9 678 aaPredicted RBP33.49■■■□□ 2.95
TNFSF12-TNFSF13-201ENST00000293826 TRAK1Q9UPV9 953 aa33.48■■■□□ 2.95
TNFSF12-TNFSF13-201ENST00000293826 ADAMTS13Q76LX8 1427 aa33.47■■■□□ 2.95
TNFSF12-TNFSF13-201ENST00000293826 METP08581 1390 aa33.45■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 SLC26A8Q96RN1 970 aa33.44■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 STK26Q9P289 416 aa33.44■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 ANKLE2Q86XL3 938 aa33.42■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 HSPA2P54652 639 aa33.41■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 YTHDC2Q9H6S0 1430 aaKnown RBP33.39■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 TESK2Q96S53 571 aa33.39■■■□□ 2.94
TNFSF12-TNFSF13-201ENST00000293826 WASHC2AQ641Q2 1341 aa33.38■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 NCKAP5LQ9HCH0 1330 aa33.38■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 MED14O60244 1454 aa33.38■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 LMTK3Q96Q04 1460 aa33.38■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 ARHGEF28Q8N1W1 1705 aaKnown RBP33.37■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 POLR1AO95602 1720 aaPredicted RBP33.35■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 EIF3AQ14152 1382 aaKnown RBP33.34■■■□□ 2.93
TNFSF12-TNFSF13-201ENST00000293826 KIF7Q2M1P5 1343 aa33.32■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 LRPPRCP42704 1394 aaKnown RBP33.3■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 CCDC7Q96M83 1385 aa33.3■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 DISP3Q9P2K9 1392 aa33.3■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 PTPRUQ92729 1446 aa33.29■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 QRICH2Q9H0J4 1663 aa33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 CENPJQ9HC77 1338 aaPredicted RBP33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 SAFB2Q14151 953 aaKnown RBP eCLIP33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 MIER1Q8N108 512 aa33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 TBX22Q9Y458 520 aa33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 DDX10Q13206 875 aaKnown RBP33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 POLR3GLQ9BT43 218 aa33.28■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 NPHP4O75161 1426 aaPredicted RBP33.27■■■□□ 2.92
TNFSF12-TNFSF13-201ENST00000293826 DIP2AQ14689 1571 aa33.25■■■□□ 2.91
TNFSF12-TNFSF13-201ENST00000293826 PRAM1Q96QH2 718 aa33.25■■■□□ 2.91
TNFSF12-TNFSF13-201ENST00000293826 ABCC11Q96J66 1382 aa33.23■■■□□ 2.91
TNFSF12-TNFSF13-201ENST00000293826 WAPLQ7Z5K2 1190 aa33.23■■■□□ 2.91
TNFSF12-TNFSF13-201ENST00000293826 PLEKHH1Q9ULM0 1364 aa33.23■■■□□ 2.91
TNFSF12-TNFSF13-201ENST00000293826 KNDC1Q76NI1 1749 aa33.21■■■□□ 2.91
TNFSF12-TNFSF13-201ENST00000293826 DLC1Q96QB1 1528 aa33.19■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 TMF1P82094 1093 aa33.19■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 POGKQ9P215 609 aa33.18■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 ROBO2Q9HCK4 1378 aa33.17■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 AMOTL2Q9Y2J4 779 aa33.17■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 TECPR2O15040 1411 aa33.17■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 CPS1P31327 1500 aa33.17■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 STRCQ7RTU9 1775 aa33.16■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 SBNO2Q9Y2G9 1366 aa33.14■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 MINK1Q8N4C8 1332 aaPredicted RBP33.14■■■□□ 2.9
TNFSF12-TNFSF13-201ENST00000293826 XRN1Q8IZH2 1706 aaKnown RBP33.12■■■□□ 2.89
TNFSF12-TNFSF13-201ENST00000293826 TULP4Q9NRJ4 1543 aa33.11■■■□□ 2.89
TNFSF12-TNFSF13-201ENST00000293826 CHD2O14647 1828 aaKnown RBP33.11■■■□□ 2.89
TNFSF12-TNFSF13-201ENST00000293826 KCNA6P17658 529 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms