RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
CCDC116-201ENST00000292779 PER1O15534 1290 aaPredicted RBP20.33■□□□□ 0.85
CCDC116-201ENST00000292779 TET3O43151 1660 aa20.31■□□□□ 0.84
CCDC116-201ENST00000292779 TRPM2O94759 1503 aa20.3■□□□□ 0.84
CCDC116-201ENST00000292779 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
CCDC116-201ENST00000292779 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
CCDC116-201ENST00000292779 RNF123Q5XPI4 1314 aa20.3■□□□□ 0.84
CCDC116-201ENST00000292779 PTPRTO14522 1441 aa20.29■□□□□ 0.84
CCDC116-201ENST00000292779 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
CCDC116-201ENST00000292779 ANP32EQ9BTT0 268 aa20.28■□□□□ 0.84
CCDC116-201ENST00000292779 TMF1P82094 1093 aa20.28■□□□□ 0.84
CCDC116-201ENST00000292779 ARHGEF40Q8TER5 1519 aa20.27■□□□□ 0.84
CCDC116-201ENST00000292779 CLTCL1P53675 1640 aa20.26■□□□□ 0.83
CCDC116-201ENST00000292779 KANK1Q14678 1352 aa20.26■□□□□ 0.83
CCDC116-201ENST00000292779 PANK3Q9H999 370 aa20.26■□□□□ 0.83
CCDC116-201ENST00000292779 ABCC3O15438 1527 aa20.25■□□□□ 0.83
CCDC116-201ENST00000292779 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
CCDC116-201ENST00000292779 EFCAB6Q5THR3 1501 aa20.25■□□□□ 0.83
CCDC116-201ENST00000292779 IQGAP1P46940 1657 aa20.25■□□□□ 0.83
CCDC116-201ENST00000292779 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
CCDC116-201ENST00000292779 UGGT1Q9NYU2 1555 aa20.23■□□□□ 0.83
CCDC116-201ENST00000292779 LMTK2Q8IWU2 1503 aa20.22■□□□□ 0.83
CCDC116-201ENST00000292779 REREQ9P2R6 1566 aa20.22■□□□□ 0.83
CCDC116-201ENST00000292779 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
CCDC116-201ENST00000292779 MLECQ14165 292 aa20.2■□□□□ 0.82
CCDC116-201ENST00000292779 NPATQ14207 1427 aa20.2■□□□□ 0.82
CCDC116-201ENST00000292779 STAC3Q96MF2 364 aa20.19■□□□□ 0.82
CCDC116-201ENST00000292779 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
CCDC116-201ENST00000292779 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
CCDC116-201ENST00000292779 AGLP35573 1532 aa20.17■□□□□ 0.82
CCDC116-201ENST00000292779 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
CCDC116-201ENST00000292779 MSH5O43196 834 aa20.15■□□□□ 0.82
CCDC116-201ENST00000292779 CCDC136Q96JN2 1154 aa20.14■□□□□ 0.81
CCDC116-201ENST00000292779 CLTCQ00610 1675 aaKnown RBP20.14■□□□□ 0.81
CCDC116-201ENST00000292779 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
CCDC116-201ENST00000292779 KIAA1210Q9ULL0 1709 aa20.12■□□□□ 0.81
CCDC116-201ENST00000292779 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
CCDC116-201ENST00000292779 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
CCDC116-201ENST00000292779 INSRP06213 1382 aa20.11■□□□□ 0.81
CCDC116-201ENST00000292779 NEURL4Q96JN8 1562 aa20.11■□□□□ 0.81
CCDC116-201ENST00000292779 SYNMO15061 1565 aa20.1■□□□□ 0.81
CCDC116-201ENST00000292779 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
CCDC116-201ENST00000292779 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
CCDC116-201ENST00000292779 KIF1BO60333 1816 aa20.1■□□□□ 0.81
CCDC116-201ENST00000292779 FBXO31Q5XUX0 539 aaPredicted RBP20.1■□□□□ 0.81
CCDC116-201ENST00000292779 MROH2AA6NES4 1674 aa20.1■□□□□ 0.81
CCDC116-201ENST00000292779 CDCA8Q53HL2 280 aa20.09■□□□□ 0.81
CCDC116-201ENST00000292779 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
CCDC116-201ENST00000292779 CFAP70Q5T0N1 1121 aa20.08■□□□□ 0.81
CCDC116-201ENST00000292779 CDCA7LQ96GN5 454 aa20.08■□□□□ 0.81
CCDC116-201ENST00000292779 MYOM1P52179 1685 aa20.08■□□□□ 0.81
CCDC116-201ENST00000292779 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.8
CCDC116-201ENST00000292779 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
CCDC116-201ENST00000292779 PREX1Q8TCU6 1659 aa20.06■□□□□ 0.8
CCDC116-201ENST00000292779 NOS1P29475 1434 aa20.06■□□□□ 0.8
CCDC116-201ENST00000292779 MYOM2P54296 1465 aa20.06■□□□□ 0.8
CCDC116-201ENST00000292779 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
CCDC116-201ENST00000292779 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
CCDC116-201ENST00000292779 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
CCDC116-201ENST00000292779 KDM5AP29375 1690 aaKnown RBP20.05■□□□□ 0.8
CCDC116-201ENST00000292779 ARHGAP31Q2M1Z3 1444 aa20.04■□□□□ 0.8
CCDC116-201ENST00000292779 ASXL1Q8IXJ9 1541 aa20.03■□□□□ 0.8
CCDC116-201ENST00000292779 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
CCDC116-201ENST00000292779 MYO5BQ9ULV0 1848 aa20.02■□□□□ 0.8
CCDC116-201ENST00000292779 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
CCDC116-201ENST00000292779 EXOC6Q8TAG9 804 aa20.02■□□□□ 0.8
CCDC116-201ENST00000292779 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
CCDC116-201ENST00000292779 IDI1Q13907 227 aa19.99■□□□□ 0.79
CCDC116-201ENST00000292779 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
CCDC116-201ENST00000292779 NRXN1Q9ULB1 1477 aa19.98■□□□□ 0.79
CCDC116-201ENST00000292779 ADGRB3O60242 1522 aa19.98■□□□□ 0.79
CCDC116-201ENST00000292779 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
CCDC116-201ENST00000292779 NPC1L1Q9UHC9 1359 aa19.97■□□□□ 0.79
CCDC116-201ENST00000292779 ZMYM3Q14202 1370 aa19.96■□□□□ 0.79
CCDC116-201ENST00000292779 PIK3C2GO75747 1445 aa19.96■□□□□ 0.79
CCDC116-201ENST00000292779 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
CCDC116-201ENST00000292779 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
CCDC116-201ENST00000292779 CEBPAP49715 358 aaPredicted RBP19.94■□□□□ 0.78
CCDC116-201ENST00000292779 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
CCDC116-201ENST00000292779 NUTM2DQ5VT03 806 aaPredicted RBP19.93■□□□□ 0.78
CCDC116-201ENST00000292779 ERICH6Q7L0X2 663 aa19.93■□□□□ 0.78
CCDC116-201ENST00000292779 PLEKHH1Q9ULM0 1364 aa19.92■□□□□ 0.78
CCDC116-201ENST00000292779 PLIN1O60240 522 aa19.92■□□□□ 0.78
CCDC116-201ENST00000292779 SPATA31D1Q6ZQQ2 1576 aa19.92■□□□□ 0.78
CCDC116-201ENST00000292779 PPLO60437 1756 aa19.92■□□□□ 0.78
CCDC116-201ENST00000292779 FER1L4A9Z1Z3 1794 aa19.92■□□□□ 0.78
CCDC116-201ENST00000292779 TMEM131LA2VDJ0 1609 aa19.91■□□□□ 0.78
CCDC116-201ENST00000292779 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
CCDC116-201ENST00000292779 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
CCDC116-201ENST00000292779 SETBP1Q9Y6X0 1596 aa19.9■□□□□ 0.78
CCDC116-201ENST00000292779 CARD14Q9BXL6 1004 aa19.9■□□□□ 0.78
CCDC116-201ENST00000292779 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
CCDC116-201ENST00000292779 ESF1Q9H501 851 aaKnown RBP19.88■□□□□ 0.77
CCDC116-201ENST00000292779 TRAK1Q9UPV9 953 aa19.88■□□□□ 0.77
CCDC116-201ENST00000292779 C3P01024 1663 aa19.88■□□□□ 0.77
CCDC116-201ENST00000292779 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
CCDC116-201ENST00000292779 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
CCDC116-201ENST00000292779 ZNF521Q96K83 1311 aa19.87■□□□□ 0.77
CCDC116-201ENST00000292779 DUSP27Q5VZP5 1158 aa19.86■□□□□ 0.77
CCDC116-201ENST00000292779 TMEM132EQ6IEE7 984 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms