RNA–Protein interactions for RNA: ENST00000292579.11

ZNF250-201, Transcript of zinc finger protein 250, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF250, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-201ENST00000292579 NLRP13Q86W25 1043 aa11.71□□□□□ -0.53
ZNF250-201ENST00000292579 ZNF428Q96B54 188 aa11.71□□□□□ -0.53
ZNF250-201ENST00000292579 RIPK4P57078 832 aa11.71□□□□□ -0.54
ZNF250-201ENST00000292579 POLA1P09884 1462 aaPredicted RBP11.71□□□□□ -0.54
ZNF250-201ENST00000292579 ANKRD50Q9ULJ7 1429 aa11.7□□□□□ -0.54
ZNF250-201ENST00000292579 MARCH6O60337 910 aa11.7□□□□□ -0.54
ZNF250-201ENST00000292579 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
ZNF250-201ENST00000292579 PLIN1O60240 522 aa11.69□□□□□ -0.54
ZNF250-201ENST00000292579 ADAMTS2O95450 1211 aa11.69□□□□□ -0.54
ZNF250-201ENST00000292579 RASSF8Q8NHQ8 419 aa11.69□□□□□ -0.54
ZNF250-201ENST00000292579 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
ZNF250-201ENST00000292579 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
ZNF250-201ENST00000292579 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
ZNF250-201ENST00000292579 CUX1P39880 1505 aa11.69□□□□□ -0.54
ZNF250-201ENST00000292579 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
ZNF250-201ENST00000292579 DNTTIP2Q5QJE6 756 aaKnown RBP11.68□□□□□ -0.54
ZNF250-201ENST00000292579 RIC3Q7Z5B4 369 aa11.68□□□□□ -0.54
ZNF250-201ENST00000292579 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
ZNF250-201ENST00000292579 MFAP1P55081 439 aaKnown RBP11.68□□□□□ -0.54
ZNF250-201ENST00000292579 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
ZNF250-201ENST00000292579 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
ZNF250-201ENST00000292579 FYB1O15117 783 aa11.67□□□□□ -0.54
ZNF250-201ENST00000292579 DDX58O95786 925 aaKnown RBP11.67□□□□□ -0.54
ZNF250-201ENST00000292579 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
ZNF250-201ENST00000292579 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
ZNF250-201ENST00000292579 APPP05067 770 aa11.66□□□□□ -0.54
ZNF250-201ENST00000292579 CDK19Q9BWU1 502 aa11.66□□□□□ -0.54
ZNF250-201ENST00000292579 MIA2Q96PC5 1412 aa11.66□□□□□ -0.54
ZNF250-201ENST00000292579 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 GOLGA6L6A8MZA4 724 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 PRDM11Q9NQV5 511 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 APAF1O14727 1248 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 CREBRFQ8IUR6 639 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 PHLDB1Q86UU1 1377 aa11.65□□□□□ -0.54
ZNF250-201ENST00000292579 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
ZNF250-201ENST00000292579 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
ZNF250-201ENST00000292579 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
ZNF250-201ENST00000292579 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
ZNF250-201ENST00000292579 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
ZNF250-201ENST00000292579 PDE4CQ08493 712 aa11.64□□□□□ -0.55
ZNF250-201ENST00000292579 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
ZNF250-201ENST00000292579 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
ZNF250-201ENST00000292579 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
ZNF250-201ENST00000292579 DRC7Q8IY82 874 aa11.63□□□□□ -0.55
ZNF250-201ENST00000292579 ANP32EQ9BTT0 268 aa11.63□□□□□ -0.55
ZNF250-201ENST00000292579 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
ZNF250-201ENST00000292579 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 ANKRD45Q5TZF3 282 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 HMGXB3Q12766 1538 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 CABP4P57796 275 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 LRRC9Q6ZRR7 1453 aa11.62□□□□□ -0.55
ZNF250-201ENST00000292579 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
ZNF250-201ENST00000292579 C9orf84Q5VXU9 1444 aa11.61□□□□□ -0.55
ZNF250-201ENST00000292579 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
ZNF250-201ENST00000292579 NEUROD6Q96NK8 337 aa11.61□□□□□ -0.55
ZNF250-201ENST00000292579 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
ZNF250-201ENST00000292579 PRM3Q9NNZ6 103 aa11.6□□□□□ -0.55
ZNF250-201ENST00000292579 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
ZNF250-201ENST00000292579 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
ZNF250-201ENST00000292579 KIF21BO75037 1637 aa11.6□□□□□ -0.55
ZNF250-201ENST00000292579 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
ZNF250-201ENST00000292579 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
ZNF250-201ENST00000292579 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
ZNF250-201ENST00000292579 NGLY1Q96IV0 654 aa11.6□□□□□ -0.55
ZNF250-201ENST00000292579 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZNF250-201ENST00000292579 ERICH6BQ5W0A0 696 aa11.59□□□□□ -0.55
ZNF250-201ENST00000292579 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
ZNF250-201ENST00000292579 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
ZNF250-201ENST00000292579 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
ZNF250-201ENST00000292579 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
ZNF250-201ENST00000292579 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
ZNF250-201ENST00000292579 SLC4A3P48751 1232 aa11.58□□□□□ -0.56
ZNF250-201ENST00000292579 SLC52A1Q9NWF4 448 aa11.58□□□□□ -0.56
ZNF250-201ENST00000292579 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 MTHFSP49914 203 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 E9PSI1 815 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 WAPLQ7Z5K2 1190 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
ZNF250-201ENST00000292579 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 WASHC2AQ641Q2 1341 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 RRS1Q15050 365 aaKnown RBP11.56□□□□□ -0.56
ZNF250-201ENST00000292579 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 RUNDC1Q96C34 613 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 MYL6BP14649 208 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 SLC12A5Q9H2X9 1139 aa11.56□□□□□ -0.56
ZNF250-201ENST00000292579 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
ZNF250-201ENST00000292579 SLKQ9H2G2 1235 aaPredicted RBP11.55□□□□□ -0.56
ZNF250-201ENST00000292579 L1TD1Q5T7N2 865 aaKnown RBP11.55□□□□□ -0.56
ZNF250-201ENST00000292579 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
ZNF250-201ENST00000292579 NRDCO43847 1150 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms