RNA–Protein interactions for RNA: ENST00000292408.8

FGFR4-201, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene FGFR4, Length 3,122 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-201ENST00000292408 WASHC2CQ9Y4E1 1318 aa21.3■■□□□ 1
FGFR4-201ENST00000292408 SHANK2Q9UPX8 1470 aa21.3■■□□□ 1
FGFR4-201ENST00000292408 SEC24BO95487 1268 aa21.3■■□□□ 1
FGFR4-201ENST00000292408 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
FGFR4-201ENST00000292408 AFAP1Q8N556 730 aa21.29■■□□□ 1
FGFR4-201ENST00000292408 SPRYD3Q8NCJ5 442 aa21.29■■□□□ 1
FGFR4-201ENST00000292408 E9PCH4 1651 aa21.29■■□□□ 1
FGFR4-201ENST00000292408 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
FGFR4-201ENST00000292408 TRPM1Q7Z4N2 1603 aa21.28■■□□□ 1
FGFR4-201ENST00000292408 CLUAP1Q96AJ1 413 aa21.28■■□□□ 1
FGFR4-201ENST00000292408 CHGAP10645 457 aaKnown RBP21.27■■□□□ 1
FGFR4-201ENST00000292408 TNNQ9UQP3 1299 aa21.27■■□□□ 1
FGFR4-201ENST00000292408 GPRASP1Q5JY77 1395 aa21.27■■□□□ 1
FGFR4-201ENST00000292408 CFAP70Q5T0N1 1121 aa21.27■□□□□ 0.99
FGFR4-201ENST00000292408 ZMYM4Q5VZL5 1548 aa21.25■□□□□ 0.99
FGFR4-201ENST00000292408 SAMD9LQ8IVG5 1584 aa21.25■□□□□ 0.99
FGFR4-201ENST00000292408 ADCY10Q96PN6 1610 aa21.25■□□□□ 0.99
FGFR4-201ENST00000292408 RSPH4AQ5TD94 716 aa21.24■□□□□ 0.99
FGFR4-201ENST00000292408 ABCA8O94911 1581 aa21.24■□□□□ 0.99
FGFR4-201ENST00000292408 ZNF521Q96K83 1311 aa21.22■□□□□ 0.99
FGFR4-201ENST00000292408 NUP160Q12769 1436 aa21.21■□□□□ 0.99
FGFR4-201ENST00000292408 WDR7Q9Y4E6 1490 aa21.2■□□□□ 0.98
FGFR4-201ENST00000292408 CARD14Q9BXL6 1004 aa21.2■□□□□ 0.98
FGFR4-201ENST00000292408 POGKQ9P215 609 aa21.18■□□□□ 0.98
FGFR4-201ENST00000292408 PRDM15P57071 1507 aaPredicted RBP21.17■□□□□ 0.98
FGFR4-201ENST00000292408 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
FGFR4-201ENST00000292408 CENPJQ9HC77 1338 aaPredicted RBP21.16■□□□□ 0.98
FGFR4-201ENST00000292408 KIF3BO15066 747 aa21.15■□□□□ 0.98
FGFR4-201ENST00000292408 NUTM2DQ5VT03 806 aaPredicted RBP21.15■□□□□ 0.98
FGFR4-201ENST00000292408 E9PSI1 815 aa21.14■□□□□ 0.98
FGFR4-201ENST00000292408 TRAK1Q9UPV9 953 aa21.14■□□□□ 0.98
FGFR4-201ENST00000292408 CDC42BPBQ9Y5S2 1711 aa21.13■□□□□ 0.97
FGFR4-201ENST00000292408 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
FGFR4-201ENST00000292408 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
FGFR4-201ENST00000292408 RLBP1P12271 317 aa21.13■□□□□ 0.97
FGFR4-201ENST00000292408 ADGRF5Q8IZF2 1346 aa21.13■□□□□ 0.97
FGFR4-201ENST00000292408 WWC1Q8IX03 1113 aa21.12■□□□□ 0.97
FGFR4-201ENST00000292408 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
FGFR4-201ENST00000292408 ARHGEF5Q12774 1597 aa21.11■□□□□ 0.97
FGFR4-201ENST00000292408 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
FGFR4-201ENST00000292408 USP19O94966 1318 aa21.1■□□□□ 0.97
FGFR4-201ENST00000292408 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
FGFR4-201ENST00000292408 TRAPPC8Q9Y2L5 1435 aa21.1■□□□□ 0.97
FGFR4-201ENST00000292408 TTC37Q6PGP7 1564 aa21.1■□□□□ 0.97
FGFR4-201ENST00000292408 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
FGFR4-201ENST00000292408 PCDHB15Q9Y5E8 787 aa21.1■□□□□ 0.97
FGFR4-201ENST00000292408 TRMT2AQ8IZ69 625 aaKnown RBP21.09■□□□□ 0.97
FGFR4-201ENST00000292408 GZF1Q9H116 711 aaPredicted RBP21.09■□□□□ 0.97
FGFR4-201ENST00000292408 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
FGFR4-201ENST00000292408 TCP11L2Q8N4U5 519 aa21.08■□□□□ 0.96
FGFR4-201ENST00000292408 ASXL1Q8IXJ9 1541 aa21.05■□□□□ 0.96
FGFR4-201ENST00000292408 MYO5CQ9NQX4 1742 aa21.05■□□□□ 0.96
FGFR4-201ENST00000292408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.05■□□□□ 0.96
FGFR4-201ENST00000292408 PDZRN3Q9UPQ7 1066 aa21.04■□□□□ 0.96
FGFR4-201ENST00000292408 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
FGFR4-201ENST00000292408 SCAF11Q99590 1463 aaKnown RBP21.03■□□□□ 0.96
FGFR4-201ENST00000292408 PODXL2Q9NZ53 605 aa21.02■□□□□ 0.96
FGFR4-201ENST00000292408 MTHFSP49914 203 aa21.02■□□□□ 0.96
FGFR4-201ENST00000292408 RARSP54136 660 aaKnown RBP21.02■□□□□ 0.96
FGFR4-201ENST00000292408 TSR2Q969E8 191 aaKnown RBP21.02■□□□□ 0.96
FGFR4-201ENST00000292408 PREX2Q70Z35 1606 aa21.01■□□□□ 0.95
FGFR4-201ENST00000292408 EIF3AQ14152 1382 aaKnown RBP21.01■□□□□ 0.95
FGFR4-201ENST00000292408 INSRP06213 1382 aa21■□□□□ 0.95
FGFR4-201ENST00000292408 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
FGFR4-201ENST00000292408 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
FGFR4-201ENST00000292408 BECN1Q14457 450 aa21■□□□□ 0.95
FGFR4-201ENST00000292408 PDE3AQ14432 1141 aa21■□□□□ 0.95
FGFR4-201ENST00000292408 MFAP1P55081 439 aaKnown RBP20.99■□□□□ 0.95
FGFR4-201ENST00000292408 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
FGFR4-201ENST00000292408 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
FGFR4-201ENST00000292408 UPF2Q9HAU5 1272 aaKnown RBP20.98■□□□□ 0.95
FGFR4-201ENST00000292408 EIF2AK4Q9P2K8 1649 aaKnown RBP20.97■□□□□ 0.95
FGFR4-201ENST00000292408 U2SURPO15042 1029 aaKnown RBP20.97■□□□□ 0.95
FGFR4-201ENST00000292408 UGGT1Q9NYU2 1555 aa20.97■□□□□ 0.95
FGFR4-201ENST00000292408 TBC1D2Q9BYX2 928 aa20.96■□□□□ 0.95
FGFR4-201ENST00000292408 UNC13BO14795 1591 aa20.96■□□□□ 0.95
FGFR4-201ENST00000292408 DUOX2Q9NRD8 1548 aa20.96■□□□□ 0.95
FGFR4-201ENST00000292408 FTSJ3Q8IY81 847 aaKnown RBP20.95■□□□□ 0.95
FGFR4-201ENST00000292408 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
FGFR4-201ENST00000292408 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
FGFR4-201ENST00000292408 ATP10AO60312 1499 aa20.95■□□□□ 0.94
FGFR4-201ENST00000292408 NSD3Q9BZ95 1437 aa20.94■□□□□ 0.94
FGFR4-201ENST00000292408 GGT6Q6P531 493 aa20.94■□□□□ 0.94
FGFR4-201ENST00000292408 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
FGFR4-201ENST00000292408 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
FGFR4-201ENST00000292408 MAST1Q9Y2H9 1570 aa20.93■□□□□ 0.94
FGFR4-201ENST00000292408 SCAPERQ9BY12 1400 aa20.92■□□□□ 0.94
FGFR4-201ENST00000292408 STK26Q9P289 416 aa20.91■□□□□ 0.94
FGFR4-201ENST00000292408 ITPRIPQ8IWB1 547 aa20.91■□□□□ 0.94
FGFR4-201ENST00000292408 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
FGFR4-201ENST00000292408 CABP2Q9NPB3 220 aa20.9■□□□□ 0.94
FGFR4-201ENST00000292408 MADDQ8WXG6 1647 aa20.9■□□□□ 0.94
FGFR4-201ENST00000292408 ERVK-7P63135 1459 aa20.9■□□□□ 0.94
FGFR4-201ENST00000292408 SMC4Q9NTJ3 1288 aa20.89■□□□□ 0.94
FGFR4-201ENST00000292408 PLCH2O75038 1416 aa20.89■□□□□ 0.94
FGFR4-201ENST00000292408 RWDD1Q9H446 243 aaPredicted RBP20.89■□□□□ 0.93
FGFR4-201ENST00000292408 KANK1Q14678 1352 aa20.88■□□□□ 0.93
FGFR4-201ENST00000292408 FOXD4L1Q9NU39 408 aa20.88■□□□□ 0.93
FGFR4-201ENST00000292408 PANK2Q9BZ23 570 aa20.88■□□□□ 0.93
FGFR4-201ENST00000292408 EXOSC9Q06265 439 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms