RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 MYO5BQ9ULV0 1848 aa23.32■■□□□ 1.32
PDE6D-201ENST00000287600 SLC26A8Q96RN1 970 aa23.3■■□□□ 1.32
PDE6D-201ENST00000287600 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
PDE6D-201ENST00000287600 NWD1Q149M9 1564 aa23.28■■□□□ 1.32
PDE6D-201ENST00000287600 BCANQ96GW7 911 aa23.28■■□□□ 1.32
PDE6D-201ENST00000287600 E9PCH4 1651 aa23.26■■□□□ 1.31
PDE6D-201ENST00000287600 NKTRP30414 1462 aaKnown RBP23.26■■□□□ 1.31
PDE6D-201ENST00000287600 KCNA6P17658 529 aa23.26■■□□□ 1.31
PDE6D-201ENST00000287600 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
PDE6D-201ENST00000287600 IQGAP3Q86VI3 1631 aa23.25■■□□□ 1.31
PDE6D-201ENST00000287600 ROCK1Q13464 1354 aa23.25■■□□□ 1.31
PDE6D-201ENST00000287600 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
PDE6D-201ENST00000287600 PPP1R15AO75807 674 aaPredicted RBP23.24■■□□□ 1.31
PDE6D-201ENST00000287600 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
PDE6D-201ENST00000287600 PROSER2Q86WR7 435 aaPredicted RBP23.22■■□□□ 1.31
PDE6D-201ENST00000287600 PLEKHG1Q9ULL1 1385 aa23.21■■□□□ 1.31
PDE6D-201ENST00000287600 ROBO1Q9Y6N7 1651 aa23.2■■□□□ 1.3
PDE6D-201ENST00000287600 RBM33Q96EV2 1170 aaKnown RBP23.2■■□□□ 1.3
PDE6D-201ENST00000287600 FAM135BQ49AJ0 1406 aa23.19■■□□□ 1.3
PDE6D-201ENST00000287600 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
PDE6D-201ENST00000287600 CHD2O14647 1828 aaKnown RBP23.18■■□□□ 1.3
PDE6D-201ENST00000287600 ITGAEP38570 1179 aa23.18■■□□□ 1.3
PDE6D-201ENST00000287600 HDGFP51858 240 aaKnown RBP23.18■■□□□ 1.3
PDE6D-201ENST00000287600 MSH6P52701 1360 aa23.16■■□□□ 1.3
PDE6D-201ENST00000287600 NUP155O75694 1391 aa23.14■■□□□ 1.3
PDE6D-201ENST00000287600 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
PDE6D-201ENST00000287600 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
PDE6D-201ENST00000287600 NUTM2DQ5VT03 806 aaPredicted RBP23.1■■□□□ 1.29
PDE6D-201ENST00000287600 SPHKAPQ2M3C7 1700 aa23.1■■□□□ 1.29
PDE6D-201ENST00000287600 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
PDE6D-201ENST00000287600 TBX22Q9Y458 520 aa23.08■■□□□ 1.29
PDE6D-201ENST00000287600 PHLPP1O60346 1717 aa23.08■■□□□ 1.28
PDE6D-201ENST00000287600 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.28
PDE6D-201ENST00000287600 TRPM2O94759 1503 aa23.06■■□□□ 1.28
PDE6D-201ENST00000287600 C14orf37Q86TY3 774 aa23.04■■□□□ 1.28
PDE6D-201ENST00000287600 SLAIN2Q9P270 581 aa23.04■■□□□ 1.28
PDE6D-201ENST00000287600 NCOA3Q9Y6Q9 1424 aa23.03■■□□□ 1.28
PDE6D-201ENST00000287600 PIK3R4Q99570 1358 aa23.02■■□□□ 1.28
PDE6D-201ENST00000287600 RGS17Q9UGC6 210 aaPredicted RBP23.01■■□□□ 1.27
PDE6D-201ENST00000287600 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.01■■□□□ 1.27
PDE6D-201ENST00000287600 NRXN3Q9Y4C0 1643 aa22.99■■□□□ 1.27
PDE6D-201ENST00000287600 COL16A1Q07092 1604 aaPredicted RBP22.98■■□□□ 1.27
PDE6D-201ENST00000287600 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
PDE6D-201ENST00000287600 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
PDE6D-201ENST00000287600 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
PDE6D-201ENST00000287600 JCADQ9P266 1359 aa22.96■■□□□ 1.27
PDE6D-201ENST00000287600 XRN1Q8IZH2 1706 aaKnown RBP22.96■■□□□ 1.27
PDE6D-201ENST00000287600 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
PDE6D-201ENST00000287600 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
PDE6D-201ENST00000287600 ATF3P18847 181 aa22.94■■□□□ 1.26
PDE6D-201ENST00000287600 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
PDE6D-201ENST00000287600 C19orf44Q9H6X5 657 aa22.93■■□□□ 1.26
PDE6D-201ENST00000287600 NAIPQ13075 1403 aa22.92■■□□□ 1.26
PDE6D-201ENST00000287600 KIF1BO60333 1816 aa22.92■■□□□ 1.26
PDE6D-201ENST00000287600 AHDC1Q5TGY3 1603 aaPredicted RBP22.92■■□□□ 1.26
PDE6D-201ENST00000287600 NEXMIFQ5QGS0 1516 aa22.91■■□□□ 1.26
PDE6D-201ENST00000287600 MAPK8IP2Q13387 824 aaPredicted RBP22.9■■□□□ 1.26
PDE6D-201ENST00000287600 POTEAQ6S8J7 498 aa22.89■■□□□ 1.25
PDE6D-201ENST00000287600 DCCP43146 1447 aa22.89■■□□□ 1.25
PDE6D-201ENST00000287600 PPP4R3CPQ6ZMV5 832 aa22.88■■□□□ 1.25
PDE6D-201ENST00000287600 SHPRHQ149N8 1683 aa22.87■■□□□ 1.25
PDE6D-201ENST00000287600 POTEDQ86YR6 584 aa22.86■■□□□ 1.25
PDE6D-201ENST00000287600 METP08581 1390 aa22.86■■□□□ 1.25
PDE6D-201ENST00000287600 LRP6O75581 1613 aa22.85■■□□□ 1.25
PDE6D-201ENST00000287600 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
PDE6D-201ENST00000287600 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
PDE6D-201ENST00000287600 ASXL1Q8IXJ9 1541 aa22.83■■□□□ 1.25
PDE6D-201ENST00000287600 TRIM52Q96A61 297 aa22.83■■□□□ 1.25
PDE6D-201ENST00000287600 SETD1AO15047 1707 aaKnown RBP22.82■■□□□ 1.24
PDE6D-201ENST00000287600 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
PDE6D-201ENST00000287600 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
PDE6D-201ENST00000287600 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
PDE6D-201ENST00000287600 MST1RQ04912 1400 aa22.81■■□□□ 1.24
PDE6D-201ENST00000287600 ADGRL3Q9HAR2 1447 aa22.8■■□□□ 1.24
PDE6D-201ENST00000287600 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
PDE6D-201ENST00000287600 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
PDE6D-201ENST00000287600 PPLO60437 1756 aa22.75■■□□□ 1.23
PDE6D-201ENST00000287600 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
PDE6D-201ENST00000287600 VGFO15240 615 aaPredicted RBP22.73■■□□□ 1.23
PDE6D-201ENST00000287600 ZNF772Q68DY9 489 aaPredicted RBP22.72■■□□□ 1.23
PDE6D-201ENST00000287600 SETD5Q9C0A6 1442 aa22.72■■□□□ 1.23
PDE6D-201ENST00000287600 NUTM2BA6NNL0 878 aaPredicted RBP22.71■■□□□ 1.23
PDE6D-201ENST00000287600 NUTM2EB1AL46 878 aaPredicted RBP22.71■■□□□ 1.23
PDE6D-201ENST00000287600 NUTM2AQ8IVF1 878 aaPredicted RBP22.71■■□□□ 1.23
PDE6D-201ENST00000287600 RPGRIP1LQ68CZ1 1315 aa22.7■■□□□ 1.22
PDE6D-201ENST00000287600 ROBO2Q9HCK4 1378 aa22.67■■□□□ 1.22
PDE6D-201ENST00000287600 C1orf167Q5SNV9 1468 aa22.66■■□□□ 1.22
PDE6D-201ENST00000287600 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
PDE6D-201ENST00000287600 DDX17Q92841 729 aaKnown RBP22.66■■□□□ 1.22
PDE6D-201ENST00000287600 LRRC59Q96AG4 307 aaKnown RBP22.66■■□□□ 1.22
PDE6D-201ENST00000287600 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
PDE6D-201ENST00000287600 PNPLA6Q8IY17 1366 aa22.63■■□□□ 1.21
PDE6D-201ENST00000287600 LAMC1P11047 1609 aa22.63■■□□□ 1.21
PDE6D-201ENST00000287600 IFT172Q9UG01 1749 aa22.61■■□□□ 1.21
PDE6D-201ENST00000287600 AFF2P51816 1311 aa22.6■■□□□ 1.21
PDE6D-201ENST00000287600 RXRBP28702 533 aa22.59■■□□□ 1.21
PDE6D-201ENST00000287600 CDC42BPGQ6DT37 1551 aa22.59■■□□□ 1.21
PDE6D-201ENST00000287600 C8orf37Q96NL8 207 aa22.58■■□□□ 1.21
PDE6D-201ENST00000287600 ORAI2Q96SN7 254 aa22.57■■□□□ 1.2
PDE6D-201ENST00000287600 CDK12Q9NYV4 1490 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms