RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 CLSTN1O94985 981 aa13.87□□□□□ -0.19
CXCL13-201ENST00000286758 CSPP1Q1MSJ5 1256 aa13.87□□□□□ -0.19
CXCL13-201ENST00000286758 HS1BP3Q53T59 392 aa13.87□□□□□ -0.19
CXCL13-201ENST00000286758 SPNS2Q8IVW8 549 aa13.87□□□□□ -0.19
CXCL13-201ENST00000286758 ZHX1Q9UKY1 873 aaPredicted RBP13.87□□□□□ -0.19
CXCL13-201ENST00000286758 CCDC144AA2RUR9 1427 aa13.87□□□□□ -0.19
CXCL13-201ENST00000286758 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
CXCL13-201ENST00000286758 PDCD7Q8N8D1 485 aaKnown RBP13.86□□□□□ -0.19
CXCL13-201ENST00000286758 RRBP1Q9P2E9 1410 aaKnown RBP13.85□□□□□ -0.19
CXCL13-201ENST00000286758 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
CXCL13-201ENST00000286758 GEMIN8Q9NWZ8 242 aaKnown RBP13.85□□□□□ -0.19
CXCL13-201ENST00000286758 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
CXCL13-201ENST00000286758 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
CXCL13-201ENST00000286758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
CXCL13-201ENST00000286758 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
CXCL13-201ENST00000286758 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
CXCL13-201ENST00000286758 BECN1Q14457 450 aa13.83□□□□□ -0.2
CXCL13-201ENST00000286758 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
CXCL13-201ENST00000286758 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
CXCL13-201ENST00000286758 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
CXCL13-201ENST00000286758 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
CXCL13-201ENST00000286758 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
CXCL13-201ENST00000286758 EMP3P54852 163 aa13.82□□□□□ -0.2
CXCL13-201ENST00000286758 FAM193AP78312 1265 aa13.82□□□□□ -0.2
CXCL13-201ENST00000286758 CNPY4Q8N129 248 aa13.82□□□□□ -0.2
CXCL13-201ENST00000286758 HDAC5Q9UQL6 1122 aa13.82□□□□□ -0.2
CXCL13-201ENST00000286758 PSEN1P49768 467 aa13.81□□□□□ -0.2
CXCL13-201ENST00000286758 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
CXCL13-201ENST00000286758 RIPK4P57078 832 aa13.8□□□□□ -0.2
CXCL13-201ENST00000286758 RALBP1Q15311 655 aa13.8□□□□□ -0.2
CXCL13-201ENST00000286758 ZSCAN30Q86W11 494 aa13.8□□□□□ -0.2
CXCL13-201ENST00000286758 APPP05067 770 aa13.79□□□□□ -0.2
CXCL13-201ENST00000286758 MCM5P33992 734 aa13.79□□□□□ -0.2
CXCL13-201ENST00000286758 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
CXCL13-201ENST00000286758 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
CXCL13-201ENST00000286758 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
CXCL13-201ENST00000286758 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
CXCL13-201ENST00000286758 CLIP1P30622 1438 aa13.78□□□□□ -0.2
CXCL13-201ENST00000286758 KIF21BO75037 1637 aa13.78□□□□□ -0.2
CXCL13-201ENST00000286758 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
CXCL13-201ENST00000286758 MSNP26038 577 aaKnown RBP13.77□□□□□ -0.21
CXCL13-201ENST00000286758 SETQ01105 290 aaPredicted RBP13.77□□□□□ -0.21
CXCL13-201ENST00000286758 NCOA2Q15596 1464 aa13.77□□□□□ -0.21
CXCL13-201ENST00000286758 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
CXCL13-201ENST00000286758 EFCC1Q9HA90 598 aa13.76□□□□□ -0.21
CXCL13-201ENST00000286758 FAM13BQ9NYF5 915 aa13.76□□□□□ -0.21
CXCL13-201ENST00000286758 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.76□□□□□ -0.21
CXCL13-201ENST00000286758 G3V3G9 751 aa13.75□□□□□ -0.21
CXCL13-201ENST00000286758 PLCD4Q9BRC7 762 aa13.75□□□□□ -0.21
CXCL13-201ENST00000286758 POGKQ9P215 609 aa13.75□□□□□ -0.21
CXCL13-201ENST00000286758 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
CXCL13-201ENST00000286758 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
CXCL13-201ENST00000286758 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
CXCL13-201ENST00000286758 SASS6Q6UVJ0 657 aa13.73□□□□□ -0.21
CXCL13-201ENST00000286758 POLR3GLQ9BT43 218 aa13.73□□□□□ -0.21
CXCL13-201ENST00000286758 GRPEL1Q9HAV7 217 aa13.73□□□□□ -0.21
CXCL13-201ENST00000286758 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
CXCL13-201ENST00000286758 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
CXCL13-201ENST00000286758 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
CXCL13-201ENST00000286758 DDX11L8A8MPP1 907 aa13.71□□□□□ -0.21
CXCL13-201ENST00000286758 GABPB1Q06547 395 aaPredicted RBP13.71□□□□□ -0.21
CXCL13-201ENST00000286758 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
CXCL13-201ENST00000286758 NBPF20Q3BBV1 942 aa13.71□□□□□ -0.21
CXCL13-201ENST00000286758 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
CXCL13-201ENST00000286758 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
CXCL13-201ENST00000286758 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
CXCL13-201ENST00000286758 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
CXCL13-201ENST00000286758 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
CXCL13-201ENST00000286758 UQCRHP07919 91 aa13.7□□□□□ -0.22
CXCL13-201ENST00000286758 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
CXCL13-201ENST00000286758 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
CXCL13-201ENST00000286758 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
CXCL13-201ENST00000286758 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
CXCL13-201ENST00000286758 ADGRL1O94910 1474 aa13.69□□□□□ -0.22
CXCL13-201ENST00000286758 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
CXCL13-201ENST00000286758 HMGN5P82970 282 aaKnown RBP13.68□□□□□ -0.22
CXCL13-201ENST00000286758 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
CXCL13-201ENST00000286758 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
CXCL13-201ENST00000286758 VGLL3A8MV65 326 aa13.67□□□□□ -0.22
CXCL13-201ENST00000286758 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
CXCL13-201ENST00000286758 CALCOCO1Q9P1Z2 691 aa13.67□□□□□ -0.22
CXCL13-201ENST00000286758 TIGD1Q96MW7 591 aa13.66□□□□□ -0.22
CXCL13-201ENST00000286758 RBM25P49756 843 aaKnown RBP13.65□□□□□ -0.22
CXCL13-201ENST00000286758 FEZ1Q99689 392 aa13.65□□□□□ -0.22
CXCL13-201ENST00000286758 CABP2Q9NPB3 220 aa13.65□□□□□ -0.22
CXCL13-201ENST00000286758 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
CXCL13-201ENST00000286758 AKNAQ7Z591 1439 aa13.64□□□□□ -0.23
CXCL13-201ENST00000286758 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
CXCL13-201ENST00000286758 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
CXCL13-201ENST00000286758 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
CXCL13-201ENST00000286758 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
CXCL13-201ENST00000286758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
CXCL13-201ENST00000286758 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
CXCL13-201ENST00000286758 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
CXCL13-201ENST00000286758 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
CXCL13-201ENST00000286758 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
CXCL13-201ENST00000286758 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
CXCL13-201ENST00000286758 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
CXCL13-201ENST00000286758 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
CXCL13-201ENST00000286758 KRTAP3-3Q9BYR6 98 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms