RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 ENOX2Q16206 610 aaKnown RBP16.01■□□□□ 0.15
SMARCA5-201ENST00000283131 TERF2IPQ9NYB0 399 aa16.01■□□□□ 0.15
SMARCA5-201ENST00000283131 RNF20Q5VTR2 975 aa16■□□□□ 0.15
SMARCA5-201ENST00000283131 DYDC1Q8WWB3 177 aa16■□□□□ 0.15
SMARCA5-201ENST00000283131 KLHL34Q8N239 644 aa16■□□□□ 0.15
SMARCA5-201ENST00000283131 NAT10Q9H0A0 1025 aaKnown RBP15.99■□□□□ 0.15
SMARCA5-201ENST00000283131 CLUAP1Q96AJ1 413 aa15.99■□□□□ 0.15
SMARCA5-201ENST00000283131 SEPT11Q9NVA2 429 aaKnown RBP15.99■□□□□ 0.15
SMARCA5-201ENST00000283131 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
SMARCA5-201ENST00000283131 GOLGA6L10A6NI86 522 aa15.99■□□□□ 0.15
SMARCA5-201ENST00000283131 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
SMARCA5-201ENST00000283131 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.98■□□□□ 0.15
SMARCA5-201ENST00000283131 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
SMARCA5-201ENST00000283131 EID1Q9Y6B2 187 aa15.98■□□□□ 0.15
SMARCA5-201ENST00000283131 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
SMARCA5-201ENST00000283131 PDILTQ8N807 584 aa15.98■□□□□ 0.15
SMARCA5-201ENST00000283131 LEKR1Q6ZMV7 388 aa15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 XBP1P17861 261 aa15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 AXDND1Q5T1B0 1012 aaPredicted RBP15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 GGT6Q6P531 493 aa15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 C9orf78Q9NZ63 289 aaPredicted RBP15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 CCDC66A2RUB6 948 aa15.97■□□□□ 0.15
SMARCA5-201ENST00000283131 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
SMARCA5-201ENST00000283131 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
SMARCA5-201ENST00000283131 CT47B1P0C2W7 299 aaPredicted RBP15.96■□□□□ 0.15
SMARCA5-201ENST00000283131 TTLL5Q6EMB2 1281 aa15.96■□□□□ 0.15
SMARCA5-201ENST00000283131 CGNL1Q0VF96 1302 aa15.96■□□□□ 0.15
SMARCA5-201ENST00000283131 CHMP5Q9NZZ3 219 aa15.96■□□□□ 0.15
SMARCA5-201ENST00000283131 CCDC180Q9P1Z9 1646 aa15.96■□□□□ 0.14
SMARCA5-201ENST00000283131 REC8O95072 547 aa15.96■□□□□ 0.14
SMARCA5-201ENST00000283131 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
SMARCA5-201ENST00000283131 RALBP1Q15311 655 aa15.95■□□□□ 0.14
SMARCA5-201ENST00000283131 KIAA0754O94854 1291 aa15.95■□□□□ 0.14
SMARCA5-201ENST00000283131 TTC5Q8N0Z6 440 aa15.95■□□□□ 0.14
SMARCA5-201ENST00000283131 PPM1FP49593 454 aaPredicted RBP15.95■□□□□ 0.14
SMARCA5-201ENST00000283131 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
SMARCA5-201ENST00000283131 GBP2P32456 591 aaPredicted RBP15.93■□□□□ 0.14
SMARCA5-201ENST00000283131 MEX3CQ5U5Q3 659 aaKnown RBP15.93■□□□□ 0.14
SMARCA5-201ENST00000283131 IFIT2P09913 472 aaKnown RBP15.93■□□□□ 0.14
SMARCA5-201ENST00000283131 NGEFQ8N5V2 710 aa15.93■□□□□ 0.14
SMARCA5-201ENST00000283131 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
SMARCA5-201ENST00000283131 MAGEC2Q9UBF1 373 aaPredicted RBP15.93■□□□□ 0.14
SMARCA5-201ENST00000283131 CCER2I3L3R5 266 aa15.92■□□□□ 0.14
SMARCA5-201ENST00000283131 ROCK2O75116 1388 aaKnown RBP15.92■□□□□ 0.14
SMARCA5-201ENST00000283131 HSP90AB4PQ58FF6 505 aa15.92■□□□□ 0.14
SMARCA5-201ENST00000283131 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
SMARCA5-201ENST00000283131 RALYLQ86SE5 291 aaKnown RBP15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 NEBLO76041 1014 aa15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 DESP17661 470 aa15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 PDCL3Q9H2J4 239 aa15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 TEFQ10587 303 aa15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 VPS37CA5D8V6 355 aaPredicted RBP15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 NF2P35240 595 aa15.91■□□□□ 0.14
SMARCA5-201ENST00000283131 FILIP1LQ4L180 1135 aa15.9■□□□□ 0.14
SMARCA5-201ENST00000283131 LUC7LQ9NQ29 371 aaKnown RBP15.9■□□□□ 0.14
SMARCA5-201ENST00000283131 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
SMARCA5-201ENST00000283131 MTERF4Q7Z6M4 381 aaKnown RBP15.9■□□□□ 0.14
SMARCA5-201ENST00000283131 RABEP1Q15276 862 aa15.89■□□□□ 0.13
SMARCA5-201ENST00000283131 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
SMARCA5-201ENST00000283131 BCL11BQ9C0K0 894 aaPredicted RBP15.89■□□□□ 0.13
SMARCA5-201ENST00000283131 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
SMARCA5-201ENST00000283131 TXLNAP40222 546 aa15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 FOSBP53539 338 aa15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 CCP110O43303 1012 aa15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 GSE1Q14687 1217 aa15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 WASHC2AQ641Q2 1341 aa15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 DDX58O95786 925 aaKnown RBP15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 CCDC27Q2M243 656 aa15.88■□□□□ 0.13
SMARCA5-201ENST00000283131 TAX1BP1Q86VP1 789 aa15.87■□□□□ 0.13
SMARCA5-201ENST00000283131 FYB1O15117 783 aa15.87■□□□□ 0.13
SMARCA5-201ENST00000283131 FAM43AQ8N2R8 423 aa15.87■□□□□ 0.13
SMARCA5-201ENST00000283131 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
SMARCA5-201ENST00000283131 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
SMARCA5-201ENST00000283131 CCDC112Q8NEF3 446 aa15.86■□□□□ 0.13
SMARCA5-201ENST00000283131 ZNHIT6Q9NWK9 470 aaKnown RBP15.86■□□□□ 0.13
SMARCA5-201ENST00000283131 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
SMARCA5-201ENST00000283131 G3BP1Q13283 466 aaKnown RBP eCLIP15.86■□□□□ 0.131e-8■■■■□ 24.1
SMARCA5-201ENST00000283131 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
SMARCA5-201ENST00000283131 GRIPAP1Q4V328 841 aa15.86■□□□□ 0.13
SMARCA5-201ENST00000283131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMARCA5-201ENST00000283131 TAF3Q5VWG9 929 aa15.85■□□□□ 0.13
SMARCA5-201ENST00000283131 TXLNBQ8N3L3 684 aa15.85■□□□□ 0.13
SMARCA5-201ENST00000283131 TRIM21P19474 475 aaKnown RBP15.85■□□□□ 0.13
SMARCA5-201ENST00000283131 STAMBPO95630 424 aa15.84■□□□□ 0.13
SMARCA5-201ENST00000283131 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
SMARCA5-201ENST00000283131 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
SMARCA5-201ENST00000283131 USP8P40818 1118 aa15.83■□□□□ 0.13
SMARCA5-201ENST00000283131 CCDC91Q7Z6B0 441 aa15.83■□□□□ 0.13
SMARCA5-201ENST00000283131 PPM1EQ8WY54 764 aa15.83■□□□□ 0.13
SMARCA5-201ENST00000283131 CCDC181Q5TID7 509 aa15.83■□□□□ 0.12
SMARCA5-201ENST00000283131 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.12
SMARCA5-201ENST00000283131 PHLDB1Q86UU1 1377 aa15.83■□□□□ 0.12
SMARCA5-201ENST00000283131 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
SMARCA5-201ENST00000283131 BRPF1P55201 1214 aaPredicted RBP15.82■□□□□ 0.12
SMARCA5-201ENST00000283131 CENPHQ9H3R5 247 aa15.82■□□□□ 0.12
SMARCA5-201ENST00000283131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMARCA5-201ENST00000283131 GOLGA3Q08378 1498 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms