RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 SCAF11Q99590 1463 aaKnown RBP34.59■■■■□ 3.13
CTF1-201ENST00000279804 PPLO60437 1756 aa34.59■■■■□ 3.13
CTF1-201ENST00000279804 NUTM2DQ5VT03 806 aaPredicted RBP34.59■■■■□ 3.13
CTF1-201ENST00000279804 TXNDC2Q86VQ3 553 aa34.59■■■■□ 3.13
CTF1-201ENST00000279804 NEXMIFQ5QGS0 1516 aa34.58■■■■□ 3.13
CTF1-201ENST00000279804 RGL3Q3MIN7 710 aa34.57■■■■□ 3.13
CTF1-201ENST00000279804 IFT172Q9UG01 1749 aa34.56■■■■□ 3.12
CTF1-201ENST00000279804 IQGAP1P46940 1657 aa34.55■■■■□ 3.12
CTF1-201ENST00000279804 EID1Q9Y6B2 187 aa34.55■■■■□ 3.12
CTF1-201ENST00000279804 SIN3AQ96ST3 1273 aa34.54■■■■□ 3.12
CTF1-201ENST00000279804 SENP3Q9H4L4 574 aaPredicted RBP34.54■■■■□ 3.12
CTF1-201ENST00000279804 MED14O60244 1454 aa34.51■■■■□ 3.12
CTF1-201ENST00000279804 NPHP4O75161 1426 aaPredicted RBP34.5■■■■□ 3.11
CTF1-201ENST00000279804 PPP1R15AO75807 674 aaPredicted RBP34.48■■■■□ 3.11
CTF1-201ENST00000279804 HDGFP51858 240 aaKnown RBP34.46■■■■□ 3.11
CTF1-201ENST00000279804 NEUROD1Q13562 356 aa34.46■■■■□ 3.11
CTF1-201ENST00000279804 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.46■■■■□ 3.11
CTF1-201ENST00000279804 RPGRIP1LQ68CZ1 1315 aa34.43■■■■□ 3.1
CTF1-201ENST00000279804 DMRT2Q9Y5R5 561 aa34.42■■■■□ 3.1
CTF1-201ENST00000279804 PLEKHG1Q9ULL1 1385 aa34.41■■■■□ 3.1
CTF1-201ENST00000279804 NRXN3Q9Y4C0 1643 aa34.4■■■■□ 3.1
CTF1-201ENST00000279804 CLSPNQ9HAW4 1339 aa34.4■■■■□ 3.1
CTF1-201ENST00000279804 BCANQ96GW7 911 aa34.39■■■■□ 3.1
CTF1-201ENST00000279804 VGFO15240 615 aaPredicted RBP34.35■■■■□ 3.09
CTF1-201ENST00000279804 SLC26A8Q96RN1 970 aa34.35■■■■□ 3.09
CTF1-201ENST00000279804 ADGRF5Q8IZF2 1346 aa34.34■■■■□ 3.09
CTF1-201ENST00000279804 SETBP1Q9Y6X0 1596 aa34.33■■■■□ 3.09
CTF1-201ENST00000279804 DCAF11Q8TEB1 546 aa34.32■■■■□ 3.08
CTF1-201ENST00000279804 KDM2AQ9Y2K7 1162 aa34.31■■■■□ 3.08
CTF1-201ENST00000279804 ADAMTS13Q76LX8 1427 aa34.31■■■■□ 3.08
CTF1-201ENST00000279804 MYOM2P54296 1465 aa34.3■■■■□ 3.08
CTF1-201ENST00000279804 SETD1AO15047 1707 aaKnown RBP34.28■■■■□ 3.08
CTF1-201ENST00000279804 STRCP1A6NGW2 1772 aa34.27■■■■□ 3.08
CTF1-201ENST00000279804 L3MBTL2Q969R5 705 aa34.26■■■■□ 3.08
CTF1-201ENST00000279804 DIP2AQ14689 1571 aa34.25■■■■□ 3.07
CTF1-201ENST00000279804 NRXN1Q9ULB1 1477 aa34.25■■■■□ 3.07
CTF1-201ENST00000279804 ALKQ9UM73 1620 aa34.24■■■■□ 3.07
CTF1-201ENST00000279804 PIK3C2GO75747 1445 aa34.24■■■■□ 3.07
CTF1-201ENST00000279804 ZNF335Q9H4Z2 1342 aaPredicted RBP34.24■■■■□ 3.07
CTF1-201ENST00000279804 CHD2O14647 1828 aaKnown RBP34.22■■■■□ 3.07
CTF1-201ENST00000279804 TBX22Q9Y458 520 aa34.19■■■■□ 3.06
CTF1-201ENST00000279804 TONSLQ96HA7 1378 aa34.19■■■■□ 3.06
CTF1-201ENST00000279804 METP08581 1390 aa34.15■■■■□ 3.06
CTF1-201ENST00000279804 LAMC1P11047 1609 aa34.14■■■■□ 3.06
CTF1-201ENST00000279804 LTBP4Q8N2S1 1624 aa34.14■■■■□ 3.06
CTF1-201ENST00000279804 STAC3Q96MF2 364 aa34.12■■■■□ 3.05
CTF1-201ENST00000279804 NWD1Q149M9 1564 aa34.11■■■■□ 3.05
CTF1-201ENST00000279804 CFAP70Q5T0N1 1121 aa34.11■■■■□ 3.05
CTF1-201ENST00000279804 ASXL1Q8IXJ9 1541 aa34.11■■■■□ 3.05
CTF1-201ENST00000279804 PRAG1Q86YV5 1406 aa34.1■■■■□ 3.05
CTF1-201ENST00000279804 PTPRUQ92729 1446 aa34.1■■■■□ 3.05
CTF1-201ENST00000279804 C14orf93Q9H972 538 aaKnown RBP34.08■■■■□ 3.05
CTF1-201ENST00000279804 XRN1Q8IZH2 1706 aaKnown RBP34.07■■■■□ 3.04
CTF1-201ENST00000279804 PIK3R4Q99570 1358 aa34.06■■■■□ 3.04
CTF1-201ENST00000279804 KIAA1210Q9ULL0 1709 aa34.05■■■■□ 3.04
CTF1-201ENST00000279804 KCNA6P17658 529 aa34.05■■■■□ 3.04
CTF1-201ENST00000279804 TMEM132EQ6IEE7 984 aa34.05■■■■□ 3.04
CTF1-201ENST00000279804 TRPM1Q7Z4N2 1603 aa34.03■■■■□ 3.04
CTF1-201ENST00000279804 XIRP1Q702N8 1843 aaKnown RBP34.02■■■■□ 3.04
CTF1-201ENST00000279804 CPS1P31327 1500 aa34.02■■■■□ 3.04
CTF1-201ENST00000279804 AMOTL2Q9Y2J4 779 aa34.02■■■■□ 3.04
CTF1-201ENST00000279804 ADGRB1O14514 1584 aa34■■■■□ 3.03
CTF1-201ENST00000279804 ZEB1P37275 1124 aaPredicted RBP33.99■■■■□ 3.03
CTF1-201ENST00000279804 NBPF8Q3BBV2 869 aa33.99■■■■□ 3.03
CTF1-201ENST00000279804 NKTRP30414 1462 aaKnown RBP33.98■■■■□ 3.03
CTF1-201ENST00000279804 LRRC7Q96NW7 1537 aa33.97■■■■□ 3.03
CTF1-201ENST00000279804 KNDC1Q76NI1 1749 aa33.95■■■■□ 3.03
CTF1-201ENST00000279804 RBM33Q96EV2 1170 aaKnown RBP33.95■■■■□ 3.03
CTF1-201ENST00000279804 STK26Q9P289 416 aa33.94■■■■□ 3.02
CTF1-201ENST00000279804 YTHDC2Q9H6S0 1430 aaKnown RBP33.94■■■■□ 3.02
CTF1-201ENST00000279804 NBPF1Q3BBV0 1214 aa33.93■■■■□ 3.02
CTF1-201ENST00000279804 TIMELESSQ9UNS1 1208 aa33.93■■■■□ 3.02
CTF1-201ENST00000279804 PROSER2Q86WR7 435 aaPredicted RBP33.91■■■■□ 3.02
CTF1-201ENST00000279804 LRPPRCP42704 1394 aaKnown RBP33.9■■■■□ 3.02
CTF1-201ENST00000279804 ROBO2Q9HCK4 1378 aa33.88■■■■□ 3.01
CTF1-201ENST00000279804 CERKQ8TCT0 537 aa33.87■■■■□ 3.01
CTF1-201ENST00000279804 TMEM94Q12767 1356 aa33.87■■■■□ 3.01
CTF1-201ENST00000279804 TECPR2O15040 1411 aa33.85■■■■□ 3.01
CTF1-201ENST00000279804 PTCH1Q13635 1447 aa33.85■■■■□ 3.01
CTF1-201ENST00000279804 ABCC11Q96J66 1382 aa33.84■■■■□ 3.01
CTF1-201ENST00000279804 ARHGEF28Q8N1W1 1705 aaKnown RBP33.84■■■■□ 3.01
CTF1-201ENST00000279804 RALGAPBQ86X10 1494 aa33.82■■■■□ 3
CTF1-201ENST00000279804 TRAK1Q9UPV9 953 aa33.82■■■■□ 3
CTF1-201ENST00000279804 ROCK2O75116 1388 aaKnown RBP33.82■■■■□ 3
CTF1-201ENST00000279804 NALCNQ8IZF0 1738 aa33.81■■■■□ 3
CTF1-201ENST00000279804 WAPLQ7Z5K2 1190 aa33.78■■■■□ 3
CTF1-201ENST00000279804 PLEKHH1Q9ULM0 1364 aa33.78■■■■□ 3
CTF1-201ENST00000279804 DLC1Q96QB1 1528 aa33.78■■■■□ 3
CTF1-201ENST00000279804 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.76■■■■□ 3
CTF1-201ENST00000279804 IQSEC2Q5JU85 1478 aa33.75■■■□□ 2.99
CTF1-201ENST00000279804 C14orf37Q86TY3 774 aa33.74■■■□□ 2.99
CTF1-201ENST00000279804 FAM135BQ49AJ0 1406 aa33.73■■■□□ 2.99
CTF1-201ENST00000279804 GPRASP1Q5JY77 1395 aa33.72■■■□□ 2.99
CTF1-201ENST00000279804 PRAM1Q96QH2 718 aa33.72■■■□□ 2.99
CTF1-201ENST00000279804 SAFB2Q14151 953 aaKnown RBP eCLIP33.71■■■□□ 2.99
CTF1-201ENST00000279804 NCOA3Q9Y6Q9 1424 aa33.71■■■□□ 2.99
CTF1-201ENST00000279804 CARD11Q9BXL7 1154 aa33.69■■■□□ 2.98
CTF1-201ENST00000279804 SIRT1Q96EB6 747 aa33.68■■■□□ 2.98
CTF1-201ENST00000279804 ADGRL3Q9HAR2 1447 aa33.68■■■□□ 2.98
CTF1-201ENST00000279804 POGKQ9P215 609 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms