RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 NUTM2DQ5VT03 806 aaPredicted RBP14.46□□□□□ -0.09
LCN2-201ENST00000277480 PPLO60437 1756 aa14.46□□□□□ -0.09
LCN2-201ENST00000277480 UBR1Q8IWV7 1749 aa14.45□□□□□ -0.1
LCN2-201ENST00000277480 STAC3Q96MF2 364 aa14.45□□□□□ -0.1
LCN2-201ENST00000277480 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
LCN2-201ENST00000277480 ZFYVE9O95405 1425 aa14.44□□□□□ -0.1
LCN2-201ENST00000277480 RIMS2Q9UQ26 1411 aa14.44□□□□□ -0.1
LCN2-201ENST00000277480 NBPF1Q3BBV0 1214 aa14.44□□□□□ -0.1
LCN2-201ENST00000277480 TRPM1Q7Z4N2 1603 aa14.44□□□□□ -0.1
LCN2-201ENST00000277480 KDM5AP29375 1690 aaKnown RBP14.42□□□□□ -0.1
LCN2-201ENST00000277480 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
LCN2-201ENST00000277480 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
LCN2-201ENST00000277480 TMEM2Q9UHN6 1383 aa14.41□□□□□ -0.1
LCN2-201ENST00000277480 CEP170BQ9Y4F5 1589 aaPredicted RBP14.41□□□□□ -0.1
LCN2-201ENST00000277480 ARHGAP23Q9P227 1491 aa14.4□□□□□ -0.1
LCN2-201ENST00000277480 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
LCN2-201ENST00000277480 CFAP70Q5T0N1 1121 aa14.4□□□□□ -0.1
LCN2-201ENST00000277480 ROCK2O75116 1388 aaKnown RBP14.39□□□□□ -0.11
LCN2-201ENST00000277480 SLIT1O75093 1534 aa14.38□□□□□ -0.11
LCN2-201ENST00000277480 HSPA5P11021 654 aaKnown RBP14.38□□□□□ -0.11
LCN2-201ENST00000277480 LTKP29376 864 aa14.38□□□□□ -0.11
LCN2-201ENST00000277480 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
LCN2-201ENST00000277480 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
LCN2-201ENST00000277480 C14orf93Q9H972 538 aaKnown RBP14.38□□□□□ -0.11
LCN2-201ENST00000277480 ZNF142P52746 1687 aaPredicted RBP14.38□□□□□ -0.11
LCN2-201ENST00000277480 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
LCN2-201ENST00000277480 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
LCN2-201ENST00000277480 KIAA1210Q9ULL0 1709 aa14.36□□□□□ -0.11
LCN2-201ENST00000277480 THEMISQ8N1K5 641 aaPredicted RBP14.36□□□□□ -0.11
LCN2-201ENST00000277480 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.36□□□□□ -0.11
LCN2-201ENST00000277480 USP47Q96K76 1375 aa14.35□□□□□ -0.11
LCN2-201ENST00000277480 ADGRB1O14514 1584 aa14.35□□□□□ -0.11
LCN2-201ENST00000277480 LAMC1P11047 1609 aa14.35□□□□□ -0.11
LCN2-201ENST00000277480 ASXL1Q8IXJ9 1541 aa14.35□□□□□ -0.11
LCN2-201ENST00000277480 NRXN3Q9Y4C0 1643 aa14.34□□□□□ -0.11
LCN2-201ENST00000277480 EIF4G2P78344 907 aaKnown RBP eCLIP14.34□□□□□ -0.11
LCN2-201ENST00000277480 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.12
LCN2-201ENST00000277480 SETBP1Q9Y6X0 1596 aa14.33□□□□□ -0.12
LCN2-201ENST00000277480 ALKQ9UM73 1620 aa14.33□□□□□ -0.12
LCN2-201ENST00000277480 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
LCN2-201ENST00000277480 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
LCN2-201ENST00000277480 SETD1BQ9UPS6 1966 aaKnown RBP14.31□□□□□ -0.12
LCN2-201ENST00000277480 HDGFP51858 240 aaKnown RBP14.31□□□□□ -0.12
LCN2-201ENST00000277480 ADAMTS13Q76LX8 1427 aa14.31□□□□□ -0.12
LCN2-201ENST00000277480 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
LCN2-201ENST00000277480 IQGAP1P46940 1657 aa14.3□□□□□ -0.12
LCN2-201ENST00000277480 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
LCN2-201ENST00000277480 ST20-MTHFSA0A0A6YYL1 179 aa14.29□□□□□ -0.12
LCN2-201ENST00000277480 EID1Q9Y6B2 187 aa14.29□□□□□ -0.12
LCN2-201ENST00000277480 MED14O60244 1454 aa14.29□□□□□ -0.12
LCN2-201ENST00000277480 C11orf95C9JLR9 678 aaPredicted RBP14.28□□□□□ -0.12
LCN2-201ENST00000277480 METP08581 1390 aa14.28□□□□□ -0.12
LCN2-201ENST00000277480 LMTK3Q96Q04 1460 aa14.26□□□□□ -0.13
LCN2-201ENST00000277480 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
LCN2-201ENST00000277480 TRAK1Q9UPV9 953 aa14.26□□□□□ -0.13
LCN2-201ENST00000277480 YTHDC2Q9H6S0 1430 aaKnown RBP14.25□□□□□ -0.13
LCN2-201ENST00000277480 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
LCN2-201ENST00000277480 TESK2Q96S53 571 aa14.25□□□□□ -0.13
LCN2-201ENST00000277480 HSPA2P54652 639 aa14.24□□□□□ -0.13
LCN2-201ENST00000277480 BCANQ96GW7 911 aa14.24□□□□□ -0.13
LCN2-201ENST00000277480 SLC26A8Q96RN1 970 aa14.24□□□□□ -0.13
LCN2-201ENST00000277480 STK26Q9P289 416 aa14.24□□□□□ -0.13
LCN2-201ENST00000277480 LRPPRCP42704 1394 aaKnown RBP14.23□□□□□ -0.13
LCN2-201ENST00000277480 WASHC2AQ641Q2 1341 aa14.23□□□□□ -0.13
LCN2-201ENST00000277480 PTPRUQ92729 1446 aa14.23□□□□□ -0.13
LCN2-201ENST00000277480 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
LCN2-201ENST00000277480 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
LCN2-201ENST00000277480 DIP2AQ14689 1571 aa14.21□□□□□ -0.14
LCN2-201ENST00000277480 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.14
LCN2-201ENST00000277480 EIF3AQ14152 1382 aaKnown RBP14.21□□□□□ -0.14
LCN2-201ENST00000277480 ABCC11Q96J66 1382 aa14.21□□□□□ -0.14
LCN2-201ENST00000277480 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
LCN2-201ENST00000277480 KIF7Q2M1P5 1343 aa14.2□□□□□ -0.14
LCN2-201ENST00000277480 DISP3Q9P2K9 1392 aa14.2□□□□□ -0.14
LCN2-201ENST00000277480 CENPJQ9HC77 1338 aaPredicted RBP14.19□□□□□ -0.14
LCN2-201ENST00000277480 TECPR2O15040 1411 aa14.19□□□□□ -0.14
LCN2-201ENST00000277480 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
LCN2-201ENST00000277480 PLEKHH1Q9ULM0 1364 aa14.19□□□□□ -0.14
LCN2-201ENST00000277480 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
LCN2-201ENST00000277480 PRAM1Q96QH2 718 aa14.17□□□□□ -0.14
LCN2-201ENST00000277480 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
LCN2-201ENST00000277480 CPS1P31327 1500 aa14.16□□□□□ -0.14
LCN2-201ENST00000277480 KNDC1Q76NI1 1749 aa14.16□□□□□ -0.14
LCN2-201ENST00000277480 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
LCN2-201ENST00000277480 SBNO2Q9Y2G9 1366 aa14.16□□□□□ -0.14
LCN2-201ENST00000277480 QRICH2Q9H0J4 1663 aa14.15□□□□□ -0.14
LCN2-201ENST00000277480 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
LCN2-201ENST00000277480 DDX10Q13206 875 aaKnown RBP14.15□□□□□ -0.14
LCN2-201ENST00000277480 SAFB2Q14151 953 aaKnown RBP eCLIP14.15□□□□□ -0.14
LCN2-201ENST00000277480 AMOTL2Q9Y2J4 779 aa14.15□□□□□ -0.14
LCN2-201ENST00000277480 TMF1P82094 1093 aa14.14□□□□□ -0.15
LCN2-201ENST00000277480 SIRT1Q96EB6 747 aa14.14□□□□□ -0.15
LCN2-201ENST00000277480 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
LCN2-201ENST00000277480 FAM135BQ49AJ0 1406 aa14.14□□□□□ -0.15
LCN2-201ENST00000277480 POGKQ9P215 609 aa14.13□□□□□ -0.15
LCN2-201ENST00000277480 TULP4Q9NRJ4 1543 aa14.13□□□□□ -0.15
LCN2-201ENST00000277480 STRCQ7RTU9 1775 aa14.13□□□□□ -0.15
LCN2-201ENST00000277480 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
LCN2-201ENST00000277480 POLR3GLQ9BT43 218 aa14.12□□□□□ -0.15
LCN2-201ENST00000277480 PTCH1Q13635 1447 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms