RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ESPNB1AK53 854 aa11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 TSPY4P0CV99 314 aa11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 TSPY10P0CW01 314 aa11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 ZCCHC11Q5TAX3 1644 aaKnown RBP11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 INSRP06213 1382 aa11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 BCAR3O75815 825 aa11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
HMGCLL1-201ENST00000274901 EIF3AQ14152 1382 aaKnown RBP11.78□□□□□ -0.52
HMGCLL1-201ENST00000274901 ANKRD30AQ9BXX3 1397 aa11.78□□□□□ -0.52
HMGCLL1-201ENST00000274901 CDC42BPBQ9Y5S2 1711 aa11.78□□□□□ -0.52
HMGCLL1-201ENST00000274901 ARHGAP5Q13017 1502 aa11.78□□□□□ -0.52
HMGCLL1-201ENST00000274901 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.52
HMGCLL1-201ENST00000274901 PRDM4Q9UKN5 801 aa11.77□□□□□ -0.53
HMGCLL1-201ENST00000274901 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.53
HMGCLL1-201ENST00000274901 TRAK2O60296 914 aa11.77□□□□□ -0.53
HMGCLL1-201ENST00000274901 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
HMGCLL1-201ENST00000274901 DISP3Q9P2K9 1392 aa11.76□□□□□ -0.53
HMGCLL1-201ENST00000274901 TBC1D32Q96NH3 1257 aa11.76□□□□□ -0.53
HMGCLL1-201ENST00000274901 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
HMGCLL1-201ENST00000274901 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
HMGCLL1-201ENST00000274901 ARHGEF12Q9NZN5 1544 aa11.75□□□□□ -0.53
HMGCLL1-201ENST00000274901 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
HMGCLL1-201ENST00000274901 MRE11P49959 708 aa11.75□□□□□ -0.53
HMGCLL1-201ENST00000274901 PANK3Q9H999 370 aa11.75□□□□□ -0.53
HMGCLL1-201ENST00000274901 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 ANKRD50Q9ULJ7 1429 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 ADGRL2O95490 1459 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 GAS2L3Q86XJ1 694 aa11.74□□□□□ -0.53
HMGCLL1-201ENST00000274901 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
HMGCLL1-201ENST00000274901 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
HMGCLL1-201ENST00000274901 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
HMGCLL1-201ENST00000274901 PDCL3Q9H2J4 239 aa11.72□□□□□ -0.53
HMGCLL1-201ENST00000274901 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
HMGCLL1-201ENST00000274901 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
HMGCLL1-201ENST00000274901 TRMT2AQ8IZ69 625 aaKnown RBP11.72□□□□□ -0.53
HMGCLL1-201ENST00000274901 CENPJQ9HC77 1338 aaPredicted RBP11.72□□□□□ -0.53
HMGCLL1-201ENST00000274901 CCDC141Q6ZP82 1450 aa11.72□□□□□ -0.53
HMGCLL1-201ENST00000274901 PANK1Q8TE04 598 aa11.71□□□□□ -0.53
HMGCLL1-201ENST00000274901 MYO5CQ9NQX4 1742 aa11.71□□□□□ -0.53
HMGCLL1-201ENST00000274901 RTEL1-TNFRSF6BF6WH68 1400 aa11.71□□□□□ -0.53
HMGCLL1-201ENST00000274901 TPM2P07951 284 aa11.71□□□□□ -0.53
HMGCLL1-201ENST00000274901 EFCAB2Q5VUJ9 269 aa11.71□□□□□ -0.53
HMGCLL1-201ENST00000274901 RIPK4P57078 832 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 CALD1Q05682 793 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 CCDC146Q8IYE0 955 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 TESK2Q96S53 571 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 MAPK8IP3Q9UPT6 1336 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 PLCH2O75038 1416 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 TRPM1Q7Z4N2 1603 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 NUP155O75694 1391 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 ARHGEF5Q12774 1597 aa11.7□□□□□ -0.54
HMGCLL1-201ENST00000274901 A0A0U1RQG5 324 aaPredicted RBP11.69□□□□□ -0.54
HMGCLL1-201ENST00000274901 NPM1P06748 294 aaKnown RBP eCLIP11.69□□□□□ -0.54
HMGCLL1-201ENST00000274901 CLUAP1Q96AJ1 413 aa11.69□□□□□ -0.54
HMGCLL1-201ENST00000274901 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 PPP2R1AP30153 589 aa11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 RSPH4AQ5TD94 716 aa11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 NKTRP30414 1462 aaKnown RBP11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 ASXL2Q76L83 1435 aa11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
HMGCLL1-201ENST00000274901 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
HMGCLL1-201ENST00000274901 CHMP5Q9NZZ3 219 aa11.67□□□□□ -0.54
HMGCLL1-201ENST00000274901 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
HMGCLL1-201ENST00000274901 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
HMGCLL1-201ENST00000274901 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
HMGCLL1-201ENST00000274901 MAGI2Q86UL8 1455 aa11.66□□□□□ -0.54
HMGCLL1-201ENST00000274901 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
HMGCLL1-201ENST00000274901 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
HMGCLL1-201ENST00000274901 TRIM44Q96DX7 344 aaPredicted RBP11.65□□□□□ -0.54
HMGCLL1-201ENST00000274901 APAF1O14727 1248 aa11.65□□□□□ -0.54
HMGCLL1-201ENST00000274901 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
HMGCLL1-201ENST00000274901 CGNL1Q0VF96 1302 aa11.64□□□□□ -0.55
HMGCLL1-201ENST00000274901 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-201ENST00000274901 DDIT3P35638 169 aa11.64□□□□□ -0.55
HMGCLL1-201ENST00000274901 CYB5RLQ6IPT4 315 aa11.64□□□□□ -0.55
HMGCLL1-201ENST00000274901 RLBP1P12271 317 aa11.63□□□□□ -0.55
HMGCLL1-201ENST00000274901 AAMPQ13685 434 aa11.63□□□□□ -0.55
HMGCLL1-201ENST00000274901 PRDM15P57071 1507 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 OFD1O75665 1012 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 PDE3AQ14432 1141 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 SPAG9O60271 1321 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 GPRASP1Q5JY77 1395 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 DDX11L8A8MPP1 907 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 RGL3Q3MIN7 710 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 TNPO1Q92973 898 aaKnown RBP11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 ARID3AQ99856 593 aa11.62□□□□□ -0.55
HMGCLL1-201ENST00000274901 C22orf23Q9BZE7 217 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms