RNA–Protein interactions for RNA: ENST00000274170.8

CDH18-201, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 2,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-201ENST00000274170 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
CDH18-201ENST00000274170 NUP155O75694 1391 aa11.14□□□□□ -0.63
CDH18-201ENST00000274170 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
CDH18-201ENST00000274170 CLTCL1P53675 1640 aa11.12□□□□□ -0.63
CDH18-201ENST00000274170 ZFYVE9O95405 1425 aa11.12□□□□□ -0.63
CDH18-201ENST00000274170 TMEM2Q9UHN6 1383 aa11.12□□□□□ -0.63
CDH18-201ENST00000274170 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
CDH18-201ENST00000274170 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
CDH18-201ENST00000274170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDH18-201ENST00000274170 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
CDH18-201ENST00000274170 IFT172Q9UG01 1749 aa11.11□□□□□ -0.63
CDH18-201ENST00000274170 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
CDH18-201ENST00000274170 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
CDH18-201ENST00000274170 CHD2O14647 1828 aaKnown RBP11.1□□□□□ -0.63
CDH18-201ENST00000274170 PPLO60437 1756 aa11.09□□□□□ -0.63
CDH18-201ENST00000274170 ERICH6Q7L0X2 663 aa11.08□□□□□ -0.63
CDH18-201ENST00000274170 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
CDH18-201ENST00000274170 IDI1Q13907 227 aa11.08□□□□□ -0.64
CDH18-201ENST00000274170 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
CDH18-201ENST00000274170 PLEKHG1Q9ULL1 1385 aa11.07□□□□□ -0.64
CDH18-201ENST00000274170 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
CDH18-201ENST00000274170 NEXMIFQ5QGS0 1516 aa11.06□□□□□ -0.64
CDH18-201ENST00000274170 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
CDH18-201ENST00000274170 NRXN3Q9Y4C0 1643 aa11.06□□□□□ -0.64
CDH18-201ENST00000274170 ITGAEP38570 1179 aa11.05□□□□□ -0.64
CDH18-201ENST00000274170 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDH18-201ENST00000274170 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
CDH18-201ENST00000274170 RIMS2Q9UQ26 1411 aa11.04□□□□□ -0.64
CDH18-201ENST00000274170 PIK3R4Q99570 1358 aa11.04□□□□□ -0.64
CDH18-201ENST00000274170 CERKQ8TCT0 537 aa11.04□□□□□ -0.64
CDH18-201ENST00000274170 NKTRP30414 1462 aaKnown RBP11.04□□□□□ -0.64
CDH18-201ENST00000274170 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
CDH18-201ENST00000274170 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
CDH18-201ENST00000274170 RPGRIP1LQ68CZ1 1315 aa11.03□□□□□ -0.64
CDH18-201ENST00000274170 FBXO41Q8TF61 875 aa11.03□□□□□ -0.64
CDH18-201ENST00000274170 NCOA3Q9Y6Q9 1424 aa11.02□□□□□ -0.64
CDH18-201ENST00000274170 XRN1Q8IZH2 1706 aaKnown RBP11.02□□□□□ -0.65
CDH18-201ENST00000274170 RAB3GAP2Q9H2M9 1393 aa11.01□□□□□ -0.65
CDH18-201ENST00000274170 LAMC1P11047 1609 aa11.01□□□□□ -0.65
CDH18-201ENST00000274170 LTKP29376 864 aa11.01□□□□□ -0.65
CDH18-201ENST00000274170 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
CDH18-201ENST00000274170 SPATA31E1Q6ZUB1 1445 aa11□□□□□ -0.65
CDH18-201ENST00000274170 LRRC7Q96NW7 1537 aa11□□□□□ -0.65
CDH18-201ENST00000274170 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
CDH18-201ENST00000274170 KNDC1Q76NI1 1749 aa10.99□□□□□ -0.65
CDH18-201ENST00000274170 ADAMTS13Q76LX8 1427 aa10.99□□□□□ -0.65
CDH18-201ENST00000274170 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
CDH18-201ENST00000274170 STAG3Q9UJ98 1225 aa10.99□□□□□ -0.65
CDH18-201ENST00000274170 TBX22Q9Y458 520 aa10.99□□□□□ -0.65
CDH18-201ENST00000274170 NRXN1Q9ULB1 1477 aa10.97□□□□□ -0.65
CDH18-201ENST00000274170 MYOM2P54296 1465 aa10.97□□□□□ -0.65
CDH18-201ENST00000274170 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
CDH18-201ENST00000274170 ALKQ9UM73 1620 aa10.97□□□□□ -0.65
CDH18-201ENST00000274170 CCDC144AA2RUR9 1427 aa10.96□□□□□ -0.65
CDH18-201ENST00000274170 ZNF335Q9H4Z2 1342 aaPredicted RBP10.96□□□□□ -0.65
CDH18-201ENST00000274170 KCNA6P17658 529 aa10.96□□□□□ -0.66
CDH18-201ENST00000274170 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
CDH18-201ENST00000274170 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
CDH18-201ENST00000274170 ANKRD30BQ9BXX2 1392 aa10.94□□□□□ -0.66
CDH18-201ENST00000274170 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
CDH18-201ENST00000274170 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
CDH18-201ENST00000274170 DCCP43146 1447 aa10.91□□□□□ -0.66
CDH18-201ENST00000274170 PTCH1Q13635 1447 aa10.91□□□□□ -0.66
CDH18-201ENST00000274170 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
CDH18-201ENST00000274170 PIK3C2GO75747 1445 aa10.9□□□□□ -0.66
CDH18-201ENST00000274170 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.9□□□□□ -0.66
CDH18-201ENST00000274170 TECPR2O15040 1411 aa10.9□□□□□ -0.67
CDH18-201ENST00000274170 PTPRUQ92729 1446 aa10.88□□□□□ -0.67
CDH18-201ENST00000274170 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
CDH18-201ENST00000274170 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
CDH18-201ENST00000274170 NALCNQ8IZF0 1738 aa10.88□□□□□ -0.67
CDH18-201ENST00000274170 DLC1Q96QB1 1528 aa10.87□□□□□ -0.67
CDH18-201ENST00000274170 CHGAP10645 457 aaKnown RBP10.86□□□□□ -0.67
CDH18-201ENST00000274170 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
CDH18-201ENST00000274170 FAM135BQ49AJ0 1406 aa10.86□□□□□ -0.67
CDH18-201ENST00000274170 ASXL1Q8IXJ9 1541 aa10.86□□□□□ -0.67
CDH18-201ENST00000274170 TOM1O60784 492 aa10.85□□□□□ -0.67
CDH18-201ENST00000274170 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
CDH18-201ENST00000274170 TMEM94Q12767 1356 aa10.84□□□□□ -0.67
CDH18-201ENST00000274170 MSH5O43196 834 aa10.84□□□□□ -0.67
CDH18-201ENST00000274170 CDC42BPGQ6DT37 1551 aa10.84□□□□□ -0.67
CDH18-201ENST00000274170 SLC26A8Q96RN1 970 aa10.84□□□□□ -0.67
CDH18-201ENST00000274170 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
CDH18-201ENST00000274170 ROBO1Q9Y6N7 1651 aa10.84□□□□□ -0.67
CDH18-201ENST00000274170 METP08581 1390 aa10.84□□□□□ -0.67
CDH18-201ENST00000274170 ADGRB2O60241 1585 aa10.83□□□□□ -0.68
CDH18-201ENST00000274170 NHSL1Q5SYE7 1610 aa10.83□□□□□ -0.68
CDH18-201ENST00000274170 ADGRB1O14514 1584 aa10.83□□□□□ -0.68
CDH18-201ENST00000274170 LRPPRCP42704 1394 aaKnown RBP10.83□□□□□ -0.68
CDH18-201ENST00000274170 MSH6P52701 1360 aa10.82□□□□□ -0.68
CDH18-201ENST00000274170 ABCC11Q96J66 1382 aa10.82□□□□□ -0.68
CDH18-201ENST00000274170 ADGRL3Q9HAR2 1447 aa10.82□□□□□ -0.68
CDH18-201ENST00000274170 FOXD1Q16676 465 aa10.81□□□□□ -0.68
CDH18-201ENST00000274170 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
CDH18-201ENST00000274170 PROSER2Q86WR7 435 aaPredicted RBP10.81□□□□□ -0.68
CDH18-201ENST00000274170 C14orf93Q9H972 538 aaKnown RBP10.81□□□□□ -0.68
CDH18-201ENST00000274170 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
CDH18-201ENST00000274170 DHX57Q6P158 1386 aaKnown RBP10.8□□□□□ -0.68
CDH18-201ENST00000274170 UBAP1LF5GYI3 381 aa10.8□□□□□ -0.68
CDH18-201ENST00000274170 ARHGEF28Q8N1W1 1705 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms