RNA–Protein interactions for RNA: ENST00000273480.3

RNF7-201, Transcript of ring finger protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF7, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-201ENST00000273480 IDI1Q13907 227 aa23.91■■□□□ 1.42
RNF7-201ENST00000273480 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
RNF7-201ENST00000273480 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
RNF7-201ENST00000273480 IQGAP1P46940 1657 aa23.9■■□□□ 1.42
RNF7-201ENST00000273480 PREX1Q8TCU6 1659 aa23.9■■□□□ 1.42
RNF7-201ENST00000273480 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
RNF7-201ENST00000273480 NRXN1Q9ULB1 1477 aa23.89■■□□□ 1.42
RNF7-201ENST00000273480 SCAF11Q99590 1463 aaKnown RBP23.89■■□□□ 1.41
RNF7-201ENST00000273480 KIAA1210Q9ULL0 1709 aa23.88■■□□□ 1.41
RNF7-201ENST00000273480 CNGB1Q14028 1251 aaPredicted RBP23.88■■□□□ 1.41
RNF7-201ENST00000273480 PPLO60437 1756 aa23.88■■□□□ 1.41
RNF7-201ENST00000273480 CLTCQ00610 1675 aaKnown RBP23.87■■□□□ 1.41
RNF7-201ENST00000273480 NUTM2DQ5VT03 806 aaPredicted RBP23.86■■□□□ 1.41
RNF7-201ENST00000273480 SLC52A1Q9NWF4 448 aa23.86■■□□□ 1.41
RNF7-201ENST00000273480 PPP6R1Q9UPN7 881 aa23.86■■□□□ 1.41
RNF7-201ENST00000273480 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
RNF7-201ENST00000273480 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
RNF7-201ENST00000273480 CCDC184Q52MB2 194 aa23.84■■□□□ 1.41
RNF7-201ENST00000273480 ERVK-7P63135 1459 aa23.83■■□□□ 1.41
RNF7-201ENST00000273480 TMF1P82094 1093 aa23.83■■□□□ 1.41
RNF7-201ENST00000273480 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
RNF7-201ENST00000273480 NEXMIFQ5QGS0 1516 aa23.81■■□□□ 1.4
RNF7-201ENST00000273480 MYO5BQ9ULV0 1848 aa23.78■■□□□ 1.4
RNF7-201ENST00000273480 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
RNF7-201ENST00000273480 C14orf93Q9H972 538 aaKnown RBP23.78■■□□□ 1.4
RNF7-201ENST00000273480 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
RNF7-201ENST00000273480 TMEM131LA2VDJ0 1609 aa23.77■■□□□ 1.4
RNF7-201ENST00000273480 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
RNF7-201ENST00000273480 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
RNF7-201ENST00000273480 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
RNF7-201ENST00000273480 ESF1Q9H501 851 aaKnown RBP23.75■■□□□ 1.39
RNF7-201ENST00000273480 SETBP1Q9Y6X0 1596 aa23.73■■□□□ 1.39
RNF7-201ENST00000273480 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
RNF7-201ENST00000273480 SPATA31D1Q6ZQQ2 1576 aa23.73■■□□□ 1.39
RNF7-201ENST00000273480 ADGRB1O14514 1584 aa23.72■■□□□ 1.39
RNF7-201ENST00000273480 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
RNF7-201ENST00000273480 STAG3Q9UJ98 1225 aa23.71■■□□□ 1.39
RNF7-201ENST00000273480 TRAK1Q9UPV9 953 aa23.71■■□□□ 1.39
RNF7-201ENST00000273480 PANK3Q9H999 370 aa23.7■■□□□ 1.38
RNF7-201ENST00000273480 PER1O15534 1290 aaPredicted RBP23.69■■□□□ 1.38
RNF7-201ENST00000273480 ZFYVE9O95405 1425 aa23.68■■□□□ 1.38
RNF7-201ENST00000273480 CDCA8Q53HL2 280 aa23.66■■□□□ 1.38
RNF7-201ENST00000273480 FAM9BQ8IZU0 186 aa23.66■■□□□ 1.38
RNF7-201ENST00000273480 CENPJQ9HC77 1338 aaPredicted RBP23.65■■□□□ 1.38
RNF7-201ENST00000273480 MYO3AQ8NEV4 1616 aa23.64■■□□□ 1.38
RNF7-201ENST00000273480 A2ML1A8K2U0 1454 aa23.64■■□□□ 1.37
RNF7-201ENST00000273480 HNRNPUQ00839 825 aaKnown RBP eCLIP23.62■■□□□ 1.37
RNF7-201ENST00000273480 KTN1Q86UP2 1357 aaKnown RBP23.6■■□□□ 1.37
RNF7-201ENST00000273480 RALBP1Q15311 655 aa23.6■■□□□ 1.37
RNF7-201ENST00000273480 CC2D1BQ5T0F9 858 aaKnown RBP23.59■■□□□ 1.37
RNF7-201ENST00000273480 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
RNF7-201ENST00000273480 KDM5AP29375 1690 aaKnown RBP23.59■■□□□ 1.37
RNF7-201ENST00000273480 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
RNF7-201ENST00000273480 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
RNF7-201ENST00000273480 SLC24A1O60721 1099 aa23.58■■□□□ 1.37
RNF7-201ENST00000273480 MYOM1P52179 1685 aa23.58■■□□□ 1.37
RNF7-201ENST00000273480 STK26Q9P289 416 aa23.57■■□□□ 1.36
RNF7-201ENST00000273480 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
RNF7-201ENST00000273480 TNRQ92752 1358 aa23.57■■□□□ 1.36
RNF7-201ENST00000273480 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
RNF7-201ENST00000273480 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
RNF7-201ENST00000273480 RIMS2Q9UQ26 1411 aa23.57■■□□□ 1.36
RNF7-201ENST00000273480 CEBPAP49715 358 aaPredicted RBP23.55■■□□□ 1.36
RNF7-201ENST00000273480 ARHGEF28Q8N1W1 1705 aaKnown RBP23.54■■□□□ 1.36
RNF7-201ENST00000273480 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
RNF7-201ENST00000273480 ALKQ9UM73 1620 aa23.53■■□□□ 1.36
RNF7-201ENST00000273480 SAFB2Q14151 953 aaKnown RBP eCLIP23.52■■□□□ 1.36
RNF7-201ENST00000273480 KNSTRNQ9Y448 316 aa23.52■■□□□ 1.36
RNF7-201ENST00000273480 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
RNF7-201ENST00000273480 BRD4O60885 1362 aaPredicted RBP23.5■■□□□ 1.35
RNF7-201ENST00000273480 PNISRQ8TF01 805 aaKnown RBP23.49■■□□□ 1.35
RNF7-201ENST00000273480 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
RNF7-201ENST00000273480 AMER1Q5JTC6 1135 aaPredicted RBP23.48■■□□□ 1.35
RNF7-201ENST00000273480 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
RNF7-201ENST00000273480 PTPRMP28827 1452 aa23.46■■□□□ 1.35
RNF7-201ENST00000273480 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
RNF7-201ENST00000273480 PRAM1Q96QH2 718 aa23.45■■□□□ 1.34
RNF7-201ENST00000273480 FER1L4A9Z1Z3 1794 aa23.44■■□□□ 1.34
RNF7-201ENST00000273480 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
RNF7-201ENST00000273480 CARD14Q9BXL6 1004 aa23.44■■□□□ 1.34
RNF7-201ENST00000273480 C3P01024 1663 aa23.44■■□□□ 1.34
RNF7-201ENST00000273480 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
RNF7-201ENST00000273480 EVC2Q86UK5 1308 aa23.43■■□□□ 1.34
RNF7-201ENST00000273480 SLC12A5Q9H2X9 1139 aa23.43■■□□□ 1.34
RNF7-201ENST00000273480 POGKQ9P215 609 aa23.41■■□□□ 1.34
RNF7-201ENST00000273480 TMEM2Q9UHN6 1383 aa23.41■■□□□ 1.34
RNF7-201ENST00000273480 NRXN3Q9Y4C0 1643 aa23.41■■□□□ 1.34
RNF7-201ENST00000273480 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
RNF7-201ENST00000273480 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
RNF7-201ENST00000273480 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
RNF7-201ENST00000273480 SENP3-EIF4A1A0A087X0R7 540 aa23.39■■□□□ 1.33
RNF7-201ENST00000273480 NLRP1Q9C000 1473 aa23.38■■□□□ 1.33
RNF7-201ENST00000273480 LRPPRCP42704 1394 aaKnown RBP23.38■■□□□ 1.33
RNF7-201ENST00000273480 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
RNF7-201ENST00000273480 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
RNF7-201ENST00000273480 METP08581 1390 aa23.37■■□□□ 1.33
RNF7-201ENST00000273480 BCANQ96GW7 911 aa23.37■■□□□ 1.33
RNF7-201ENST00000273480 NPC1L1Q9UHC9 1359 aa23.36■■□□□ 1.33
RNF7-201ENST00000273480 PPP2R1AP30153 589 aa23.35■■□□□ 1.33
RNF7-201ENST00000273480 WAPLQ7Z5K2 1190 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms