RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 WDR70Q9NW82 654 aa11.07□□□□□ -0.64
CTDSPL-201ENST00000273179 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
CTDSPL-201ENST00000273179 TRIM6-TRIM34B2RNG4 842 aa11.06□□□□□ -0.64
CTDSPL-201ENST00000273179 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL-201ENST00000273179 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
CTDSPL-201ENST00000273179 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
CTDSPL-201ENST00000273179 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
CTDSPL-201ENST00000273179 UPF2Q9HAU5 1272 aaKnown RBP11.06□□□□□ -0.64
CTDSPL-201ENST00000273179 MARCH6O60337 910 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 SATB1Q01826 763 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 MYCBPQ99417 103 aaPredicted RBP11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 CALR3Q96L12 384 aaKnown RBP11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 FRMD4BQ9Y2L6 1034 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 GTPBP4Q9BZE4 634 aaKnown RBP11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 IGF1RP08069 1367 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 PRXQ9BXM0 1461 aa11.05□□□□□ -0.64
CTDSPL-201ENST00000273179 SLC52A1Q9NWF4 448 aa11.04□□□□□ -0.64
CTDSPL-201ENST00000273179 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
CTDSPL-201ENST00000273179 TPD52L2O43399 206 aaKnown RBP11.04□□□□□ -0.64
CTDSPL-201ENST00000273179 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
CTDSPL-201ENST00000273179 FRAT1Q92837 279 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL-201ENST00000273179 ZBTB9Q96C00 473 aa11.04□□□□□ -0.64
CTDSPL-201ENST00000273179 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 MFSD4BQ5TF39 518 aa11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 KAT6BQ8WYB5 2073 aa11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 H0YHG0 523 aa11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 SARNPP82979 210 aaKnown RBP11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 GET4Q7L5D6 327 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 OTUD6BQ8N6M0 293 aa11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 CARD10Q9BWT7 1032 aa11.03□□□□□ -0.64
CTDSPL-201ENST00000273179 ARAP1Q96P48 1450 aa11.02□□□□□ -0.64
CTDSPL-201ENST00000273179 HSCBQ8IWL3 235 aa11.02□□□□□ -0.65
CTDSPL-201ENST00000273179 ANKRD13AQ8IZ07 590 aa11.02□□□□□ -0.65
CTDSPL-201ENST00000273179 MSNP26038 577 aaKnown RBP11.02□□□□□ -0.65
CTDSPL-201ENST00000273179 ANKRD62A6NC57 917 aa11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 FOXD4Q12950 439 aaPredicted RBP11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 MMP14P50281 582 aa11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 RIPOR2Q9Y4F9 1068 aa11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 TMCO5BA8MYB1 307 aa11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 TDRD9Q8NDG6 1382 aaKnown RBP11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 RPAINQ86UA6 219 aa11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 ACRBPQ8NEB7 543 aa11.01□□□□□ -0.65
CTDSPL-201ENST00000273179 CARMIL1Q5VZK9 1371 aa11□□□□□ -0.65
CTDSPL-201ENST00000273179 BRPF1P55201 1214 aaPredicted RBP11□□□□□ -0.65
CTDSPL-201ENST00000273179 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
CTDSPL-201ENST00000273179 TPM3P06753 285 aa11□□□□□ -0.65
CTDSPL-201ENST00000273179 CCP110O43303 1012 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 KIAA2012Q0VF49 1180 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 LRCH2Q5VUJ6 765 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 PNMA2Q9UL42 364 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 SETSIPP0DME0 302 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 GOLGA6CA6NDK9 693 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 GOLGA6BA6NDN3 693 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 GOLGA6DP0CG33 693 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 DMTNQ08495 405 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 GOLGA6AQ9NYA3 693 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 WASHC2CQ9Y4E1 1318 aa10.99□□□□□ -0.65
CTDSPL-201ENST00000273179 GEMIN8Q9NWZ8 242 aaKnown RBP10.98□□□□□ -0.65
CTDSPL-201ENST00000273179 CEP83Q9Y592 693 aa10.98□□□□□ -0.65
CTDSPL-201ENST00000273179 EP400NLQ6ZTU2 488 aa10.98□□□□□ -0.65
CTDSPL-201ENST00000273179 KIAA1211Q6ZU35 1233 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 ZNF853P0CG23 659 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 STK26Q9P289 416 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 LIG1P18858 919 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 ZNF280DQ6N043 979 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 CXorf38Q8TB03 319 aa10.97□□□□□ -0.65
CTDSPL-201ENST00000273179 MNS1Q8NEH6 495 aa10.96□□□□□ -0.65
CTDSPL-201ENST00000273179 TIGD1Q96MW7 591 aa10.96□□□□□ -0.65
CTDSPL-201ENST00000273179 KIF3AQ9Y496 699 aa10.96□□□□□ -0.66
CTDSPL-201ENST00000273179 CT47B1P0C2W7 299 aaPredicted RBP10.96□□□□□ -0.66
CTDSPL-201ENST00000273179 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.66
CTDSPL-201ENST00000273179 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.95□□□□□ -0.66
CTDSPL-201ENST00000273179 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
CTDSPL-201ENST00000273179 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
CTDSPL-201ENST00000273179 BIRC2Q13490 618 aa10.95□□□□□ -0.66
CTDSPL-201ENST00000273179 ATL2Q8NHH9 583 aa10.95□□□□□ -0.66
CTDSPL-201ENST00000273179 POLA1P09884 1462 aaPredicted RBP10.94□□□□□ -0.66
CTDSPL-201ENST00000273179 CLCN1P35523 988 aa10.94□□□□□ -0.66
CTDSPL-201ENST00000273179 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
CTDSPL-201ENST00000273179 PROCA1Q8NCQ7 364 aaPredicted RBP10.94□□□□□ -0.66
CTDSPL-201ENST00000273179 HTATSF1O43719 755 aaKnown RBP10.94□□□□□ -0.66
CTDSPL-201ENST00000273179 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 SGSM3Q96HU1 749 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 DEF6Q9H4E7 631 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 CFAP53Q96M91 514 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 YY1AP1Q9H869 796 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 WWC3Q9ULE0 1092 aa10.93□□□□□ -0.66
CTDSPL-201ENST00000273179 ERICH3Q5RHP9 1530 aa10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 SMC4Q9NTJ3 1288 aa10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 STK10O94804 968 aaKnown RBP10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 PSEN1P49768 467 aa10.92□□□□□ -0.66
CTDSPL-201ENST00000273179 ZFYVE27Q5T4F4 411 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms