RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 TPM2P07951 284 aa18.35■□□□□ 0.53
PDPK1-201ENST00000268673 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
PDPK1-201ENST00000268673 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
PDPK1-201ENST00000268673 FGD1P98174 961 aa18.33■□□□□ 0.52
PDPK1-201ENST00000268673 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
PDPK1-201ENST00000268673 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.52
PDPK1-201ENST00000268673 RUNDC1Q96C34 613 aa18.33■□□□□ 0.52
PDPK1-201ENST00000268673 PCF11O94913 1555 aaKnown RBP18.33■□□□□ 0.52
PDPK1-201ENST00000268673 PPP2R1AP30153 589 aa18.32■□□□□ 0.52
PDPK1-201ENST00000268673 MAP7D2Q96T17 732 aa18.32■□□□□ 0.52
PDPK1-201ENST00000268673 STAC3Q96MF2 364 aa18.32■□□□□ 0.52
PDPK1-201ENST00000268673 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
PDPK1-201ENST00000268673 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
PDPK1-201ENST00000268673 HMMRO75330 724 aa18.31■□□□□ 0.52
PDPK1-201ENST00000268673 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
PDPK1-201ENST00000268673 FAM13BQ9NYF5 915 aa18.31■□□□□ 0.52
PDPK1-201ENST00000268673 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
PDPK1-201ENST00000268673 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
PDPK1-201ENST00000268673 NUCB2P80303 420 aa18.3■□□□□ 0.52
PDPK1-201ENST00000268673 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
PDPK1-201ENST00000268673 KIAA1211Q6ZU35 1233 aa18.3■□□□□ 0.52
PDPK1-201ENST00000268673 NASPP49321 788 aaPredicted RBP18.29■□□□□ 0.52
PDPK1-201ENST00000268673 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
PDPK1-201ENST00000268673 RRP9O43818 475 aaKnown RBP18.29■□□□□ 0.52
PDPK1-201ENST00000268673 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
PDPK1-201ENST00000268673 MTERF4Q7Z6M4 381 aaKnown RBP18.28■□□□□ 0.52
PDPK1-201ENST00000268673 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
PDPK1-201ENST00000268673 MCM4P33991 863 aa18.27■□□□□ 0.52
PDPK1-201ENST00000268673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.515e-9■■□□□ 12
PDPK1-201ENST00000268673 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
PDPK1-201ENST00000268673 DAPK1P53355 1430 aa18.26■□□□□ 0.51
PDPK1-201ENST00000268673 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
PDPK1-201ENST00000268673 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
PDPK1-201ENST00000268673 BCAR3O75815 825 aa18.25■□□□□ 0.51
PDPK1-201ENST00000268673 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
PDPK1-201ENST00000268673 PLEKHH2Q8IVE3 1493 aa18.25■□□□□ 0.51
PDPK1-201ENST00000268673 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
PDPK1-201ENST00000268673 UBE2Q2Q8WVN8 375 aa18.24■□□□□ 0.51
PDPK1-201ENST00000268673 KIF16BQ96L93 1317 aa18.24■□□□□ 0.51
PDPK1-201ENST00000268673 ESPNB1AK53 854 aa18.23■□□□□ 0.51
PDPK1-201ENST00000268673 RPRD2Q5VT52 1461 aaKnown RBP18.23■□□□□ 0.51
PDPK1-201ENST00000268673 NAP1L2Q9ULW6 460 aaPredicted RBP18.23■□□□□ 0.51
PDPK1-201ENST00000268673 REC8O95072 547 aa18.23■□□□□ 0.51
PDPK1-201ENST00000268673 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
PDPK1-201ENST00000268673 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
PDPK1-201ENST00000268673 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
PDPK1-201ENST00000268673 NBPF1Q3BBV0 1214 aa18.22■□□□□ 0.51
PDPK1-201ENST00000268673 AMPHP49418 695 aa18.22■□□□□ 0.51
PDPK1-201ENST00000268673 HTATSF1O43719 755 aaKnown RBP18.21■□□□□ 0.51
PDPK1-201ENST00000268673 FOXD4L5Q5VV16 416 aaPredicted RBP18.21■□□□□ 0.51
PDPK1-201ENST00000268673 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
PDPK1-201ENST00000268673 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
PDPK1-201ENST00000268673 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
PDPK1-201ENST00000268673 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
PDPK1-201ENST00000268673 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
PDPK1-201ENST00000268673 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
PDPK1-201ENST00000268673 SKAP1Q86WV1 359 aa18.19■□□□□ 0.5
PDPK1-201ENST00000268673 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
PDPK1-201ENST00000268673 CIZ1Q9ULV3 898 aaPredicted RBP18.19■□□□□ 0.5
PDPK1-201ENST00000268673 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
PDPK1-201ENST00000268673 ATP6V1DQ9Y5K8 247 aa18.18■□□□□ 0.5
PDPK1-201ENST00000268673 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
PDPK1-201ENST00000268673 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
PDPK1-201ENST00000268673 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
PDPK1-201ENST00000268673 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
PDPK1-201ENST00000268673 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
PDPK1-201ENST00000268673 CCDC39Q9UFE4 941 aa18.17■□□□□ 0.5
PDPK1-201ENST00000268673 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
PDPK1-201ENST00000268673 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
PDPK1-201ENST00000268673 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
PDPK1-201ENST00000268673 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
PDPK1-201ENST00000268673 CDC45O75419 566 aa18.15■□□□□ 0.5
PDPK1-201ENST00000268673 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
PDPK1-201ENST00000268673 API5Q9BZZ5 524 aaKnown RBP18.15■□□□□ 0.5
PDPK1-201ENST00000268673 MINK1Q8N4C8 1332 aaPredicted RBP18.15■□□□□ 0.5
PDPK1-201ENST00000268673 SCAPERQ9BY12 1400 aa18.14■□□□□ 0.49
PDPK1-201ENST00000268673 RIPK4P57078 832 aa18.14■□□□□ 0.49
PDPK1-201ENST00000268673 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
PDPK1-201ENST00000268673 ELL2O00472 640 aaPredicted RBP18.13■□□□□ 0.49
PDPK1-201ENST00000268673 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
PDPK1-201ENST00000268673 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
PDPK1-201ENST00000268673 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
PDPK1-201ENST00000268673 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
PDPK1-201ENST00000268673 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
PDPK1-201ENST00000268673 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
PDPK1-201ENST00000268673 MBD3O95983 291 aa18.11■□□□□ 0.49
PDPK1-201ENST00000268673 C9orf84Q5VXU9 1444 aa18.11■□□□□ 0.49
PDPK1-201ENST00000268673 EPRSP07814 1512 aaKnown RBP18.11■□□□□ 0.49
PDPK1-201ENST00000268673 COG3Q96JB2 828 aa18.11■□□□□ 0.49
PDPK1-201ENST00000268673 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
PDPK1-201ENST00000268673 RABEP1Q15276 862 aa18.1■□□□□ 0.49
PDPK1-201ENST00000268673 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
PDPK1-201ENST00000268673 TROQ12816 1431 aaPredicted RBP18.1■□□□□ 0.49
PDPK1-201ENST00000268673 HDAC5Q9UQL6 1122 aa18.1■□□□□ 0.49
PDPK1-201ENST00000268673 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
PDPK1-201ENST00000268673 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
PDPK1-201ENST00000268673 NESP48681 1621 aa18.08■□□□□ 0.49
PDPK1-201ENST00000268673 CUL7Q14999 1698 aa18.08■□□□□ 0.49
PDPK1-201ENST00000268673 MTHFSP49914 203 aa18.08■□□□□ 0.48
PDPK1-201ENST00000268673 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms