RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
SCAF11-201ENST00000266589 ERVK-7P63135 1459 aa16.08■□□□□ 0.17
SCAF11-201ENST00000266589 NRXN1Q9ULB1 1477 aa16.08■□□□□ 0.17
SCAF11-201ENST00000266589 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.16
SCAF11-201ENST00000266589 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
SCAF11-201ENST00000266589 MYO5BQ9ULV0 1848 aa16.06■□□□□ 0.16
SCAF11-201ENST00000266589 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
SCAF11-201ENST00000266589 IDI1Q13907 227 aa16.06■□□□□ 0.16
SCAF11-201ENST00000266589 RPGRIP1LQ68CZ1 1315 aa16.05■□□□□ 0.16
SCAF11-201ENST00000266589 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
SCAF11-201ENST00000266589 TMEM131LA2VDJ0 1609 aa16.05■□□□□ 0.16
SCAF11-201ENST00000266589 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
SCAF11-201ENST00000266589 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
SCAF11-201ENST00000266589 SPATA31D1Q6ZQQ2 1576 aa16.04■□□□□ 0.16
SCAF11-201ENST00000266589 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
SCAF11-201ENST00000266589 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
SCAF11-201ENST00000266589 CFAP70Q5T0N1 1121 aa16.03■□□□□ 0.16
SCAF11-201ENST00000266589 ESF1Q9H501 851 aaKnown RBP16.02■□□□□ 0.15
SCAF11-201ENST00000266589 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
SCAF11-201ENST00000266589 TESK2Q96S53 571 aa16.01■□□□□ 0.15
SCAF11-201ENST00000266589 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
SCAF11-201ENST00000266589 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
SCAF11-201ENST00000266589 DISP3Q9P2K9 1392 aa15.99■□□□□ 0.15
SCAF11-201ENST00000266589 ZMYM3Q14202 1370 aa15.98■□□□□ 0.15
SCAF11-201ENST00000266589 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
SCAF11-201ENST00000266589 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
SCAF11-201ENST00000266589 TMF1P82094 1093 aa15.96■□□□□ 0.15
SCAF11-201ENST00000266589 C14orf93Q9H972 538 aaKnown RBP15.96■□□□□ 0.15
SCAF11-201ENST00000266589 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
SCAF11-201ENST00000266589 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
SCAF11-201ENST00000266589 MYO3AQ8NEV4 1616 aa15.95■□□□□ 0.14
SCAF11-201ENST00000266589 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
SCAF11-201ENST00000266589 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
SCAF11-201ENST00000266589 A2ML1A8K2U0 1454 aa15.93■□□□□ 0.14
SCAF11-201ENST00000266589 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
SCAF11-201ENST00000266589 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
SCAF11-201ENST00000266589 TNRQ92752 1358 aa15.9■□□□□ 0.14
SCAF11-201ENST00000266589 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
SCAF11-201ENST00000266589 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
SCAF11-201ENST00000266589 C3P01024 1663 aa15.89■□□□□ 0.13
SCAF11-201ENST00000266589 TRAK1Q9UPV9 953 aa15.88■□□□□ 0.13
SCAF11-201ENST00000266589 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
SCAF11-201ENST00000266589 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
SCAF11-201ENST00000266589 ASXL1Q8IXJ9 1541 aa15.87■□□□□ 0.13
SCAF11-201ENST00000266589 RIMS2Q9UQ26 1411 aa15.87■□□□□ 0.13
SCAF11-201ENST00000266589 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
SCAF11-201ENST00000266589 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
SCAF11-201ENST00000266589 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
SCAF11-201ENST00000266589 MYOM1P52179 1685 aa15.87■□□□□ 0.13
SCAF11-201ENST00000266589 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
SCAF11-201ENST00000266589 UBR1Q8IWV7 1749 aa15.86■□□□□ 0.13
SCAF11-201ENST00000266589 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
SCAF11-201ENST00000266589 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
SCAF11-201ENST00000266589 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.12
SCAF11-201ENST00000266589 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
SCAF11-201ENST00000266589 PANK3Q9H999 370 aa15.83■□□□□ 0.12
SCAF11-201ENST00000266589 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
SCAF11-201ENST00000266589 NLRP1Q9C000 1473 aa15.82■□□□□ 0.12
SCAF11-201ENST00000266589 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
SCAF11-201ENST00000266589 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
SCAF11-201ENST00000266589 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
SCAF11-201ENST00000266589 NRXN3Q9Y4C0 1643 aa15.8■□□□□ 0.12
SCAF11-201ENST00000266589 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCAF11-201ENST00000266589 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
SCAF11-201ENST00000266589 PTPRMP28827 1452 aa15.79■□□□□ 0.12
SCAF11-201ENST00000266589 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
SCAF11-201ENST00000266589 STK26Q9P289 416 aa15.79■□□□□ 0.12
SCAF11-201ENST00000266589 TMEM2Q9UHN6 1383 aa15.78■□□□□ 0.12
SCAF11-201ENST00000266589 RIMS1Q86UR5 1692 aaKnown RBP15.78■□□□□ 0.12
SCAF11-201ENST00000266589 RALBP1Q15311 655 aa15.78■□□□□ 0.12
SCAF11-201ENST00000266589 PARD3Q8TEW0 1356 aa15.77■□□□□ 0.12
SCAF11-201ENST00000266589 HDGFP51858 240 aaKnown RBP15.77■□□□□ 0.11
SCAF11-201ENST00000266589 TULP4Q9NRJ4 1543 aa15.76■□□□□ 0.11
SCAF11-201ENST00000266589 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
SCAF11-201ENST00000266589 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
SCAF11-201ENST00000266589 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCAF11-201ENST00000266589 FAM9BQ8IZU0 186 aa15.74■□□□□ 0.11
SCAF11-201ENST00000266589 ADAMTSL3P82987 1691 aa15.73■□□□□ 0.11
SCAF11-201ENST00000266589 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
SCAF11-201ENST00000266589 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
SCAF11-201ENST00000266589 DLC1Q96QB1 1528 aa15.73■□□□□ 0.11
SCAF11-201ENST00000266589 KNSTRNQ9Y448 316 aa15.73■□□□□ 0.11
SCAF11-201ENST00000266589 PRAM1Q96QH2 718 aa15.72■□□□□ 0.11
SCAF11-201ENST00000266589 LRPPRCP42704 1394 aaKnown RBP15.72■□□□□ 0.11
SCAF11-201ENST00000266589 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
SCAF11-201ENST00000266589 POGKQ9P215 609 aa15.71■□□□□ 0.11
SCAF11-201ENST00000266589 SLIT1O75093 1534 aa15.71■□□□□ 0.11
SCAF11-201ENST00000266589 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.1
SCAF11-201ENST00000266589 METP08581 1390 aa15.7■□□□□ 0.1
SCAF11-201ENST00000266589 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
SCAF11-201ENST00000266589 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
SCAF11-201ENST00000266589 BCANQ96GW7 911 aa15.7■□□□□ 0.1
SCAF11-201ENST00000266589 ARHGAP23Q9P227 1491 aa15.7■□□□□ 0.1
SCAF11-201ENST00000266589 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
SCAF11-201ENST00000266589 PUS7Q96PZ0 661 aaKnown RBP15.69■□□□□ 0.1
SCAF11-201ENST00000266589 LTKP29376 864 aa15.69■□□□□ 0.1
SCAF11-201ENST00000266589 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
SCAF11-201ENST00000266589 GTF3C3Q9Y5Q9 886 aa15.69■□□□□ 0.1
SCAF11-201ENST00000266589 MINK1Q8N4C8 1332 aaPredicted RBP15.69■□□□□ 0.1
SCAF11-201ENST00000266589 ABCC11Q96J66 1382 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms