RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MBD5Q9P267 1494 aa18.79■□□□□ 0.6
PDLIM2-201ENST00000265810 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-201ENST00000265810 NOS1P29475 1434 aa18.78■□□□□ 0.6
PDLIM2-201ENST00000265810 PZPP20742 1482 aa18.78■□□□□ 0.6
PDLIM2-201ENST00000265810 CDK19Q9BWU1 502 aa18.78■□□□□ 0.6
PDLIM2-201ENST00000265810 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-201ENST00000265810 RRP7AQ9Y3A4 280 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-201ENST00000265810 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
PDLIM2-201ENST00000265810 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
PDLIM2-201ENST00000265810 PSME1Q06323 249 aa18.75■□□□□ 0.59
PDLIM2-201ENST00000265810 ATP7AQ04656 1500 aa18.75■□□□□ 0.59
PDLIM2-201ENST00000265810 CABP1Q9NZU7 370 aa18.75■□□□□ 0.59
PDLIM2-201ENST00000265810 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
PDLIM2-201ENST00000265810 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
PDLIM2-201ENST00000265810 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-201ENST00000265810 TTC37Q6PGP7 1564 aa18.73■□□□□ 0.59
PDLIM2-201ENST00000265810 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
PDLIM2-201ENST00000265810 PPP4R2Q9NY27 417 aa18.73■□□□□ 0.59
PDLIM2-201ENST00000265810 PMFBP1Q8TBY8 1022 aa18.72■□□□□ 0.59
PDLIM2-201ENST00000265810 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-201ENST00000265810 C14orf93Q9H972 538 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-201ENST00000265810 APAF1O14727 1248 aa18.71■□□□□ 0.59
PDLIM2-201ENST00000265810 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
PDLIM2-201ENST00000265810 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
PDLIM2-201ENST00000265810 NEO1Q92859 1461 aa18.7■□□□□ 0.58
PDLIM2-201ENST00000265810 ATF3P18847 181 aa18.7■□□□□ 0.58
PDLIM2-201ENST00000265810 ARXQ96QS3 562 aa18.7■□□□□ 0.58
PDLIM2-201ENST00000265810 DIAPH1O60610 1272 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 MTHFSP49914 203 aa18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 PDE3BQ13370 1112 aa18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
PDLIM2-201ENST00000265810 TNRQ92752 1358 aa18.68■□□□□ 0.58
PDLIM2-201ENST00000265810 ARHGEF5Q12774 1597 aa18.68■□□□□ 0.58
PDLIM2-201ENST00000265810 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
PDLIM2-201ENST00000265810 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-201ENST00000265810 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
PDLIM2-201ENST00000265810 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
PDLIM2-201ENST00000265810 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
PDLIM2-201ENST00000265810 NLRP6P59044 892 aa18.66■□□□□ 0.58
PDLIM2-201ENST00000265810 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-201ENST00000265810 ADAMTS8Q9UP79 889 aa18.65■□□□□ 0.58
PDLIM2-201ENST00000265810 ATP10AO60312 1499 aa18.65■□□□□ 0.58
PDLIM2-201ENST00000265810 MS4A1P11836 297 aa18.64■□□□□ 0.57
PDLIM2-201ENST00000265810 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
PDLIM2-201ENST00000265810 SCAF11Q99590 1463 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-201ENST00000265810 ZMYM3Q14202 1370 aa18.62■□□□□ 0.57
PDLIM2-201ENST00000265810 YEATS2Q9ULM3 1422 aa18.62■□□□□ 0.57
PDLIM2-201ENST00000265810 AMOTL2Q9Y2J4 779 aa18.62■□□□□ 0.57
PDLIM2-201ENST00000265810 ATAD2Q6PL18 1390 aa18.62■□□□□ 0.57
PDLIM2-201ENST00000265810 NUDT16Q96DE0 195 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-201ENST00000265810 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
PDLIM2-201ENST00000265810 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
PDLIM2-201ENST00000265810 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
PDLIM2-201ENST00000265810 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
PDLIM2-201ENST00000265810 KDM6BO15054 1643 aa18.6■□□□□ 0.57
PDLIM2-201ENST00000265810 ARHGEF12Q9NZN5 1544 aa18.6■□□□□ 0.57
PDLIM2-201ENST00000265810 HMOX1P09601 288 aa18.6■□□□□ 0.57
PDLIM2-201ENST00000265810 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-201ENST00000265810 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
PDLIM2-201ENST00000265810 ABCC1P33527 1531 aa18.59■□□□□ 0.57
PDLIM2-201ENST00000265810 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-201ENST00000265810 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
PDLIM2-201ENST00000265810 DISP3Q9P2K9 1392 aa18.59■□□□□ 0.57
PDLIM2-201ENST00000265810 GCC2Q8IWJ2 1684 aa18.58■□□□□ 0.57
PDLIM2-201ENST00000265810 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
PDLIM2-201ENST00000265810 ADGBQ8N7X0 1667 aa18.57■□□□□ 0.56
PDLIM2-201ENST00000265810 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-201ENST00000265810 SMC4Q9NTJ3 1288 aa18.57■□□□□ 0.56
PDLIM2-201ENST00000265810 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
PDLIM2-201ENST00000265810 IPO8O15397 1037 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-201ENST00000265810 RGS3P49796 1198 aa18.56■□□□□ 0.56
PDLIM2-201ENST00000265810 RIPK4P57078 832 aa18.56■□□□□ 0.56
PDLIM2-201ENST00000265810 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
PDLIM2-201ENST00000265810 ELL2O00472 640 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-201ENST00000265810 NSD3Q9BZ95 1437 aa18.55■□□□□ 0.56
PDLIM2-201ENST00000265810 E9PSI1 815 aa18.55■□□□□ 0.56
PDLIM2-201ENST00000265810 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
PDLIM2-201ENST00000265810 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-201ENST00000265810 CDC42BPAQ5VT25 1732 aa18.55■□□□□ 0.56
PDLIM2-201ENST00000265810 CCDC9Q9Y3X0 531 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-201ENST00000265810 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-201ENST00000265810 RIMS2Q9UQ26 1411 aa18.54■□□□□ 0.56
PDLIM2-201ENST00000265810 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-201ENST00000265810 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
PDLIM2-201ENST00000265810 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-201ENST00000265810 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.56
PDLIM2-201ENST00000265810 CFAP65Q6ZU64 1925 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-201ENST00000265810 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
PDLIM2-201ENST00000265810 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
PDLIM2-201ENST00000265810 PLIN1O60240 522 aa18.51■□□□□ 0.55
PDLIM2-201ENST00000265810 TCP11L2Q8N4U5 519 aa18.51■□□□□ 0.55
PDLIM2-201ENST00000265810 MLH3Q9UHC1 1453 aa18.51■□□□□ 0.55
PDLIM2-201ENST00000265810 TESK2Q96S53 571 aa18.5■□□□□ 0.55
PDLIM2-201ENST00000265810 TSPOAP1O95153 1857 aa18.5■□□□□ 0.55
PDLIM2-201ENST00000265810 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
PDLIM2-201ENST00000265810 NPATQ14207 1427 aa18.5■□□□□ 0.55
PDLIM2-201ENST00000265810 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms