RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TMF1P82094 1093 aa23.03■■□□□ 1.28
CHKA-201ENST00000265689 MROH2AA6NES4 1674 aa23.02■■□□□ 1.28
CHKA-201ENST00000265689 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
CHKA-201ENST00000265689 KIF1BO60333 1816 aa22.99■■□□□ 1.27
CHKA-201ENST00000265689 IQGAP1P46940 1657 aa22.99■■□□□ 1.27
CHKA-201ENST00000265689 ADGRF5Q8IZF2 1346 aa22.99■■□□□ 1.27
CHKA-201ENST00000265689 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
CHKA-201ENST00000265689 SCAF11Q99590 1463 aaKnown RBP22.98■■□□□ 1.27
CHKA-201ENST00000265689 PER1O15534 1290 aaPredicted RBP22.98■■□□□ 1.27
CHKA-201ENST00000265689 BCANQ96GW7 911 aa22.98■■□□□ 1.27
CHKA-201ENST00000265689 NEFLP07196 543 aa22.97■■□□□ 1.27
CHKA-201ENST00000265689 RALBP1Q15311 655 aa22.97■■□□□ 1.27
CHKA-201ENST00000265689 CFAP70Q5T0N1 1121 aa22.96■■□□□ 1.27
CHKA-201ENST00000265689 TMC1Q8TDI8 760 aa22.96■■□□□ 1.27
CHKA-201ENST00000265689 MYOM2P54296 1465 aa22.95■■□□□ 1.27
CHKA-201ENST00000265689 ZBED9Q6R2W3 1325 aa22.95■■□□□ 1.27
CHKA-201ENST00000265689 ARHGEF40Q8TER5 1519 aa22.95■■□□□ 1.27
CHKA-201ENST00000265689 PANK3Q9H999 370 aa22.95■■□□□ 1.26
CHKA-201ENST00000265689 MYBBP1AQ9BQG0 1328 aaKnown RBP22.95■■□□□ 1.26
CHKA-201ENST00000265689 CLTCQ00610 1675 aaKnown RBP22.95■■□□□ 1.26
CHKA-201ENST00000265689 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
CHKA-201ENST00000265689 SYNMO15061 1565 aa22.94■■□□□ 1.26
CHKA-201ENST00000265689 PNISRQ8TF01 805 aaKnown RBP22.93■■□□□ 1.26
CHKA-201ENST00000265689 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
CHKA-201ENST00000265689 KIAA1210Q9ULL0 1709 aa22.92■■□□□ 1.26
CHKA-201ENST00000265689 IDI1Q13907 227 aa22.91■■□□□ 1.26
CHKA-201ENST00000265689 IFT172Q9UG01 1749 aa22.91■■□□□ 1.26
CHKA-201ENST00000265689 NOS1P29475 1434 aa22.9■■□□□ 1.26
CHKA-201ENST00000265689 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
CHKA-201ENST00000265689 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
CHKA-201ENST00000265689 MYO5BQ9ULV0 1848 aa22.9■■□□□ 1.26
CHKA-201ENST00000265689 CC2D1BQ5T0F9 858 aaKnown RBP22.88■■□□□ 1.25
CHKA-201ENST00000265689 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
CHKA-201ENST00000265689 EIF3AQ14152 1382 aaKnown RBP22.87■■□□□ 1.25
CHKA-201ENST00000265689 PREX1Q8TCU6 1659 aa22.86■■□□□ 1.25
CHKA-201ENST00000265689 SENP3-EIF4A1A0A087X0R7 540 aa22.85■■□□□ 1.25
CHKA-201ENST00000265689 ZC3H13Q5T200 1668 aaKnown RBP22.84■■□□□ 1.25
CHKA-201ENST00000265689 CEBPAP49715 358 aaPredicted RBP22.84■■□□□ 1.25
CHKA-201ENST00000265689 NLRP13Q86W25 1043 aa22.84■■□□□ 1.25
CHKA-201ENST00000265689 CDCA8Q53HL2 280 aa22.83■■□□□ 1.25
CHKA-201ENST00000265689 AGLP35573 1532 aa22.82■■□□□ 1.24
CHKA-201ENST00000265689 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
CHKA-201ENST00000265689 LRPPRCP42704 1394 aaKnown RBP22.82■■□□□ 1.24
CHKA-201ENST00000265689 PPLO60437 1756 aa22.81■■□□□ 1.24
CHKA-201ENST00000265689 IRX6P78412 446 aaPredicted RBP22.8■■□□□ 1.24
CHKA-201ENST00000265689 ARHGAP31Q2M1Z3 1444 aa22.8■■□□□ 1.24
CHKA-201ENST00000265689 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
CHKA-201ENST00000265689 PIK3C2GO75747 1445 aa22.79■■□□□ 1.24
CHKA-201ENST00000265689 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
CHKA-201ENST00000265689 TMEM132EQ6IEE7 984 aa22.79■■□□□ 1.24
CHKA-201ENST00000265689 ESF1Q9H501 851 aaKnown RBP22.77■■□□□ 1.24
CHKA-201ENST00000265689 C14orf93Q9H972 538 aaKnown RBP22.77■■□□□ 1.24
CHKA-201ENST00000265689 ERVK-7P63135 1459 aa22.77■■□□□ 1.24
CHKA-201ENST00000265689 KNSTRNQ9Y448 316 aa22.76■■□□□ 1.23
CHKA-201ENST00000265689 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
CHKA-201ENST00000265689 TRAK1Q9UPV9 953 aa22.74■■□□□ 1.23
CHKA-201ENST00000265689 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
CHKA-201ENST00000265689 MYOM1P52179 1685 aa22.73■■□□□ 1.23
CHKA-201ENST00000265689 AMER1Q5JTC6 1135 aaPredicted RBP22.72■■□□□ 1.23
CHKA-201ENST00000265689 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
CHKA-201ENST00000265689 KDM5AP29375 1690 aaKnown RBP22.72■■□□□ 1.23
CHKA-201ENST00000265689 SMG6Q86US8 1419 aaKnown RBP22.72■■□□□ 1.23
CHKA-201ENST00000265689 CENPJQ9HC77 1338 aaPredicted RBP22.71■■□□□ 1.23
CHKA-201ENST00000265689 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
CHKA-201ENST00000265689 ADGRB1O14514 1584 aa22.71■■□□□ 1.23
CHKA-201ENST00000265689 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
CHKA-201ENST00000265689 SLC52A1Q9NWF4 448 aa22.7■■□□□ 1.22
CHKA-201ENST00000265689 NEXMIFQ5QGS0 1516 aa22.7■■□□□ 1.22
CHKA-201ENST00000265689 MYO3AQ8NEV4 1616 aa22.7■■□□□ 1.22
CHKA-201ENST00000265689 VGFO15240 615 aaPredicted RBP22.7■■□□□ 1.22
CHKA-201ENST00000265689 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
CHKA-201ENST00000265689 SBNO2Q9Y2G9 1366 aa22.68■■□□□ 1.22
CHKA-201ENST00000265689 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
CHKA-201ENST00000265689 PPP2R1AP30153 589 aa22.65■■□□□ 1.22
CHKA-201ENST00000265689 SAFB2Q14151 953 aaKnown RBP eCLIP22.64■■□□□ 1.22
CHKA-201ENST00000265689 SALL2Q9Y467 1007 aaPredicted RBP22.64■■□□□ 1.21
CHKA-201ENST00000265689 SPATA31D1Q6ZQQ2 1576 aa22.63■■□□□ 1.21
CHKA-201ENST00000265689 STK26Q9P289 416 aa22.63■■□□□ 1.21
CHKA-201ENST00000265689 CARD14Q9BXL6 1004 aa22.62■■□□□ 1.21
CHKA-201ENST00000265689 QRICH2Q9H0J4 1663 aa22.61■■□□□ 1.21
CHKA-201ENST00000265689 PPP6R1Q9UPN7 881 aa22.61■■□□□ 1.21
CHKA-201ENST00000265689 NPC1L1Q9UHC9 1359 aa22.6■■□□□ 1.21
CHKA-201ENST00000265689 TSHZ2Q9NRE2 1034 aa22.59■■□□□ 1.21
CHKA-201ENST00000265689 ZFYVE9O95405 1425 aa22.59■■□□□ 1.21
CHKA-201ENST00000265689 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
CHKA-201ENST00000265689 FER1L4A9Z1Z3 1794 aa22.59■■□□□ 1.21
CHKA-201ENST00000265689 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.21
CHKA-201ENST00000265689 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
CHKA-201ENST00000265689 C3P01024 1663 aa22.57■■□□□ 1.2
CHKA-201ENST00000265689 ADAMTS8Q9UP79 889 aa22.56■■□□□ 1.2
CHKA-201ENST00000265689 TNRQ92752 1358 aa22.55■■□□□ 1.2
CHKA-201ENST00000265689 SLC12A5Q9H2X9 1139 aa22.55■■□□□ 1.2
CHKA-201ENST00000265689 INSRP06213 1382 aa22.55■■□□□ 1.2
CHKA-201ENST00000265689 MYT1Q01538 1121 aa22.54■■□□□ 1.2
CHKA-201ENST00000265689 PPP4R2Q9NY27 417 aa22.54■■□□□ 1.2
CHKA-201ENST00000265689 ARHGEF28Q8N1W1 1705 aaKnown RBP22.53■■□□□ 1.2
CHKA-201ENST00000265689 RNF123Q5XPI4 1314 aa22.52■■□□□ 1.2
CHKA-201ENST00000265689 RIMS2Q9UQ26 1411 aa22.51■■□□□ 1.19
CHKA-201ENST00000265689 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
CHKA-201ENST00000265689 EVC2Q86UK5 1308 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms