RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 C8orf34Q49A92 452 aa21.31■■□□□ 1
SRF-201ENST00000265354 RUNDC1Q96C34 613 aa21.3■■□□□ 1
SRF-201ENST00000265354 SPAG9O60271 1321 aaKnown RBP21.3■■□□□ 1
SRF-201ENST00000265354 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
SRF-201ENST00000265354 MRE11P49959 708 aa21.29■■□□□ 1
SRF-201ENST00000265354 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
SRF-201ENST00000265354 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
SRF-201ENST00000265354 ABCC5O15440 1437 aa21.28■■□□□ 1
SRF-201ENST00000265354 RIPK4P57078 832 aa21.28■■□□□ 1
SRF-201ENST00000265354 EXOSC9Q06265 439 aaKnown RBP21.28■■□□□ 1
SRF-201ENST00000265354 RNF214Q8ND24 703 aa21.28■■□□□ 1
SRF-201ENST00000265354 MCTP1Q6DN14 999 aa21.28■■□□□ 1
SRF-201ENST00000265354 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
SRF-201ENST00000265354 PDE3AQ14432 1141 aa21.27■■□□□ 1
SRF-201ENST00000265354 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
SRF-201ENST00000265354 NUTM2FA1L443 756 aa21.26■□□□□ 0.99
SRF-201ENST00000265354 KANK1Q14678 1352 aa21.26■□□□□ 0.99
SRF-201ENST00000265354 DDX19BQ9UMR2 479 aa21.25■□□□□ 0.99
SRF-201ENST00000265354 AFAP1Q8N556 730 aa21.25■□□□□ 0.99
SRF-201ENST00000265354 R3HCC1Q9Y3T6 440 aaKnown RBP21.25■□□□□ 0.99
SRF-201ENST00000265354 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
SRF-201ENST00000265354 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
SRF-201ENST00000265354 TRIM6-TRIM34B2RNG4 842 aa21.24■□□□□ 0.99
SRF-201ENST00000265354 RSPH4AQ5TD94 716 aa21.24■□□□□ 0.99
SRF-201ENST00000265354 EHBP1L1Q8N3D4 1523 aa21.23■□□□□ 0.99
SRF-201ENST00000265354 BCL11BQ9C0K0 894 aaPredicted RBP21.23■□□□□ 0.99
SRF-201ENST00000265354 CHMP4BQ9H444 224 aaKnown RBP21.23■□□□□ 0.99
SRF-201ENST00000265354 SPINK5Q9NQ38 1064 aaPredicted RBP21.23■□□□□ 0.99
SRF-201ENST00000265354 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
SRF-201ENST00000265354 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
SRF-201ENST00000265354 HMOX1P09601 288 aa21.23■□□□□ 0.99
SRF-201ENST00000265354 GRPEL1Q9HAV7 217 aa21.23■□□□□ 0.99
SRF-201ENST00000265354 EFCAB5A4FU69 1503 aa21.23■□□□□ 0.99
SRF-201ENST00000265354 EPRSP07814 1512 aaKnown RBP21.22■□□□□ 0.99
SRF-201ENST00000265354 NASPP49321 788 aaPredicted RBP21.22■□□□□ 0.99
SRF-201ENST00000265354 CAVIN1Q6NZI2 390 aaKnown RBP21.22■□□□□ 0.99
SRF-201ENST00000265354 ESPNB1AK53 854 aa21.21■□□□□ 0.99
SRF-201ENST00000265354 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
SRF-201ENST00000265354 KCNJ4P48050 445 aa21.2■□□□□ 0.98
SRF-201ENST00000265354 MINK1Q8N4C8 1332 aaPredicted RBP21.2■□□□□ 0.98
SRF-201ENST00000265354 TOPBP1Q92547 1522 aa21.2■□□□□ 0.98
SRF-201ENST00000265354 CABP2Q9NPB3 220 aa21.2■□□□□ 0.98
SRF-201ENST00000265354 MLECQ14165 292 aa21.2■□□□□ 0.98
SRF-201ENST00000265354 DISP3Q9P2K9 1392 aa21.19■□□□□ 0.98
SRF-201ENST00000265354 OS9Q13438 667 aaPredicted RBP21.19■□□□□ 0.98
SRF-201ENST00000265354 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
SRF-201ENST00000265354 RNF123Q5XPI4 1314 aa21.18■□□□□ 0.98
SRF-201ENST00000265354 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
SRF-201ENST00000265354 KIAA2012Q0VF49 1180 aa21.18■□□□□ 0.98
SRF-201ENST00000265354 MAPK8IP2Q13387 824 aaPredicted RBP21.18■□□□□ 0.98
SRF-201ENST00000265354 DRC7Q8IY82 874 aa21.18■□□□□ 0.98
SRF-201ENST00000265354 PCDHB15Q9Y5E8 787 aa21.18■□□□□ 0.98
SRF-201ENST00000265354 ERBINQ96RT1 1412 aa21.18■□□□□ 0.98
SRF-201ENST00000265354 XRCC6P12956 609 aaKnown RBP eCLIP21.18■□□□□ 0.98
SRF-201ENST00000265354 HDGFL2Q7Z4V5 671 aaPredicted RBP21.17■□□□□ 0.98
SRF-201ENST00000265354 RILPL2Q969X0 211 aa21.17■□□□□ 0.98
SRF-201ENST00000265354 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
SRF-201ENST00000265354 SKOR2Q2VWA4 1001 aaPredicted RBP21.16■□□□□ 0.98
SRF-201ENST00000265354 PDE4CQ08493 712 aa21.15■□□□□ 0.98
SRF-201ENST00000265354 RARSP54136 660 aaKnown RBP21.15■□□□□ 0.98
SRF-201ENST00000265354 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
SRF-201ENST00000265354 ST18O60284 1047 aa21.15■□□□□ 0.98
SRF-201ENST00000265354 NAP1L2Q9ULW6 460 aaPredicted RBP21.14■□□□□ 0.97
SRF-201ENST00000265354 GOLGA6L4A6NEF3 574 aa21.13■□□□□ 0.97
SRF-201ENST00000265354 PRPF40AO75400 957 aaKnown RBP21.13■□□□□ 0.97
SRF-201ENST00000265354 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
SRF-201ENST00000265354 RRAGDQ9NQL2 400 aaPredicted RBP21.13■□□□□ 0.97
SRF-201ENST00000265354 PLEKHH1Q9ULM0 1364 aa21.13■□□□□ 0.97
SRF-201ENST00000265354 PER1O15534 1290 aaPredicted RBP21.13■□□□□ 0.97
SRF-201ENST00000265354 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
SRF-201ENST00000265354 PTPRGP23470 1445 aa21.12■□□□□ 0.97
SRF-201ENST00000265354 KIAA1211Q6ZU35 1233 aa21.12■□□□□ 0.97
SRF-201ENST00000265354 ROCK1Q13464 1354 aa21.12■□□□□ 0.97
SRF-201ENST00000265354 MCCP23508 829 aa21.12■□□□□ 0.97
SRF-201ENST00000265354 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
SRF-201ENST00000265354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.11■□□□□ 0.97
SRF-201ENST00000265354 DMRT2Q9Y5R5 561 aa21.11■□□□□ 0.97
SRF-201ENST00000265354 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
SRF-201ENST00000265354 PTMSP20962 102 aa21.1■□□□□ 0.97
SRF-201ENST00000265354 TNNT3P45378 269 aaPredicted RBP21.1■□□□□ 0.97
SRF-201ENST00000265354 CHAF1AQ13111 956 aaPredicted RBP21.1■□□□□ 0.97
SRF-201ENST00000265354 RLBP1P12271 317 aa21.09■□□□□ 0.97
SRF-201ENST00000265354 THUMPD2Q9BTF0 503 aaKnown RBP21.09■□□□□ 0.97
SRF-201ENST00000265354 DIAPH1O60610 1272 aaKnown RBP21.09■□□□□ 0.97
SRF-201ENST00000265354 TMEM57Q8N5G2 664 aa21.09■□□□□ 0.97
SRF-201ENST00000265354 FGD1P98174 961 aa21.07■□□□□ 0.96
SRF-201ENST00000265354 ATF7IPQ6VMQ6 1270 aa21.06■□□□□ 0.96
SRF-201ENST00000265354 TROQ12816 1431 aaPredicted RBP21.06■□□□□ 0.96
SRF-201ENST00000265354 LRPPRCP42704 1394 aaKnown RBP21.06■□□□□ 0.96
SRF-201ENST00000265354 SSH1Q8WYL5 1049 aa21.06■□□□□ 0.96
SRF-201ENST00000265354 TBC1D32Q96NH3 1257 aa21.05■□□□□ 0.96
SRF-201ENST00000265354 NGEFQ8N5V2 710 aa21.05■□□□□ 0.96
SRF-201ENST00000265354 RTF1Q92541 710 aaKnown RBP21.05■□□□□ 0.96
SRF-201ENST00000265354 TNPO1Q92973 898 aaKnown RBP21.04■□□□□ 0.96
SRF-201ENST00000265354 ANO2Q9NQ90 1003 aa21.04■□□□□ 0.96
SRF-201ENST00000265354 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
SRF-201ENST00000265354 TESK2Q96S53 571 aa21.03■□□□□ 0.96
SRF-201ENST00000265354 EVC2Q86UK5 1308 aa21.03■□□□□ 0.96
SRF-201ENST00000265354 SSFA2P28290 1259 aa21.02■□□□□ 0.96
SRF-201ENST00000265354 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms