RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 XBP1P17861 261 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 PCMTD1Q96MG8 357 aaPredicted RBP6.58□□□□□ -1.36
XRN1-201ENST00000264951 RGL3Q3MIN7 710 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 CECR2Q9BXF3 1484 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 BRMS1Q9HCU9 246 aa6.58□□□□□ -1.36
XRN1-201ENST00000264951 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
XRN1-201ENST00000264951 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 DDX19BQ9UMR2 479 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 KIF15Q9NS87 1388 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 E9PSI1 815 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 TRDNQ13061 729 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 FILIP1LQ4L180 1135 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 JMYQ8N9B5 988 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 TXLNAP40222 546 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 CREBRFQ8IUR6 639 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 TAOK2Q9UL54 1235 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 KIF3BO15066 747 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 U2AF1L5P0DN76 240 aaPredicted RBP6.57□□□□□ -1.36
XRN1-201ENST00000264951 U2AF1Q01081 240 aaKnown RBP eCLIP6.57□□□□□ -1.36
XRN1-201ENST00000264951 CC2D1BQ5T0F9 858 aaKnown RBP6.57□□□□□ -1.36
XRN1-201ENST00000264951 SLC26A8Q96RN1 970 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.57□□□□□ -1.36
XRN1-201ENST00000264951 PDE4AP27815 886 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 ZNHIT6Q9NWK9 470 aaKnown RBP6.57□□□□□ -1.36
XRN1-201ENST00000264951 CALCOCO1Q9P1Z2 691 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 BICD2Q8TD16 824 aa6.57□□□□□ -1.36
XRN1-201ENST00000264951 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
XRN1-201ENST00000264951 R3HCC1Q9Y3T6 440 aaKnown RBP6.56□□□□□ -1.36
XRN1-201ENST00000264951 GIMAP7Q8NHV1 300 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 PODXL2Q9NZ53 605 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 DACH1Q9UI36 760 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 ANKRD30AQ9BXX3 1397 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 AXDND1Q5T1B0 1012 aaPredicted RBP6.56□□□□□ -1.36
XRN1-201ENST00000264951 KRI1Q8N9T8 703 aaKnown RBP6.56□□□□□ -1.36
XRN1-201ENST00000264951 PPM1EQ8WY54 764 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 DHX16O60231 1041 aaKnown RBP6.56□□□□□ -1.36
XRN1-201ENST00000264951 ZKSCAN2Q63HK3 967 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 SRPK2P78362 688 aaKnown RBP6.56□□□□□ -1.36
XRN1-201ENST00000264951 HSP90AB3PQ58FF7 597 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 MICALCLQ6ZW33 695 aa6.56□□□□□ -1.36
XRN1-201ENST00000264951 CCDC43Q96MW1 224 aaKnown RBP6.56□□□□□ -1.36
XRN1-201ENST00000264951 SCRIBQ14160 1630 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 INTS3Q68E01 1043 aaKnown RBP6.55□□□□□ -1.36
XRN1-201ENST00000264951 PSMA5P28066 241 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 UACAQ9BZF9 1416 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 ERC2O15083 957 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 EPS15P42566 896 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 ARHGAP35Q9NRY4 1499 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 HSP90AB2PQ58FF8 381 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.366e-7■■■■■ 127.6
XRN1-201ENST00000264951 SEPT7Q16181 437 aaKnown RBP6.55□□□□□ -1.36
XRN1-201ENST00000264951 LUZP1Q86V48 1076 aa6.55□□□□□ -1.36
XRN1-201ENST00000264951 API5Q9BZZ5 524 aaKnown RBP6.55□□□□□ -1.36
XRN1-201ENST00000264951 KINO60870 393 aaKnown RBP6.54□□□□□ -1.36
XRN1-201ENST00000264951 DESP17661 470 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 STAC3Q96MF2 364 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 CBFA2T2O43439 604 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 NAP1L1P55209 391 aaKnown RBP6.54□□□□□ -1.36
XRN1-201ENST00000264951 CCDC91Q7Z6B0 441 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 SMC3Q9UQE7 1217 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 AEBP2Q6ZN18 517 aaPredicted RBP6.54□□□□□ -1.36
XRN1-201ENST00000264951 ERICH2A1L162 156 aa6.54□□□□□ -1.36
XRN1-201ENST00000264951 HIRIP3Q9BW71 556 aaPredicted RBP6.54□□□□□ -1.36
XRN1-201ENST00000264951 MYBBP1AQ9BQG0 1328 aaKnown RBP6.54□□□□□ -1.36
XRN1-201ENST00000264951 HIP1O00291 1037 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 VPS53Q5VIR6 699 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 DCAF11Q8TEB1 546 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 NINLQ9Y2I6 1382 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 CFAP57Q96MR6 1250 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 STAMBPO95630 424 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 CWC22Q9HCG8 908 aaKnown RBP6.53□□□□□ -1.36
XRN1-201ENST00000264951 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
XRN1-201ENST00000264951 FMN1Q68DA7 1419 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 WASHC2AQ641Q2 1341 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 SHTN1A0MZ66 631 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
XRN1-201ENST00000264951 STIM1Q13586 685 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 TOMM22Q9NS69 142 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.53□□□□□ -1.36
XRN1-201ENST00000264951 V9GYY5 206 aaPredicted RBP6.53□□□□□ -1.36
XRN1-201ENST00000264951 POTEB2H3BUK9 544 aa6.53□□□□□ -1.36
XRN1-201ENST00000264951 PABPN1Q86U42 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
XRN1-201ENST00000264951 ZNF396Q96N95 335 aaPredicted RBP6.53□□□□□ -1.36
XRN1-201ENST00000264951 CTR9Q6PD62 1173 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 WRNQ14191 1432 aaPredicted RBP eCLIP6.52□□□□□ -1.37
XRN1-201ENST00000264951 SDF4Q9BRK5 362 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 TTLL5Q6EMB2 1281 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 DDX12PQ92771 950 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 SETSIPP0DME0 302 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 CCDC192P0DO97 292 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 SYCP1Q15431 976 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 CLASRPQ8N2M8 674 aaKnown RBP6.52□□□□□ -1.37
XRN1-201ENST00000264951 G3V3G9 751 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 DCAF8Q5TAQ9 597 aa6.52□□□□□ -1.37
XRN1-201ENST00000264951 LMOD2Q6P5Q4 547 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms