RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
DNMT3A-201ENST00000264709 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
DNMT3A-201ENST00000264709 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
DNMT3A-201ENST00000264709 MCM2P49736 904 aa14.36□□□□□ -0.11
DNMT3A-201ENST00000264709 TEX35Q5T0J7 233 aa14.36□□□□□ -0.11
DNMT3A-201ENST00000264709 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
DNMT3A-201ENST00000264709 LETM1O95202 739 aaPredicted RBP14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 U2AF1L5P0DN76 240 aaPredicted RBP14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 KCNJ4P48050 445 aa14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 U2AF1Q01081 240 aaKnown RBP eCLIP14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 PANK3Q9H999 370 aa14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 GOLGA6L1Q8N7Z2 621 aa14.35□□□□□ -0.11
DNMT3A-201ENST00000264709 SENP3-EIF4A1A0A087X0R7 540 aa14.34□□□□□ -0.11
DNMT3A-201ENST00000264709 POLR1AO95602 1720 aaPredicted RBP14.34□□□□□ -0.11
DNMT3A-201ENST00000264709 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
DNMT3A-201ENST00000264709 INSRP06213 1382 aa14.34□□□□□ -0.11
DNMT3A-201ENST00000264709 DZIP1LQ8IYY4 767 aaKnown RBP14.33□□□□□ -0.11
DNMT3A-201ENST00000264709 TERF2IPQ9NYB0 399 aa14.33□□□□□ -0.11
DNMT3A-201ENST00000264709 GRPEL1Q9HAV7 217 aa14.33□□□□□ -0.11
DNMT3A-201ENST00000264709 RABEP1Q15276 862 aa14.33□□□□□ -0.12
DNMT3A-201ENST00000264709 A0A0U1RQG5 324 aaPredicted RBP14.33□□□□□ -0.12
DNMT3A-201ENST00000264709 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.12
DNMT3A-201ENST00000264709 GPATCH3Q96I76 525 aa14.33□□□□□ -0.12
DNMT3A-201ENST00000264709 FGD1P98174 961 aa14.32□□□□□ -0.12
DNMT3A-201ENST00000264709 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-201ENST00000264709 SLC4A3P48751 1232 aa14.32□□□□□ -0.12
DNMT3A-201ENST00000264709 ARHGEF12Q9NZN5 1544 aa14.32□□□□□ -0.12
DNMT3A-201ENST00000264709 CLCN1P35523 988 aa14.32□□□□□ -0.12
DNMT3A-201ENST00000264709 PLIN1O60240 522 aa14.32□□□□□ -0.12
DNMT3A-201ENST00000264709 CAVIN1Q6NZI2 390 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-201ENST00000264709 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
DNMT3A-201ENST00000264709 MCM4P33991 863 aa14.3□□□□□ -0.12
DNMT3A-201ENST00000264709 CWC22Q9HCG8 908 aaKnown RBP14.3□□□□□ -0.12
DNMT3A-201ENST00000264709 PDCL2Q8N4E4 241 aa14.3□□□□□ -0.12
DNMT3A-201ENST00000264709 CCDC141Q6ZP82 1450 aa14.3□□□□□ -0.12
DNMT3A-201ENST00000264709 ZNF428Q96B54 188 aa14.29□□□□□ -0.12
DNMT3A-201ENST00000264709 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
DNMT3A-201ENST00000264709 HS1BP3Q53T59 392 aa14.29□□□□□ -0.12
DNMT3A-201ENST00000264709 ARGLU1Q9NWB6 273 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-201ENST00000264709 TSPYL1Q9H0U9 437 aa14.28□□□□□ -0.12
DNMT3A-201ENST00000264709 ZNF771Q7L3S4 317 aaPredicted RBP14.28□□□□□ -0.12
DNMT3A-201ENST00000264709 CWC15Q9P013 229 aaKnown RBP14.28□□□□□ -0.12
DNMT3A-201ENST00000264709 RUNDC1Q96C34 613 aa14.28□□□□□ -0.12
DNMT3A-201ENST00000264709 INTS3Q68E01 1043 aaKnown RBP14.27□□□□□ -0.12
DNMT3A-201ENST00000264709 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.12
DNMT3A-201ENST00000264709 ANKRD30BQ9BXX2 1392 aa14.27□□□□□ -0.12
DNMT3A-201ENST00000264709 COG6Q9Y2V7 657 aa14.27□□□□□ -0.12
DNMT3A-201ENST00000264709 KIF14Q15058 1648 aa14.27□□□□□ -0.13
DNMT3A-201ENST00000264709 DAPK1P53355 1430 aa14.26□□□□□ -0.13
DNMT3A-201ENST00000264709 SPAG9O60271 1321 aaKnown RBP14.26□□□□□ -0.13
DNMT3A-201ENST00000264709 ZMYM3Q14202 1370 aa14.26□□□□□ -0.13
DNMT3A-201ENST00000264709 POGKQ9P215 609 aa14.26□□□□□ -0.13
DNMT3A-201ENST00000264709 CDC45O75419 566 aa14.25□□□□□ -0.13
DNMT3A-201ENST00000264709 OS9Q13438 667 aaPredicted RBP14.25□□□□□ -0.13
DNMT3A-201ENST00000264709 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
DNMT3A-201ENST00000264709 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
DNMT3A-201ENST00000264709 IQGAP2Q13576 1575 aa14.24□□□□□ -0.13
DNMT3A-201ENST00000264709 DYNC1I1O14576 645 aa14.24□□□□□ -0.13
DNMT3A-201ENST00000264709 GOLGA6L19H0YKK7 550 aa14.24□□□□□ -0.13
DNMT3A-201ENST00000264709 SETQ01105 290 aaPredicted RBP14.24□□□□□ -0.13
DNMT3A-201ENST00000264709 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
DNMT3A-201ENST00000264709 RALGAPBQ86X10 1494 aa14.23□□□□□ -0.13
DNMT3A-201ENST00000264709 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
DNMT3A-201ENST00000264709 NESP48681 1621 aa14.22□□□□□ -0.13
DNMT3A-201ENST00000264709 CCP110O43303 1012 aa14.22□□□□□ -0.13
DNMT3A-201ENST00000264709 ZMYM4Q5VZL5 1548 aa14.22□□□□□ -0.13
DNMT3A-201ENST00000264709 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
DNMT3A-201ENST00000264709 EFCAB2Q5VUJ9 269 aa14.22□□□□□ -0.13
DNMT3A-201ENST00000264709 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
DNMT3A-201ENST00000264709 PDCP20941 246 aa14.21□□□□□ -0.13
DNMT3A-201ENST00000264709 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.13
DNMT3A-201ENST00000264709 TERF1P54274 439 aa14.21□□□□□ -0.14
DNMT3A-201ENST00000264709 APAF1O14727 1248 aa14.21□□□□□ -0.14
DNMT3A-201ENST00000264709 GCC1Q96CN9 775 aa14.21□□□□□ -0.14
DNMT3A-201ENST00000264709 PLEKHH1Q9ULM0 1364 aa14.21□□□□□ -0.14
DNMT3A-201ENST00000264709 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
DNMT3A-201ENST00000264709 ERBINQ96RT1 1412 aa14.2□□□□□ -0.14
DNMT3A-201ENST00000264709 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
DNMT3A-201ENST00000264709 GPRASP1Q5JY77 1395 aa14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 KIF2AO00139 706 aaPredicted RBP14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 EVC2Q86UK5 1308 aa14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 CALRP27797 417 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 NAT10Q9H0A0 1025 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 R3HCC1Q9Y3T6 440 aaKnown RBP14.19□□□□□ -0.14
DNMT3A-201ENST00000264709 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 ANKRD45Q5TZF3 282 aa14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 C14orf37Q86TY3 774 aa14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 RUFY2Q8WXA3 655 aa14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 SRPK2P78362 688 aaKnown RBP14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 TROQ12816 1431 aaPredicted RBP14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
DNMT3A-201ENST00000264709 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 BECN2A8MW95 431 aa14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 ARID3AQ99856 593 aa14.17□□□□□ -0.14
DNMT3A-201ENST00000264709 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms