RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 E9PSI1 815 aa20.66■□□□□ 0.9
PDZRN3-201ENST00000263666 SAMD9Q5K651 1589 aa20.64■□□□□ 0.89
PDZRN3-201ENST00000263666 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
PDZRN3-201ENST00000263666 MTHFSP49914 203 aa20.61■□□□□ 0.89
PDZRN3-201ENST00000263666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDZRN3-201ENST00000263666 TCP11L2Q8N4U5 519 aa20.61■□□□□ 0.89
PDZRN3-201ENST00000263666 PER1O15534 1290 aaPredicted RBP20.61■□□□□ 0.89
PDZRN3-201ENST00000263666 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
PDZRN3-201ENST00000263666 PLEKHH2Q8IVE3 1493 aa20.61■□□□□ 0.89
PDZRN3-201ENST00000263666 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
PDZRN3-201ENST00000263666 TESK2Q96S53 571 aa20.6■□□□□ 0.89
PDZRN3-201ENST00000263666 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
PDZRN3-201ENST00000263666 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
PDZRN3-201ENST00000263666 TSR2Q969E8 191 aaKnown RBP20.59■□□□□ 0.89
PDZRN3-201ENST00000263666 GGNBP2Q9H3C7 697 aa20.59■□□□□ 0.89
PDZRN3-201ENST00000263666 EIF3AQ14152 1382 aaKnown RBP20.59■□□□□ 0.89
PDZRN3-201ENST00000263666 ATP10BO94823 1461 aa20.59■□□□□ 0.89
PDZRN3-201ENST00000263666 KDM5BQ9UGL1 1544 aa20.59■□□□□ 0.89
PDZRN3-201ENST00000263666 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.89
PDZRN3-201ENST00000263666 CABP2Q9NPB3 220 aa20.58■□□□□ 0.89
PDZRN3-201ENST00000263666 HDGFP51858 240 aaKnown RBP20.58■□□□□ 0.89
PDZRN3-201ENST00000263666 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.89
PDZRN3-201ENST00000263666 MINK1Q8N4C8 1332 aaPredicted RBP20.57■□□□□ 0.88
PDZRN3-201ENST00000263666 DISP1Q96F81 1524 aa20.57■□□□□ 0.88
PDZRN3-201ENST00000263666 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
PDZRN3-201ENST00000263666 SLFN5Q08AF3 891 aa20.56■□□□□ 0.88
PDZRN3-201ENST00000263666 NUTM2FA1L443 756 aa20.55■□□□□ 0.88
PDZRN3-201ENST00000263666 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
PDZRN3-201ENST00000263666 NUP160Q12769 1436 aa20.55■□□□□ 0.88
PDZRN3-201ENST00000263666 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
PDZRN3-201ENST00000263666 ZBTB7CA1YPR0 619 aa20.54■□□□□ 0.88
PDZRN3-201ENST00000263666 RALGAPBQ86X10 1494 aa20.54■□□□□ 0.88
PDZRN3-201ENST00000263666 MYH16Q9H6N6 1097 aa20.54■□□□□ 0.88
PDZRN3-201ENST00000263666 TNNQ9UQP3 1299 aa20.54■□□□□ 0.88
PDZRN3-201ENST00000263666 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
PDZRN3-201ENST00000263666 PLEKHH1Q9ULM0 1364 aa20.53■□□□□ 0.88
PDZRN3-201ENST00000263666 IGHDP01880 384 aa20.53■□□□□ 0.88
PDZRN3-201ENST00000263666 NAP1L5Q96NT1 182 aaPredicted RBP20.53■□□□□ 0.88
PDZRN3-201ENST00000263666 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
PDZRN3-201ENST00000263666 CCDC141Q6ZP82 1450 aa20.52■□□□□ 0.87
PDZRN3-201ENST00000263666 HSCBQ8IWL3 235 aa20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 KIF14Q15058 1648 aa20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 PARD3Q8TEW0 1356 aa20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
PDZRN3-201ENST00000263666 ADGRF5Q8IZF2 1346 aa20.5■□□□□ 0.87
PDZRN3-201ENST00000263666 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
PDZRN3-201ENST00000263666 CD109Q6YHK3 1445 aa20.49■□□□□ 0.87
PDZRN3-201ENST00000263666 RUNDC1Q96C34 613 aa20.49■□□□□ 0.87
PDZRN3-201ENST00000263666 LNPKQ9C0E8 428 aa20.49■□□□□ 0.87
PDZRN3-201ENST00000263666 LRPPRCP42704 1394 aaKnown RBP20.49■□□□□ 0.87
PDZRN3-201ENST00000263666 GCC2Q8IWJ2 1684 aa20.49■□□□□ 0.87
PDZRN3-201ENST00000263666 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
PDZRN3-201ENST00000263666 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
PDZRN3-201ENST00000263666 WWC1Q8IX03 1113 aa20.48■□□□□ 0.87
PDZRN3-201ENST00000263666 ZKSCAN2Q63HK3 967 aa20.47■□□□□ 0.87
PDZRN3-201ENST00000263666 LMOD2Q6P5Q4 547 aa20.46■□□□□ 0.87
PDZRN3-201ENST00000263666 HMOX1P09601 288 aa20.46■□□□□ 0.87
PDZRN3-201ENST00000263666 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
PDZRN3-201ENST00000263666 LRRIQ1Q96JM4 1722 aa20.45■□□□□ 0.86
PDZRN3-201ENST00000263666 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
PDZRN3-201ENST00000263666 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
PDZRN3-201ENST00000263666 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
PDZRN3-201ENST00000263666 RIPK4P57078 832 aa20.44■□□□□ 0.86
PDZRN3-201ENST00000263666 ANP32BQ92688 251 aaKnown RBP20.43■□□□□ 0.86
PDZRN3-201ENST00000263666 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
PDZRN3-201ENST00000263666 ANKRD45Q5TZF3 282 aa20.43■□□□□ 0.86
PDZRN3-201ENST00000263666 SEC24BO95487 1268 aa20.42■□□□□ 0.86
PDZRN3-201ENST00000263666 BCORL1Q5H9F3 1711 aa20.41■□□□□ 0.86
PDZRN3-201ENST00000263666 FBLN1P23142 703 aa20.41■□□□□ 0.86
PDZRN3-201ENST00000263666 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
PDZRN3-201ENST00000263666 C8orf34Q49A92 452 aa20.4■□□□□ 0.86
PDZRN3-201ENST00000263666 EID1Q9Y6B2 187 aa20.4■□□□□ 0.86
PDZRN3-201ENST00000263666 FAM135AQ9P2D6 1515 aa20.4■□□□□ 0.86
PDZRN3-201ENST00000263666 FOXD4L5Q5VV16 416 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-201ENST00000263666 FOXD4L4Q8WXT5 416 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-201ENST00000263666 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.85
PDZRN3-201ENST00000263666 SYCP2Q9BX26 1530 aa20.38■□□□□ 0.85
PDZRN3-201ENST00000263666 ADGRL1O94910 1474 aa20.38■□□□□ 0.85
PDZRN3-201ENST00000263666 CARD14Q9BXL6 1004 aa20.38■□□□□ 0.85
PDZRN3-201ENST00000263666 EVC2Q86UK5 1308 aa20.37■□□□□ 0.85
PDZRN3-201ENST00000263666 GOLGA6L3A6NEY3 463 aa20.37■□□□□ 0.85
PDZRN3-201ENST00000263666 IPO8O15397 1037 aaKnown RBP20.36■□□□□ 0.85
PDZRN3-201ENST00000263666 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
PDZRN3-201ENST00000263666 ASXL2Q76L83 1435 aa20.36■□□□□ 0.85
PDZRN3-201ENST00000263666 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
PDZRN3-201ENST00000263666 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
PDZRN3-201ENST00000263666 C22orf23Q9BZE7 217 aa20.36■□□□□ 0.85
PDZRN3-201ENST00000263666 PDE3AQ14432 1141 aa20.35■□□□□ 0.85
PDZRN3-201ENST00000263666 A2MP01023 1474 aa20.35■□□□□ 0.85
PDZRN3-201ENST00000263666 PCDHB15Q9Y5E8 787 aa20.35■□□□□ 0.85
PDZRN3-201ENST00000263666 FANCAO15360 1455 aa20.35■□□□□ 0.85
PDZRN3-201ENST00000263666 RLBP1P12271 317 aa20.35■□□□□ 0.85
PDZRN3-201ENST00000263666 RARSP54136 660 aaKnown RBP20.35■□□□□ 0.85
PDZRN3-201ENST00000263666 TERF2IPQ9NYB0 399 aa20.34■□□□□ 0.85
PDZRN3-201ENST00000263666 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.84
PDZRN3-201ENST00000263666 L1TD1Q5T7N2 865 aaKnown RBP20.33■□□□□ 0.84
PDZRN3-201ENST00000263666 NOB1Q9ULX3 412 aaKnown RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms